| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545518
Identifier: 17545518
GI number: 17545518
Start: 845358
End: 846398
Strand: Direct
Name: 17545518
Synonym: RSc0799
Alternate gene names: NA
Gene position: 845358-846398 (Clockwise)
Preceding gene: 17545517
Following gene: 17545519
Centisome position: 22.75
GC content: 68.97
Gene sequence:
>1041_bases ATGACCCATGCCCCGACCACGACGCCCCTGCGCACCGCCGCCAAGCTGCTCGCCGCCGGCGCGGCGGCGCTGACCCTGAA CAGCTGCGCCTACGATGGCATCAAGGTCATCGTCATCAACATGTTCCAGGGCGAAGCCCAGCCGTTCATCGATCGCTACG ACCTCAAGGAGAAGGTCTATATCGCCGGCCTGTCGCCCGACGCGCCGAACCTGCTGTGCAACTACGACGGCATCTGCCAG GTCACCACCGGCATGGGCTACGCCAACGCCGCCGCGACGCTGTCCGCGCTGCTCTACCGCAGCAAGCTGGACCTGACGCA GACCTATTTCGTGATCGCCGGCATCGCGGGCATCGATCCGGGGCAGGGCACGGTGGGCTCGGCCGCGTGGGCGCGCTATG CGGTGGACTACGGCCTGTCGCACGAGATCGACGCGCGCGAGATGCCCGCCGCCTGGCCCTACGGCTACTTCGGCATCGGC ACCAAGGGGCCGGGCGAGAAGCCGCCGATGAACTACCGCACCGAAGTGTTCCGGCTCAACGAGGCGCTGCTGCAGAGGGC GTACGCGCTGTCGAAGCCGGTCACGCTGGAGGACAGCCCCGAAGCGATCGCCTTCCGCAAGCACTACGCGTACGCGCCGG CCAACCAGCCGCCCGCGGTGATCCAGTGCGATGTCGCCTCCGCCGATACCTGGTGGGCCGGCCGCAACCTGGGCCAGCGC GCGCGTGACTGGACCAAGACCATGACCGACGGCAAGGGCACCTACTGCACCACCGCGCAAGAGGACAACGCCACGCTGGA AGTGCTGGCGCGCGGCGCCCGCGCCGGCAAGGTCGATTTCAGCCGCGTCGCGCTGCTGCGTACCGGCTCGGACTTCGACC GCCCGTACGACGGCCAGTCCGCCGCCGACGGCCTGGTCAACTACGCGCAGCAGGGCGGCTTCGTGCCGGCCACGCACAAC CTCGTCAATGCCGCCAAGCCGCTGCTGGACGACATCGTGTTGCGCTGGCCGCAATGGGCGCAGGGGGTGCCGGCGAATTA A
Upstream 100 bases:
>100_bases GCTTTGTGCCGTCGCTCAACAACCTCTATCTGGCGGGCGGCCCGCTGGTCAACGACATCGTCACGCGCTGGAGCGTGTGG AAACACGGAGTGCCCTCGCC
Downstream 100 bases:
>100_bases CCATTGCTTACATCTCATCTATCACTTTATAATGAGAACCATTCTCATCTGATGGGCGGCAAAGGGTATCCTGCCTGAGC GCTGGCCATCGTTCCTGCCG
Product: purine nucleoside permease
Products: NA
Alternate protein names: Purine Nucleoside Permease Protein; Purine Nucleoside Permease Family Protein; CNT Family Concentrative Nucleoside/H+ Anitporter; Purine Nucleoside Permease Family; Purine Nucleoside Permease-Like Protein; NUP-Family Purine Nucleoside Permease; Purine Nucleoside Transporter; Inosine/Uridine-Preferring Nucleoside Hydrolase; Lipoprotein
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MTHAPTTTPLRTAAKLLAAGAAALTLNSCAYDGIKVIVINMFQGEAQPFIDRYDLKEKVYIAGLSPDAPNLLCNYDGICQ VTTGMGYANAAATLSALLYRSKLDLTQTYFVIAGIAGIDPGQGTVGSAAWARYAVDYGLSHEIDAREMPAAWPYGYFGIG TKGPGEKPPMNYRTEVFRLNEALLQRAYALSKPVTLEDSPEAIAFRKHYAYAPANQPPAVIQCDVASADTWWAGRNLGQR ARDWTKTMTDGKGTYCTTAQEDNATLEVLARGARAGKVDFSRVALLRTGSDFDRPYDGQSAADGLVNYAQQGGFVPATHN LVNAAKPLLDDIVLRWPQWAQGVPAN
