Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is fatA [H]

Identifier: 17545519

GI number: 17545519

Start: 846627

End: 848744

Strand: Direct

Name: fatA [H]

Synonym: RSc0800

Alternate gene names: 17545519

Gene position: 846627-848744 (Clockwise)

Preceding gene: 17545518

Following gene: 17545520

Centisome position: 22.78

GC content: 69.97

Gene sequence:

>2118_bases
TTGCTCGCGATGACCAGCCGTCTCGCGGCACGCGCGCTGTCGTGCGCGCTCGCCGCCATTCCTCTTGCCGTGTCGACCCT
GGCGCGCGCCGATGCCGCCTCCGGCACGGATGCCGCCGCCACCGTCGATCTCGACGCAACCACCGTCACCGCGCGCAGCC
AGCGCGGGTTCGCCGCCAGCACGGCCGAGGTCGGCTCGTTCCGCGGGCAGTCGCTGCGCGACATCCCGGCCACCGTCAAC
GTCGTCACGCGCGAGGCGCTCGACGCGCAGCAGGACCGCACGCTGTACGACGCGCTGCGCAACACCGCGGGCGTGACGCG
ACAGCAGCTCTCGGGCGAGACTTTCGACAACCTCGCCATCCGCGGCGTGACGCTGGAGAACCGCACCAACTTCCGCCTCA
ACGGCTCGATGCCGGTCTTCAACCTGATGGCGATCCCGCTGGAGGACAAGGAGCGCGTGGAGGTGCTCAAGGGCGTGTCG
GCGCTCTACTACGGCTACACCACGCCGGGCGGCATGGTGAACCTCGTCACCAAGCGCGCGGGCAACACGCCGGTCACCTC
GGTCGGCATGTCGGTCGACAGCAACGGCACCGCCATCGCCAACGTCGACGTGGCCCGCCGCTTCGGCGAAGACAACCAGT
ACGGCCTGCGCTTCAATGCCGCGGGCGGCCGGCTGGGATCGGCCACCAGCGGCATCGACGGCGATCGCCAGATGGCGAGC
CTGGCCTTCGACTGGAAGGTCAACAGCCGCCTGAGCCTGAAGGCCGATGTGGAGTACGCGCGCCAGGTCATCACCGAGCA
GTCGGTGGTGACGCTGCCGGCCGCGAAGAACGGCGTCATCTCGCTGCCCGCCATGCCGGACCCGACCAAGCGCCTGTCGC
CGGACTGGGCCAAGTTCCGCGCCAACAGCACCACCGCGATGCTGCGCGCCGATTACGCGCTCAACGACGACTGGCTGGTG
ACGGTCGAGGGCGGCACCTCGGAGCTGGCGCGCACGCGGGCCTTCACGGAAATCGGCAGCGTCAACGCGGTGACCGGCAA
GGGCACGATCTCGGGCAACCGCCAGGACGGCCGCTGGACCACCGGCCACCTGCGCGCCGACCTCAACGGCACCCAGATGA
CCGGCTCGGTCAAGCACGAGCTGACCTTCGGCGTGGCGCGCTCGGAGATGCGCCAGGCCGCGGTGTATTCCAGCCGCTTC
TCCGGCACGCAGAACCTGTACAACCCGGTCGACCTCGGCTGGCTGCCGACCACCGGCACCAGCGTCACCGCCGCGCAGCG
CGCCGTCGACACCGGCGTCTACGCGCTGGACCGCATGACCCTGACGCAGCACTGGCAGGTCATCGCCGGCCTGCGCTACA
CCAGCTACACCAGCGTGCAGGCGCCCAACCGCTACGAGGCCAGCAAGACCACGCCGCTCGGCGCGCTGATCTACAAGTTC
ACCCCGACCCTGTCGGCCTATGCCTCGTACGCGCAGGGCCTGGAGGCGGGCGACCGCGCGCCCAACACCGCCGCCAACGC
CAACGTGGCGATGCCGCCCGCGGTCAGCAAGCAGAAGGAAGTGGGCGTGCGCTATGAAACGCCGGCCGGCACCCAGCTGT
CGGCGGCGCTGTATGAGATCGACCGGGCCGCCAGCTATACCAACGCTTCCAACGTCTACGTGCAGGACGGCCGCCAGCGC
ATCCGCGGCCTGGAACTGAATGCGCAGGGACGCGTCACGAACGACCTGTCGCTGCTGGCCTCGGCCGGCTGGATCGACGC
CAAGTTCCGCGGCGTCGGCAACGGCCTCGACGGCAAGACGCCGGAGAACACGCCGCGCGCCACCGCCAGCCTGTTCGCCG
AATACACCCTGCCGATGCTGCGCTCGGTGTCGTTCAACGCCGGCGCCTATTACGTCGGCCCGCGCCCGGTCAACGACGCC
GACCAGGCGTGGCTGGGCGGCACCACGCTGTTCGGCGCCGGCGCGCGCTATGTCACGCGCGTCGCCGGCAAGCGCACCAC
CTGGCAGCTCAACGTCGACAACCTGACCGACAAGCGCTACTGGGCGGGTGCCGGCAACAACCGGCTGTCGATGGGCGCGC
CGCGCGTGTTCAAGCTGTCGATGAAGATCGATCTCTGA

Upstream 100 bases:

>100_bases
GCCAGTTGACCGACGCGCTGCATGCCGACCGCATCGGCGCGTTTTCCATTCCCCAGCATCGTTCTGGGCGCGTCCGGTTT
TCGCCAATCCTGATGGACCC

Downstream 100 bases:

>100_bases
TGCCGTTCACTTCCGGAGCCAAACCGATGAAACCGTTCCTTCGCCTGTGCGCGGTCGCGCTGATGGCATGCGCCTGCCTG
CGGCCCGCCGCCGCCGCCGA

Product: ferrisiderophore receptor signal peptide protein

Products: NA

Alternate protein names: OM2 [H]

Number of amino acids: Translated: 705; Mature: 705

Protein sequence:

>705_residues
MLAMTSRLAARALSCALAAIPLAVSTLARADAASGTDAAATVDLDATTVTARSQRGFAASTAEVGSFRGQSLRDIPATVN
VVTREALDAQQDRTLYDALRNTAGVTRQQLSGETFDNLAIRGVTLENRTNFRLNGSMPVFNLMAIPLEDKERVEVLKGVS
ALYYGYTTPGGMVNLVTKRAGNTPVTSVGMSVDSNGTAIANVDVARRFGEDNQYGLRFNAAGGRLGSATSGIDGDRQMAS
LAFDWKVNSRLSLKADVEYARQVITEQSVVTLPAAKNGVISLPAMPDPTKRLSPDWAKFRANSTTAMLRADYALNDDWLV
TVEGGTSELARTRAFTEIGSVNAVTGKGTISGNRQDGRWTTGHLRADLNGTQMTGSVKHELTFGVARSEMRQAAVYSSRF
SGTQNLYNPVDLGWLPTTGTSVTAAQRAVDTGVYALDRMTLTQHWQVIAGLRYTSYTSVQAPNRYEASKTTPLGALIYKF
TPTLSAYASYAQGLEAGDRAPNTAANANVAMPPAVSKQKEVGVRYETPAGTQLSAALYEIDRAASYTNASNVYVQDGRQR
IRGLELNAQGRVTNDLSLLASAGWIDAKFRGVGNGLDGKTPENTPRATASLFAEYTLPMLRSVSFNAGAYYVGPRPVNDA
DQAWLGGTTLFGAGARYVTRVAGKRTTWQLNVDNLTDKRYWAGAGNNRLSMGAPRVFKLSMKIDL

Sequences:

>Translated_705_residues
MLAMTSRLAARALSCALAAIPLAVSTLARADAASGTDAAATVDLDATTVTARSQRGFAASTAEVGSFRGQSLRDIPATVN
VVTREALDAQQDRTLYDALRNTAGVTRQQLSGETFDNLAIRGVTLENRTNFRLNGSMPVFNLMAIPLEDKERVEVLKGVS
ALYYGYTTPGGMVNLVTKRAGNTPVTSVGMSVDSNGTAIANVDVARRFGEDNQYGLRFNAAGGRLGSATSGIDGDRQMAS
LAFDWKVNSRLSLKADVEYARQVITEQSVVTLPAAKNGVISLPAMPDPTKRLSPDWAKFRANSTTAMLRADYALNDDWLV
TVEGGTSELARTRAFTEIGSVNAVTGKGTISGNRQDGRWTTGHLRADLNGTQMTGSVKHELTFGVARSEMRQAAVYSSRF
SGTQNLYNPVDLGWLPTTGTSVTAAQRAVDTGVYALDRMTLTQHWQVIAGLRYTSYTSVQAPNRYEASKTTPLGALIYKF
TPTLSAYASYAQGLEAGDRAPNTAANANVAMPPAVSKQKEVGVRYETPAGTQLSAALYEIDRAASYTNASNVYVQDGRQR
IRGLELNAQGRVTNDLSLLASAGWIDAKFRGVGNGLDGKTPENTPRATASLFAEYTLPMLRSVSFNAGAYYVGPRPVNDA
DQAWLGGTTLFGAGARYVTRVAGKRTTWQLNVDNLTDKRYWAGAGNNRLSMGAPRVFKLSMKIDL
>Mature_705_residues
MLAMTSRLAARALSCALAAIPLAVSTLARADAASGTDAAATVDLDATTVTARSQRGFAASTAEVGSFRGQSLRDIPATVN
VVTREALDAQQDRTLYDALRNTAGVTRQQLSGETFDNLAIRGVTLENRTNFRLNGSMPVFNLMAIPLEDKERVEVLKGVS
ALYYGYTTPGGMVNLVTKRAGNTPVTSVGMSVDSNGTAIANVDVARRFGEDNQYGLRFNAAGGRLGSATSGIDGDRQMAS
LAFDWKVNSRLSLKADVEYARQVITEQSVVTLPAAKNGVISLPAMPDPTKRLSPDWAKFRANSTTAMLRADYALNDDWLV
TVEGGTSELARTRAFTEIGSVNAVTGKGTISGNRQDGRWTTGHLRADLNGTQMTGSVKHELTFGVARSEMRQAAVYSSRF
SGTQNLYNPVDLGWLPTTGTSVTAAQRAVDTGVYALDRMTLTQHWQVIAGLRYTSYTSVQAPNRYEASKTTPLGALIYKF
TPTLSAYASYAQGLEAGDRAPNTAANANVAMPPAVSKQKEVGVRYETPAGTQLSAALYEIDRAASYTNASNVYVQDGRQR
IRGLELNAQGRVTNDLSLLASAGWIDAKFRGVGNGLDGKTPENTPRATASLFAEYTLPMLRSVSFNAGAYYVGPRPVNDA
DQAWLGGTTLFGAGARYVTRVAGKRTTWQLNVDNLTDKRYWAGAGNNRLSMGAPRVFKLSMKIDL

Specific function: Anguibactin receptor, essential component of the iron uptake system of V.anguillarum [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=746, Percent_Identity=23.7265415549598, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1787344, Length=745, Percent_Identity=22.6845637583893, Blast_Score=95, Evalue=2e-20,
Organism=Escherichia coli, GI1787024, Length=774, Percent_Identity=22.9974160206718, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788478, Length=642, Percent_Identity=22.1183800623053, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010917
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 75550; Mature: 75550

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAMTSRLAARALSCALAAIPLAVSTLARADAASGTDAAATVDLDATTVTARSQRGFAAS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCCCCC
TAEVGSFRGQSLRDIPATVNVVTREALDAQQDRTLYDALRNTAGVTRQQLSGETFDNLAI
HHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEE
RGVTLENRTNFRLNGSMPVFNLMAIPLEDKERVEVLKGVSALYYGYTTPGGMVNLVTKRA
EEEEECCCCCEEECCCCCEEEEEEECCCCHHHHHHHHCCHHEEEEECCCCCEEEEEECCC
GNTPVTSVGMSVDSNGTAIANVDVARRFGEDNQYGLRFNAAGGRLGSATSGIDGDRQMAS
CCCCCEEECEEECCCCCEEEEEHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEE
LAFDWKVNSRLSLKADVEYARQVITEQSVVTLPAAKNGVISLPAMPDPTKRLSPDWAKFR
EEEEEEECCEEEEEECHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCHHHCCCCHHHHC
ANSTTAMLRADYALNDDWLVTVEGGTSELARTRAFTEIGSVNAVTGKGTISGNRQDGRWT
CCCCEEEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCEECCCCCCCCEE
TGHLRADLNGTQMTGSVKHELTFGVARSEMRQAAVYSSRFSGTQNLYNPVDLGWLPTTGT
EEEEEECCCCCEECCCCHHHEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
SVTAAQRAVDTGVYALDRMTLTQHWQVIAGLRYTSYTSVQAPNRYEASKTTPLGALIYKF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCEEEEEEC
TPTLSAYASYAQGLEAGDRAPNTAANANVAMPPAVSKQKEVGVRYETPAGTQLSAALYEI
CCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCHHHCCEEEECCCCCHHHHHHHHH
DRAASYTNASNVYVQDGRQRIRGLELNAQGRVTNDLSLLASAGWIDAKFRGVGNGLDGKT
HHHHCCCCCCCEEEECCHHHHCCEEECCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCC
PENTPRATASLFAEYTLPMLRSVSFNAGAYYVGPRPVNDADQAWLGGTTLFGAGARYVTR
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHCCCCEEECCCHHHHHH
VAGKRTTWQLNVDNLTDKRYWAGAGNNRLSMGAPRVFKLSMKIDL
HCCCCEEEEEECCCCCCCCEEECCCCCEEECCCCEEEEEEEEECC
>Mature Secondary Structure
MLAMTSRLAARALSCALAAIPLAVSTLARADAASGTDAAATVDLDATTVTARSQRGFAAS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCCCCC
TAEVGSFRGQSLRDIPATVNVVTREALDAQQDRTLYDALRNTAGVTRQQLSGETFDNLAI
HHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEE
RGVTLENRTNFRLNGSMPVFNLMAIPLEDKERVEVLKGVSALYYGYTTPGGMVNLVTKRA
EEEEECCCCCEEECCCCCEEEEEEECCCCHHHHHHHHCCHHEEEEECCCCCEEEEEECCC
GNTPVTSVGMSVDSNGTAIANVDVARRFGEDNQYGLRFNAAGGRLGSATSGIDGDRQMAS
CCCCCEEECEEECCCCCEEEEEHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEE
LAFDWKVNSRLSLKADVEYARQVITEQSVVTLPAAKNGVISLPAMPDPTKRLSPDWAKFR
EEEEEEECCEEEEEECHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCHHHCCCCHHHHC
ANSTTAMLRADYALNDDWLVTVEGGTSELARTRAFTEIGSVNAVTGKGTISGNRQDGRWT
CCCCEEEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCEECCCCCCCCEE
TGHLRADLNGTQMTGSVKHELTFGVARSEMRQAAVYSSRFSGTQNLYNPVDLGWLPTTGT
EEEEEECCCCCEECCCCHHHEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
SVTAAQRAVDTGVYALDRMTLTQHWQVIAGLRYTSYTSVQAPNRYEASKTTPLGALIYKF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCEEEEEEC
TPTLSAYASYAQGLEAGDRAPNTAANANVAMPPAVSKQKEVGVRYETPAGTQLSAALYEI
CCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCHHHCCEEEECCCCCHHHHHHHHH
DRAASYTNASNVYVQDGRQRIRGLELNAQGRVTNDLSLLASAGWIDAKFRGVGNGLDGKT
HHHHCCCCCCCEEEECCHHHHCCEEECCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCC
PENTPRATASLFAEYTLPMLRSVSFNAGAYYVGPRPVNDADQAWLGGTTLFGAGARYVTR
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHCCCCEEECCCHHHHHH
VAGKRTTWQLNVDNLTDKRYWAGAGNNRLSMGAPRVFKLSMKIDL
HCCCCEEEEEECCCCCCCCEEECCCCCEEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2830268; 13129954; 2311935 [H]