| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545513
Identifier: 17545513
GI number: 17545513
Start: 838723
End: 839208
Strand: Reverse
Name: 17545513
Synonym: RSc0794
Alternate gene names: NA
Gene position: 839208-838723 (Counterclockwise)
Preceding gene: 17545514
Following gene: 17545512
Centisome position: 22.58
GC content: 67.7
Gene sequence:
>486_bases TTGCCCACCGATCCGCTGCGTCCTCCGGTGATCCGCAGTCACCAGGATTTCGCCTCCGGCATCCTGTTCATCATCGCAGG CGCAGCCTTCGCCATCCTGGCGCGCAGTTACCGCATGGGAACCGCCAGCAACATGGGCCCGGGCTATTTCCCGTTCTGGC TCGGCGTGGTGCTGGCGCTGCTGGGCGCGGTGGTGATGGCGCGGTCACTGTCGCGCAAGGGCGTGGCCGACCGCATCCCG CGCTGGGACGTCAAGACGCTGCTGTGGATCCTCGGCTCGGTCGTGCTGTTCGGGCTGCTGCTGCAGCCGCTGGGGCTGGT GCTGTCGCTGGTGGTGCTCGTGCTGGTCTCCAGCATGGCGAGCCATGAATTCACCTGGAAGGGCGCGGCCGGCACGGCCG TCGTGATGGTGCTGATGAGCCTGGCGGCCTTCGTCTACGGGCTCAAGCTGCAGTTCCCGGTGTGGCCGGCCTTCATCGGC GGCTGA
Upstream 100 bases:
>100_bases GCAAGGTGCTTGAAAGTCGGCCGGCTTCGCGTGCACACTTGGGCGCCCATCAGGCCCCGGTCCGCCGGCGGCCTACCGCG CCCGCACGAGGAGACCCGCT
Downstream 100 bases:
>100_bases GGCGCGCGACATGGACCTCCTTGCCAATCTCGCGCTGGGCTTTTCCACCGCGCTGTCGCTCCAGAACCTGGTCTACGCCT TCATCGGCTGCGTGCTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ1 [H]
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MPTDPLRPPVIRSHQDFASGILFIIAGAAFAILARSYRMGTASNMGPGYFPFWLGVVLALLGAVVMARSLSRKGVADRIP RWDVKTLLWILGSVVLFGLLLQPLGLVLSLVVLVLVSSMASHEFTWKGAAGTAVVMVLMSLAAFVYGLKLQFPVWPAFIG G
Sequences:
>Translated_161_residues MPTDPLRPPVIRSHQDFASGILFIIAGAAFAILARSYRMGTASNMGPGYFPFWLGVVLALLGAVVMARSLSRKGVADRIP RWDVKTLLWILGSVVLFGLLLQPLGLVLSLVVLVLVSSMASHEFTWKGAAGTAVVMVLMSLAAFVYGLKLQFPVWPAFIG G >Mature_160_residues PTDPLRPPVIRSHQDFASGILFIIAGAAFAILARSYRMGTASNMGPGYFPFWLGVVLALLGAVVMARSLSRKGVADRIPR WDVKTLLWILGSVVLFGLLLQPLGLVLSLVVLVLVSSMASHEFTWKGAAGTAVVMVLMSLAAFVYGLKLQFPVWPAFIGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009936 [H]
Pfam domain/function: PF07331 DUF1468 [H]
EC number: NA
Molecular weight: Translated: 17285; Mature: 17154
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTDPLRPPVIRSHQDFASGILFIIAGAAFAILARSYRMGTASNMGPGYFPFWLGVVLAL CCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LGAVVMARSLSRKGVADRIPRWDVKTLLWILGSVVLFGLLLQPLGLVLSLVVLVLVSSMA HHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHEFTWKGAAGTAVVMVLMSLAAFVYGLKLQFPVWPAFIGG HCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC >Mature Secondary Structure PTDPLRPPVIRSHQDFASGILFIIAGAAFAILARSYRMGTASNMGPGYFPFWLGVVLAL CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LGAVVMARSLSRKGVADRIPRWDVKTLLWILGSVVLFGLLLQPLGLVLSLVVLVLVSSMA HHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHEFTWKGAAGTAVVMVLMSLAAFVYGLKLQFPVWPAFIGG HCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]