Sequences:
>Translated_346_residues MTHAPTTTPLRTAAKLLAAGAAALTLNSCAYDGIKVIVINMFQGEAQPFIDRYDLKEKVYIAGLSPDAPNLLCNYDGICQ VTTGMGYANAAATLSALLYRSKLDLTQTYFVIAGIAGIDPGQGTVGSAAWARYAVDYGLSHEIDAREMPAAWPYGYFGIG TKGPGEKPPMNYRTEVFRLNEALLQRAYALSKPVTLEDSPEAIAFRKHYAYAPANQPPAVIQCDVASADTWWAGRNLGQR ARDWTKTMTDGKGTYCTTAQEDNATLEVLARGARAGKVDFSRVALLRTGSDFDRPYDGQSAADGLVNYAQQGGFVPATHN LVNAAKPLLDDIVLRWPQWAQGVPAN >Mature_345_residues THAPTTTPLRTAAKLLAAGAAALTLNSCAYDGIKVIVINMFQGEAQPFIDRYDLKEKVYIAGLSPDAPNLLCNYDGICQV TTGMGYANAAATLSALLYRSKLDLTQTYFVIAGIAGIDPGQGTVGSAAWARYAVDYGLSHEIDAREMPAAWPYGYFGIGT KGPGEKPPMNYRTEVFRLNEALLQRAYALSKPVTLEDSPEAIAFRKHYAYAPANQPPAVIQCDVASADTWWAGRNLGQRA RDWTKTMTDGKGTYCTTAQEDNATLEVLARGARAGKVDFSRVALLRTGSDFDRPYDGQSAADGLVNYAQQGGFVPATHNL VNAAKPLLDDIVLRWPQWAQGVPAN
Specific function: Unknown
COG id: COG5042
COG function: function code F; Purine nucleoside permease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37337; Mature: 37206
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHAPTTTPLRTAAKLLAAGAAALTLNSCAYDGIKVIVINMFQGEAQPFIDRYDLKEKVY CCCCCCCCHHHHHHHHHHCCHHHEEECHHCCCCEEEEEEEECCCCCCCCHHHHCCCCEEE IAGLSPDAPNLLCNYDGICQVTTGMGYANAAATLSALLYRSKLDLTQTYFVIAGIAGIDP EEECCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHEEEEEEECCCCC GQGTVGSAAWARYAVDYGLSHEIDAREMPAAWPYGYFGIGTKGPGEKPPMNYRTEVFRLN CCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHH EALLQRAYALSKPVTLEDSPEAIAFRKHYAYAPANQPPAVIQCDVASADTWWAGRNLGQR HHHHHHHHHHCCCCEECCCCCCEEEHHHEEECCCCCCCCEEEEECCCCCCCHHCCCHHHH ARDWTKTMTDGKGTYCTTAQEDNATLEVLARGARAGKVDFSRVALLRTGSDFDRPYDGQS HHHHHHHHCCCCCCEEECCCCCCCHHHHHHCCCCCCCCCHHHEEEEECCCCCCCCCCCCH AADGLVNYAQQGGFVPATHNLVNAAKPLLDDIVLRWPQWAQGVPAN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC >Mature Secondary Structure THAPTTTPLRTAAKLLAAGAAALTLNSCAYDGIKVIVINMFQGEAQPFIDRYDLKEKVY CCCCCCCHHHHHHHHHHCCHHHEEECHHCCCCEEEEEEEECCCCCCCCHHHHCCCCEEE IAGLSPDAPNLLCNYDGICQVTTGMGYANAAATLSALLYRSKLDLTQTYFVIAGIAGIDP EEECCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHEEEEEEECCCCC GQGTVGSAAWARYAVDYGLSHEIDAREMPAAWPYGYFGIGTKGPGEKPPMNYRTEVFRLN CCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHH EALLQRAYALSKPVTLEDSPEAIAFRKHYAYAPANQPPAVIQCDVASADTWWAGRNLGQR HHHHHHHHHHCCCCEECCCCCCEEEHHHEEECCCCCCCCEEEEECCCCCCCHHCCCHHHH ARDWTKTMTDGKGTYCTTAQEDNATLEVLARGARAGKVDFSRVALLRTGSDFDRPYDGQS HHHHHHHHCCCCCCEEECCCCCCCHHHHHHCCCCCCCCCHHHEEEEECCCCCCCCCCCCH AADGLVNYAQQGGFVPATHNLVNAAKPLLDDIVLRWPQWAQGVPAN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA