| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is tolA
Identifier: 17545453
GI number: 17545453
Start: 780588
End: 781625
Strand: Direct
Name: tolA
Synonym: RSc0734
Alternate gene names: NA
Gene position: 780588-781625 (Clockwise)
Preceding gene: 17545452
Following gene: 17545454
Centisome position: 21.0
GC content: 70.23
Gene sequence:
>1038_bases ATGGCTACGACGTCGCTGCATCGTTACGAGCCGGTCCGCGAGCGCGGGACGCTGCGAGCGTTCGCGCTGGCGGTGCTGAC GCACTTGCTGTTGCTGACCTTCCTGTATTTCGGCGTGCAGTGGCAGAGCAGCACGCCGCGCGGGGAAGAGGCCGAGTTGT GGGACGAGGCGGCGCTGCAGCAGGCAGTGCAGTCTGCGCCGGCGCCCGAGCCGAAGCCGGAACCGGCCGTCCAGGCGCCG CCGGCCAAGGTGGAGGAAGAAGCGGACATTGCGCTGGAGCAGCAAAAGCGCAAGCGCGAGGAGGAAGCCGCTGCCGCACG CGAGGCCGAACTGGCGCGCCGCGCGACGGCGGAGCGCGAGGACGCCAAGCGCCAGGCCCTGCTCAAAGAGCAGAAGGCGC AGCAGGCCCGGCAAGCGGAACTCCAGAAGCGGGCCCTGGCCGAACAGCTGGCACAGCAGGCCAAGGAGCGGCAGGCCCAC GAGAAAGCGGTCGCTGCCGAGGCCCAGGCGCGCAAGGACGCCCAGCTGAAGGCGCAAGCCGAGGCCAAGGCCAAAGCCGA GGCGGAAGCCAGGCAGAAGGCCAAGGCCGTAGCGGAAGCCAAGGCGAAGGCCGACGCAGAGCAACGGGCTGCGCAAGCCA GGTCCAACGCTCAGCGGCAGGCGCGCCTGCGGGATCTGCAAGCGTTGGCGGGCACTGCCGGTGCGACCGGCGCGGCGGCG GGCTCGGGCGGCGGCGTCGGCAGCGGGACGGGTGCGGGCGGCACCGCGTCGGCGGGGTATGCCGACCGCGTGCGCGCCAA GGTGCAGCCGAACATCAATTTCTATGACGACACCTCCGGCAACCCCATCGTGACGGTGCTGGTCCAGATGGCGCCCGATG GTACGGTGTTGTCGCGCAGGGTCACCAAACCGAGTGGATATCCGGTGCTGGACGAAGCCGTGCTGCGCGCGATCGACCTG TCCAGTCCGCTGCCCCGCGATACGAATGGCAAGGCGCCTGCGAGTGTGGTCGTCGGCTTCAAGCCCAAGCGGGGCTGA
Upstream 100 bases:
>100_bases GTGATGGGCGTGCTCAAAGGGGACGGCGTCAAGCGCGTCGGTCTGATGGTGAAGTCGCAATGAACGCGTTGACGAGCGCT CGCGGAGCAATCTGACAGGC
Downstream 100 bases:
>100_bases TCGCCCGATACGCGGGTGAGGGATGCGTTCAACAAGTTGTGAGGATGATGATGCGGAATGTTTGGAAGTCTGGACTTCGA CGATCGGCCTGGATCGGGCT
Product: TOLA-like transport transmembrane protein
Products: NA
Alternate protein names: NB-Like; LA-Related Transport Transmembrane Protein; NB Family Protein; NB C-Terminal; Membrane Spanning Protein In lA-TolQ-TolR Complex; LA Protein; NB Protein; Protein la; NB-Like Protein; Na-Related Protein; NB Domain-Containing Protein; TOLA-Like Transport Transmembrane Protein
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MATTSLHRYEPVRERGTLRAFALAVLTHLLLLTFLYFGVQWQSSTPRGEEAELWDEAALQQAVQSAPAPEPKPEPAVQAP PAKVEEEADIALEQQKRKREEEAAAAREAELARRATAEREDAKRQALLKEQKAQQARQAELQKRALAEQLAQQAKERQAH EKAVAAEAQARKDAQLKAQAEAKAKAEAEARQKAKAVAEAKAKADAEQRAAQARSNAQRQARLRDLQALAGTAGATGAAA GSGGGVGSGTGAGGTASAGYADRVRAKVQPNINFYDDTSGNPIVTVLVQMAPDGTVLSRRVTKPSGYPVLDEAVLRAIDL SSPLPRDTNGKAPASVVVGFKPKRG
Sequences:
>Translated_345_residues MATTSLHRYEPVRERGTLRAFALAVLTHLLLLTFLYFGVQWQSSTPRGEEAELWDEAALQQAVQSAPAPEPKPEPAVQAP PAKVEEEADIALEQQKRKREEEAAAAREAELARRATAEREDAKRQALLKEQKAQQARQAELQKRALAEQLAQQAKERQAH EKAVAAEAQARKDAQLKAQAEAKAKAEAEARQKAKAVAEAKAKADAEQRAAQARSNAQRQARLRDLQALAGTAGATGAAA GSGGGVGSGTGAGGTASAGYADRVRAKVQPNINFYDDTSGNPIVTVLVQMAPDGTVLSRRVTKPSGYPVLDEAVLRAIDL SSPLPRDTNGKAPASVVVGFKPKRG >Mature_344_residues ATTSLHRYEPVRERGTLRAFALAVLTHLLLLTFLYFGVQWQSSTPRGEEAELWDEAALQQAVQSAPAPEPKPEPAVQAPP AKVEEEADIALEQQKRKREEEAAAAREAELARRATAEREDAKRQALLKEQKAQQARQAELQKRALAEQLAQQAKERQAHE KAVAAEAQARKDAQLKAQAEAKAKAEAEARQKAKAVAEAKAKADAEQRAAQARSNAQRQARLRDLQALAGTAGATGAAAG SGGGVGSGTGAGGTASAGYADRVRAKVQPNINFYDDTSGNPIVTVLVQMAPDGTVLSRRVTKPSGYPVLDEAVLRAIDLS SPLPRDTNGKAPASVVVGFKPKRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36753; Mature: 36621
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTSLHRYEPVRERGTLRAFALAVLTHLLLLTFLYFGVQWQSSTPRGEEAELWDEAALQ CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH QAVQSAPAPEPKPEPAVQAPPAKVEEEADIALEQQKRKREEEAAAAREAELARRATAERE HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAKRQALLKEQKAQQARQAELQKRALAEQLAQQAKERQAHEKAVAAEAQARKDAQLKAQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAKAKAEAEARQKAKAVAEAKAKADAEQRAAQARSNAQRQARLRDLQALAGTAGATGAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GSGGGVGSGTGAGGTASAGYADRVRAKVQPNINFYDDTSGNPIVTVLVQMAPDGTVLSRR CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHH VTKPSGYPVLDEAVLRAIDLSSPLPRDTNGKAPASVVVGFKPKRG CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure ATTSLHRYEPVRERGTLRAFALAVLTHLLLLTFLYFGVQWQSSTPRGEEAELWDEAALQ CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH QAVQSAPAPEPKPEPAVQAPPAKVEEEADIALEQQKRKREEEAAAAREAELARRATAERE HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAKRQALLKEQKAQQARQAELQKRALAEQLAQQAKERQAHEKAVAAEAQARKDAQLKAQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAKAKAEAEARQKAKAVAEAKAKADAEQRAAQARSNAQRQARLRDLQALAGTAGATGAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GSGGGVGSGTGAGGTASAGYADRVRAKVQPNINFYDDTSGNPIVTVLVQMAPDGTVLSRR CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHH VTKPSGYPVLDEAVLRAIDLSSPLPRDTNGKAPASVVVGFKPKRG CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA