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The map label for this gene is ubiD [H]

Identifier: 17545427

GI number: 17545427

Start: 754970

End: 756481

Strand: Reverse

Name: ubiD [H]

Synonym: RSc0708

Alternate gene names: 17545427

Gene position: 756481-754970 (Counterclockwise)

Preceding gene: 17545429

Following gene: 17545426

Centisome position: 20.36

GC content: 67.13

Gene sequence:

>1512_bases
ATGCAATACAGGGACTTACGTGATTTTCTCGCCCAGCTGGAACGCATCGGCGAGTTGCGCCGGATACGTGTTCCAGTGTC
GCCGCGGCTGGAAATGACCGAAGTCTGCGACCGCCTGCTGCGCGCGGAAGGCCCGGCCGTCGTATTCGAGCGCCCCGCGG
ACGGCGCGCAGACATACGACATGCCCGTGCTCGCCAACCTGTTCGGCACGCCGCGCCGCGTGGCGCTGGGCATGGGGGCG
GAGTCGCTCGACGAGCTGCGCGACGTGGGCCGCCTGCTCTCGGCGCTCAAGGAGCCCGAACCGCCACGCGGCCTGCGCGA
GGCCGGCAAGCTGTGGACGATGGCCAAGGCCGTGTGGGACATGGCGCCGCGCAAGGTGTCGTCGCCGGCGTGCCAGGAGA
TCGTGCTGGAGGGGGATGATGTCGACCTGTCGCGCATTCCCGTGCAGACCTGCTGGCCGGGCGATGCGGCGCCACTGGTC
ACCTGGGGCCTGGTGGTCACGCGCGGCCCCCACAAGAAACGGCAGAACCTGGGCATCTATCGCCAGCAGGTGATCAACCG
CAACCAGGTCATCATGCGCTGGCTGGCGCACCGCGGCGGCGCGCTGGATTTCCGCGAGCACGCCATCGCGCACCCCGGCC
AGCCCTTCCCCATCGCGGTGGCGCTGGGCGCGGATCCCGCCACCATCCTGGGCGCGGTGACGCCGGTGCCGGACACGCTG
TCCGAATACCAGTTCGCCGGCCTGCTGCGCGGCAGCCGGACCGAACTCGCGCAGTGCCTGACGCCCTCGCTCGCGCAGGC
GCAACTACAGGTGCCGGCGGGGGCCGAGATCGTGCTCGAAGGCCACATTCAGCCCGACCCGGCACATCCGAGCGGCTACC
AGCATGCGCTCGAGGGCCCCTTCGGCGACCACACCGGCTACTACAACGAGCAGGACTGGTTCCCCGTCTTCACGGTCGAG
CGCATCACCATGCGGCGCGACCCGATCTACCACTCCACCTACACCGGCAAGCCGCCCGACGAGCCCGCCGTGCTGGGCGT
GGCGCTCAACGAGGTGTTCGTGCCGCTGCTGCAGAAGCAGTTTCCGGAAATCGCCGACTTCTACCTGCCGCCCGAGGGTT
GCAGCTACCGCATGGCGCTGGTCAGCATGAAGAAGCAGTACGCCGGCCATGCCAAGCGCGTGATGTTCGGCGTGTGGAGC
TTCCTGCGGCAGTTCATGTATACGAAGTTCATCGTGGTGGTGGACGACGACGTGGACCTGCGCGACTGGAAGGAAGTCAT
CTGGGCCATCACCACCCGTGTCGATCCGGCGCGTGACACGGTGATGGTCGAGAACACGCCGATCGACTACCTGGACTTCG
CCTCGCCGGTATCGGGCCTCGGCTCGAAAATGGGCATCGATGCCACCAACAAATGGCCCGGCGAGACCACCCGCGAATGG
GGCCAGCCGATCGTGATGGATGCTGCCGTCAAATCCAGGGTGGATGCCATGTGGGAAACCCTCTTTCAATAA

Upstream 100 bases:

>100_bases
CCCGGCCTACGCCAAAAAATTCGCGTACGGACGCCTGTTTGCGGGATCGCGAACGGGCGCGACATCGTCCGTCCTCCTTA
CCTCTCGTTACAAAACTTCC

Downstream 100 bases:

>100_bases
TGGCGCGACCTGGCGCGCCGACCTGCGGGCAAACAGCCAGCCGGATCGCGAACGGGATGGCGCCGGCGCCCAAGGCCCGG
CGAAGCTGGACCGATCGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MQYRDLRDFLAQLERIGELRRIRVPVSPRLEMTEVCDRLLRAEGPAVVFERPADGAQTYDMPVLANLFGTPRRVALGMGA
ESLDELRDVGRLLSALKEPEPPRGLREAGKLWTMAKAVWDMAPRKVSSPACQEIVLEGDDVDLSRIPVQTCWPGDAAPLV
TWGLVVTRGPHKKRQNLGIYRQQVINRNQVIMRWLAHRGGALDFREHAIAHPGQPFPIAVALGADPATILGAVTPVPDTL
SEYQFAGLLRGSRTELAQCLTPSLAQAQLQVPAGAEIVLEGHIQPDPAHPSGYQHALEGPFGDHTGYYNEQDWFPVFTVE
RITMRRDPIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFPEIADFYLPPEGCSYRMALVSMKKQYAGHAKRVMFGVWS
FLRQFMYTKFIVVVDDDVDLRDWKEVIWAITTRVDPARDTVMVENTPIDYLDFASPVSGLGSKMGIDATNKWPGETTREW
GQPIVMDAAVKSRVDAMWETLFQ

Sequences:

>Translated_503_residues
MQYRDLRDFLAQLERIGELRRIRVPVSPRLEMTEVCDRLLRAEGPAVVFERPADGAQTYDMPVLANLFGTPRRVALGMGA
ESLDELRDVGRLLSALKEPEPPRGLREAGKLWTMAKAVWDMAPRKVSSPACQEIVLEGDDVDLSRIPVQTCWPGDAAPLV
TWGLVVTRGPHKKRQNLGIYRQQVINRNQVIMRWLAHRGGALDFREHAIAHPGQPFPIAVALGADPATILGAVTPVPDTL
SEYQFAGLLRGSRTELAQCLTPSLAQAQLQVPAGAEIVLEGHIQPDPAHPSGYQHALEGPFGDHTGYYNEQDWFPVFTVE
RITMRRDPIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFPEIADFYLPPEGCSYRMALVSMKKQYAGHAKRVMFGVWS
FLRQFMYTKFIVVVDDDVDLRDWKEVIWAITTRVDPARDTVMVENTPIDYLDFASPVSGLGSKMGIDATNKWPGETTREW
GQPIVMDAAVKSRVDAMWETLFQ
>Mature_503_residues
MQYRDLRDFLAQLERIGELRRIRVPVSPRLEMTEVCDRLLRAEGPAVVFERPADGAQTYDMPVLANLFGTPRRVALGMGA
ESLDELRDVGRLLSALKEPEPPRGLREAGKLWTMAKAVWDMAPRKVSSPACQEIVLEGDDVDLSRIPVQTCWPGDAAPLV
TWGLVVTRGPHKKRQNLGIYRQQVINRNQVIMRWLAHRGGALDFREHAIAHPGQPFPIAVALGADPATILGAVTPVPDTL
SEYQFAGLLRGSRTELAQCLTPSLAQAQLQVPAGAEIVLEGHIQPDPAHPSGYQHALEGPFGDHTGYYNEQDWFPVFTVE
RITMRRDPIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFPEIADFYLPPEGCSYRMALVSMKKQYAGHAKRVMFGVWS
FLRQFMYTKFIVVVDDDVDLRDWKEVIWAITTRVDPARDTVMVENTPIDYLDFASPVSGLGSKMGIDATNKWPGETTREW
GQPIVMDAAVKSRVDAMWETLFQ

Specific function: Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol [H]

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=501, Percent_Identity=68.4630738522954, Blast_Score=721, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6320748, Length=474, Percent_Identity=23.4177215189873, Blast_Score=104, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 56320; Mature: 56320

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYRDLRDFLAQLERIGELRRIRVPVSPRLEMTEVCDRLLRAEGPAVVFERPADGAQTYD
CCCHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCC
MPVLANLFGTPRRVALGMGAESLDELRDVGRLLSALKEPEPPRGLREAGKLWTMAKAVWD
CHHHHHHCCCCHHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
MAPRKVSSPACQEIVLEGDDVDLSRIPVQTCWPGDAAPLVTWGLVVTRGPHKKRQNLGIY
HCCCCCCCHHHHHHEECCCCCCHHHCCCCCCCCCCCCHHHHHHHHEECCCCHHHHHCCHH
RQQVINRNQVIMRWLAHRGGALDFREHAIAHPGQPFPIAVALGADPATILGAVTPVPDTL
HHHHHCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEECCCCHHHHHCCCCCCHHH
SEYQFAGLLRGSRTELAQCLTPSLAQAQLQVPAGAEIVLEGHIQPDPAHPSGYQHALEGP
HHHHHHHHHCCCHHHHHHHHCCHHHHHEEECCCCCEEEEECCCCCCCCCCCCCHHHHCCC
FGDHTGYYNEQDWFPVFTVERITMRRDPIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQ
CCCCCCCCCCCCCCEEEEHHHHHHHCCCCEECCCCCCCCCCCCEEHHHHHHHHHHHHHHH
FPEIADFYLPPEGCSYRMALVSMKKQYAGHAKRVMFGVWSFLRQFMYTKFIVVVDDDVDL
CHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCH
RDWKEVIWAITTRVDPARDTVMVENTPIDYLDFASPVSGLGSKMGIDATNKWPGETTREW
HHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHCHHHHCCCCCCCCCCCCCCCCCHHHH
GQPIVMDAAVKSRVDAMWETLFQ
CCCEEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQYRDLRDFLAQLERIGELRRIRVPVSPRLEMTEVCDRLLRAEGPAVVFERPADGAQTYD
CCCHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCC
MPVLANLFGTPRRVALGMGAESLDELRDVGRLLSALKEPEPPRGLREAGKLWTMAKAVWD
CHHHHHHCCCCHHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
MAPRKVSSPACQEIVLEGDDVDLSRIPVQTCWPGDAAPLVTWGLVVTRGPHKKRQNLGIY
HCCCCCCCHHHHHHEECCCCCCHHHCCCCCCCCCCCCHHHHHHHHEECCCCHHHHHCCHH
RQQVINRNQVIMRWLAHRGGALDFREHAIAHPGQPFPIAVALGADPATILGAVTPVPDTL
HHHHHCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEECCCCHHHHHCCCCCCHHH
SEYQFAGLLRGSRTELAQCLTPSLAQAQLQVPAGAEIVLEGHIQPDPAHPSGYQHALEGP
HHHHHHHHHCCCHHHHHHHHCCHHHHHEEECCCCCEEEEECCCCCCCCCCCCCHHHHCCC
FGDHTGYYNEQDWFPVFTVERITMRRDPIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQ
CCCCCCCCCCCCCCEEEEHHHHHHHCCCCEECCCCCCCCCCCCEEHHHHHHHHHHHHHHH
FPEIADFYLPPEGCSYRMALVSMKKQYAGHAKRVMFGVWSFLRQFMYTKFIVVVDDDVDL
CHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCH
RDWKEVIWAITTRVDPARDTVMVENTPIDYLDFASPVSGLGSKMGIDATNKWPGETTREW
HHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHCHHHHCCCCCCCCCCCCCCCCCHHHH
GQPIVMDAAVKSRVDAMWETLFQ
CCCEEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA