| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is mltC [C]
Identifier: 17545428
GI number: 17545428
Start: 757141
End: 758229
Strand: Direct
Name: mltC [C]
Synonym: RSc0709
Alternate gene names: 17545428
Gene position: 757141-758229 (Clockwise)
Preceding gene: 17545421
Following gene: 17545449
Centisome position: 20.37
GC content: 69.42
Gene sequence:
>1089_bases ATGGAGTTGAACGCAGGGGGCGCGGTTGCGCCCCGTCATGAGTGGCATCCTGGCATCCAGCTGTTGTTCCGCGGCGGGCA CGTCGCGCTCAACAGCATCGGCGTGGTGGCGGTGGCGGCCGCGGTCGCACTGTCGCTCAACAGCGAGTGGCGAGCGATGG TCGCGCAGCGCGTTCTGCATTTCACGCCCGGCATGGAGGTCAGCCTGGCCGCCAATACGCCATCGCCGGCCGTCGCGGCC AACGTGGAGCGGGTCGCCTTTGCGCCCGCCGCGGCATCGTCCGCCGATACTGGTGCGGCGCAGGCCGCCGCGCCCGCAGC CGAGGTGGCGCAGGCCGGTCCGGCTGCGGCTGCCGGCTGGGACACGTTGTCGCACGTGCCATCCGTGGCCGATCTCGCGG CGCAGATCCCGAACACGCAGGTCGTACGCGACGCGCGGGATTCGGCGACCGCCGGTACGCCGCGCGAGCAGGCTGCCGTG GCGGAATACATTGCCCGCAAGTACCGTGTGGCGGCCACCGCCACCGGTCAGCTGGTGAAGGCGGCCTATCAGACCGGCAA GGAAGTCGGCCTGGATCCGCTGCTGATCCTCGGCGTGATGGCCATCGAGTCCAGCTTCAATCCGTTCGCGGAAAGCGGCA TGGGCGCGCAGGGCCTGATGCAGGTGATGACCAAGGTCCACCAGGACAAATACGAAGTGATGGGCGGCGTCGGTGCCGCG CTCAACCCGTATGCCAACATCAAGGTCGGTGCGCTGGTGCTCAAGGATTGCATCGCCCGCGCCGGCTCGATCGAGGGTGG CCTCAAGCTGTATGTCGGCGCCGTCACGCAAGGTGACGGCGGCTACGGCGGCAAGGTGCTGCAGGAGCGTTCGCGTCTGC GTCTGGTGGCCACCGGCCGCAAGTCGCCGGTGACGATGGCGTCCGAGCGCGAGTCCGCCAAGCCGGCCGCGGTGGCGACG CCGGTGGCACCGGCATCGCAGACGCAGGCTGCCAAGCCTGTCGCGAAGCAGCCCATGGCCGGCCAGCAGGAAGAAGCCAG CCTGGTCGACGACAAGGCGCACAGTCCGGAACGTCAGGGCCAGGCTTGA
Upstream 100 bases:
>100_bases TTCTTCCGGGATCGGACTGGCGCTGCAACGCCGGCTCGTTGCCCCGGTAGGCCGCCGCCTAGCGCGTGCCGGTCAGTATG CGCTGCCGCGTAGGCTGCGC
Downstream 100 bases:
>100_bases TTCCGAGCCCCGGCGCCATGGAAAAAGAAAGGCCGTCGCTACGACGGCCTTTTTCTTTGGGAGAAAGGGCGAGGGCGGAG GCTCAGCGGCGGAACAGCCT
Product: hypothetical protein
Products: N-Acetylmuramic Acid Residues; N-Acetylglucosamine Residues [C]
Alternate protein names: Transglycosylase; Transglycosylase SLT Family Protein; Transglycosylase SLT Family; Lytic Transglycosylase; Transglycosylase SLT Domain-Containing Lipoprotein; Transmembrane Protein; Transglycosylase Protein; Transglycosylase SLT Domain-Containing; Transmembrane Transglycosylase SLT Family Protein; Transglycosylase Transmembrane Protein
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MELNAGGAVAPRHEWHPGIQLLFRGGHVALNSIGVVAVAAAVALSLNSEWRAMVAQRVLHFTPGMEVSLAANTPSPAVAA NVERVAFAPAAASSADTGAAQAAAPAAEVAQAGPAAAAGWDTLSHVPSVADLAAQIPNTQVVRDARDSATAGTPREQAAV AEYIARKYRVAATATGQLVKAAYQTGKEVGLDPLLILGVMAIESSFNPFAESGMGAQGLMQVMTKVHQDKYEVMGGVGAA LNPYANIKVGALVLKDCIARAGSIEGGLKLYVGAVTQGDGGYGGKVLQERSRLRLVATGRKSPVTMASERESAKPAAVAT PVAPASQTQAAKPVAKQPMAGQQEEASLVDDKAHSPERQGQA
Sequences:
>Translated_362_residues MELNAGGAVAPRHEWHPGIQLLFRGGHVALNSIGVVAVAAAVALSLNSEWRAMVAQRVLHFTPGMEVSLAANTPSPAVAA NVERVAFAPAAASSADTGAAQAAAPAAEVAQAGPAAAAGWDTLSHVPSVADLAAQIPNTQVVRDARDSATAGTPREQAAV AEYIARKYRVAATATGQLVKAAYQTGKEVGLDPLLILGVMAIESSFNPFAESGMGAQGLMQVMTKVHQDKYEVMGGVGAA LNPYANIKVGALVLKDCIARAGSIEGGLKLYVGAVTQGDGGYGGKVLQERSRLRLVATGRKSPVTMASERESAKPAAVAT PVAPASQTQAAKPVAKQPMAGQQEEASLVDDKAHSPERQGQA >Mature_362_residues MELNAGGAVAPRHEWHPGIQLLFRGGHVALNSIGVVAVAAAVALSLNSEWRAMVAQRVLHFTPGMEVSLAANTPSPAVAA NVERVAFAPAAASSADTGAAQAAAPAAEVAQAGPAAAAGWDTLSHVPSVADLAAQIPNTQVVRDARDSATAGTPREQAAV AEYIARKYRVAATATGQLVKAAYQTGKEVGLDPLLILGVMAIESSFNPFAESGMGAQGLMQVMTKVHQDKYEVMGGVGAA LNPYANIKVGALVLKDCIARAGSIEGGLKLYVGAVTQGDGGYGGKVLQERSRLRLVATGRKSPVTMASERESAKPAAVAT PVAPASQTQAAKPVAKQPMAGQQEEASLVDDKAHSPERQGQA
Specific function: Murein-Degrading Enzyme. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division (By Similarity). [C]
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Attached To The Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 36988; Mature: 36988
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELNAGGAVAPRHEWHPGIQLLFRGGHVALNSIGVVAVAAAVALSLNSEWRAMVAQRVLH CCCCCCCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH FTPGMEVSLAANTPSPAVAANVERVAFAPAAASSADTGAAQAAAPAAEVAQAGPAAAAGW CCCCCEEEEECCCCCCHHHHCCHHHEECCCCCCCCCCCCHHHHCCHHHHHHCCCCCCCCH DTLSHVPSVADLAAQIPNTQVVRDARDSATAGTPREQAAVAEYIARKYRVAATATGQLVK HHHHHCCHHHHHHHHCCCHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AAYQTGKEVGLDPLLILGVMAIESSFNPFAESGMGAQGLMQVMTKVHQDKYEVMGGVGAA HHHHCCHHCCCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC LNPYANIKVGALVLKDCIARAGSIEGGLKLYVGAVTQGDGGYGGKVLQERSRLRLVATGR CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHEEEEECCC KSPVTMASERESAKPAAVATPVAPASQTQAAKPVAKQPMAGQQEEASLVDDKAHSPERQG CCCCEECCCCCCCCCCEEECCCCCCCHHHHCCCHHHCCCCCCCHHHHHHCCCCCCCHHCC QA CC >Mature Secondary Structure MELNAGGAVAPRHEWHPGIQLLFRGGHVALNSIGVVAVAAAVALSLNSEWRAMVAQRVLH CCCCCCCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH FTPGMEVSLAANTPSPAVAANVERVAFAPAAASSADTGAAQAAAPAAEVAQAGPAAAAGW CCCCCEEEEECCCCCCHHHHCCHHHEECCCCCCCCCCCCHHHHCCHHHHHHCCCCCCCCH DTLSHVPSVADLAAQIPNTQVVRDARDSATAGTPREQAAVAEYIARKYRVAATATGQLVK HHHHHCCHHHHHHHHCCCHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AAYQTGKEVGLDPLLILGVMAIESSFNPFAESGMGAQGLMQVMTKVHQDKYEVMGGVGAA HHHHCCHHCCCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC LNPYANIKVGALVLKDCIARAGSIEGGLKLYVGAVTQGDGGYGGKVLQERSRLRLVATGR CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHEEEEECCC KSPVTMASERESAKPAAVATPVAPASQTQAAKPVAKQPMAGQQEEASLVDDKAHSPERQG CCCCEECCCCCCCCCCEEECCCCCCCHHHHCCCHHHCCCCCCCHHHHHHCCCCCCCHHCC QA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]
General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA