| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545426
Identifier: 17545426
GI number: 17545426
Start: 753812
End: 754792
Strand: Reverse
Name: 17545426
Synonym: RSc0707
Alternate gene names: NA
Gene position: 754792-753812 (Counterclockwise)
Preceding gene: 17545427
Following gene: 17545425
Centisome position: 20.31
GC content: 70.03
Gene sequence:
>981_bases GTGCGCACCGAGACGCCGGGCATACCGCAAAACCACCGGGGAGCCACAATGCTTGCCAAGACGACCGTCCTGATCAAGAC GGATGACGGCCGCGAAGCCTTGTCCGCGCGCAGCCATGCGCTGCAGGTACGCCAGCGCCATCTGCTGATCCTGATCAACG GCGCCCGCACGATCGAGCAACTGCAACAGATGTTGAGCGACTGGCCCGACCTGGACACCCTGCTGGTGGAATTGCAGCGC GCCGGCATGATCGACGTGCTCGGCGGTGCCGGCGAACCGGAGAAGGCCACCGCCGATCCGCTGACTGCGCACACCGGGCC GGACGCGTCATTCGATCCGGTCGCCTATTTCGAGCAGCCGCTGTTCAACGACCTGCCCGAGGCCGAGGCGCCGGCCGCCG ATCCTGCCGATCCTGCCGATCCTGCCGATCCTGCCGATCCTGCCGATCCTGCCGATCCGGCCGATCCTGCCGATCCTGCC GATCCGGCCGATCCGGCCGATCCGGCCGATCCGGCCGATCCGGCCGATCCGGCCGATCCGGCTGACCCGGCTGACCCGGC TGACCCGGCTGACCCGGCTGACACGGAGGTTCCCACGGTCCCGCCGCTGGAGGGCATGACGCTCGGCCTGCAGACCCTGG CCGCGCCGGTCGGCAACATCGAAGCCGCCAACGAGCCGCTGGCCTGCCCGCCCGAGGCCGATCCGACGCCCGCAGCCGAT CGGGCAGCGTCCATCCCTCCCGAGCTTGCCGACGTGCTGCCCAGCGTCATCAAGGTGGAATTGATGCGGCTGGCGATTGC GCATTTCGGCCACGCGGCCGGCACCGTCATGCCGCTGCTGCGGGCCTGCCGGGAAGACACCACGTCGCTGTGCCGGGCGA TTGCCGCCAGCGGCCAAGTCGCCACGCCGAAGGTCGGCGAGCATACCGCCGCCCGCTTCGTCGATGCCGCCATGCTGGCG CTGACACGCCGCCGAAGCTAG
Upstream 100 bases:
>100_bases CGGCGAAGCTGGACCGATCGTTCACCTGCTTGCGTCCGGCGCTCGACCGATCGTAGGATGGCGCCGCACAGACGGGCTGA CTAACGTACTGCATGCACCG
Downstream 100 bases:
>100_bases CGGTGCCCGGCGTGCCCCGCCGCGGTGCAGCCCATCCCTCGGGTGCGCGTGCCGGCGGAAGTTGCTATGCTGCCCGGACC CGCGCCGGCGCGGGCAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MRTETPGIPQNHRGATMLAKTTVLIKTDDGREALSARSHALQVRQRHLLILINGARTIEQLQQMLSDWPDLDTLLVELQR AGMIDVLGGAGEPEKATADPLTAHTGPDASFDPVAYFEQPLFNDLPEAEAPAADPADPADPADPADPADPADPADPADPA DPADPADPADPADPADPADPADPADPADPADPADTEVPTVPPLEGMTLGLQTLAAPVGNIEAANEPLACPPEADPTPAAD RAASIPPELADVLPSVIKVELMRLAIAHFGHAAGTVMPLLRACREDTTSLCRAIAASGQVATPKVGEHTAARFVDAAMLA LTRRRS
Sequences:
>Translated_326_residues MRTETPGIPQNHRGATMLAKTTVLIKTDDGREALSARSHALQVRQRHLLILINGARTIEQLQQMLSDWPDLDTLLVELQR AGMIDVLGGAGEPEKATADPLTAHTGPDASFDPVAYFEQPLFNDLPEAEAPAADPADPADPADPADPADPADPADPADPA DPADPADPADPADPADPADPADPADPADPADPADTEVPTVPPLEGMTLGLQTLAAPVGNIEAANEPLACPPEADPTPAAD RAASIPPELADVLPSVIKVELMRLAIAHFGHAAGTVMPLLRACREDTTSLCRAIAASGQVATPKVGEHTAARFVDAAMLA LTRRRS >Mature_326_residues MRTETPGIPQNHRGATMLAKTTVLIKTDDGREALSARSHALQVRQRHLLILINGARTIEQLQQMLSDWPDLDTLLVELQR AGMIDVLGGAGEPEKATADPLTAHTGPDASFDPVAYFEQPLFNDLPEAEAPAADPADPADPADPADPADPADPADPADPA DPADPADPADPADPADPADPADPADPADPADPADTEVPTVPPLEGMTLGLQTLAAPVGNIEAANEPLACPPEADPTPAAD RAASIPPELADVLPSVIKVELMRLAIAHFGHAAGTVMPLLRACREDTTSLCRAIAASGQVATPKVGEHTAARFVDAAMLA LTRRRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 7 G5 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011098 - InterPro: IPR005877 - InterPro: IPR019948 - InterPro: IPR019931 - InterPro: IPR001899 [H]
Pfam domain/function: PF07501 G5; PF00746 Gram_pos_anchor; PF04650 YSIRK_signal [H]
EC number: NA
Molecular weight: Translated: 33878; Mature: 33878
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTETPGIPQNHRGATMLAKTTVLIKTDDGREALSARSHALQVRQRHLLILINGARTIEQ CCCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCEEEEEECCHHHHHH LQQMLSDWPDLDTLLVELQRAGMIDVLGGAGEPEKATADPLTAHTGPDASFDPVAYFEQP HHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH LFNDLPEAEAPAADPADPADPADPADPADPADPADPADPADPADPADPADPADPADPADP HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADPADPADPADPADTEVPTVPPLEGMTLGLQTLAAPVGNIEAANEPLACPPEADPTPAAD CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH RAASIPPELADVLPSVIKVELMRLAIAHFGHAAGTVMPLLRACREDTTSLCRAIAASGQV HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ATPKVGEHTAARFVDAAMLALTRRRS CCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRTETPGIPQNHRGATMLAKTTVLIKTDDGREALSARSHALQVRQRHLLILINGARTIEQ CCCCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCEEEEEECCHHHHHH LQQMLSDWPDLDTLLVELQRAGMIDVLGGAGEPEKATADPLTAHTGPDASFDPVAYFEQP HHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH LFNDLPEAEAPAADPADPADPADPADPADPADPADPADPADPADPADPADPADPADPADP HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADPADPADPADPADTEVPTVPPLEGMTLGLQTLAAPVGNIEAANEPLACPPEADPTPAAD CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH RAASIPPELADVLPSVIKVELMRLAIAHFGHAAGTVMPLLRACREDTTSLCRAIAASGQV HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ATPKVGEHTAARFVDAAMLALTRRRS CCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12950922 [H]