| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is plsC [H]
Identifier: 17545399
GI number: 17545399
Start: 728261
End: 729061
Strand: Direct
Name: plsC [H]
Synonym: RSc0680
Alternate gene names: 17545399
Gene position: 728261-729061 (Clockwise)
Preceding gene: 17545398
Following gene: 17545401
Centisome position: 19.6
GC content: 68.91
Gene sequence:
>801_bases ATGACGGGCATTGATCAGCGCGCCGACGCGGCGCCCGCCGAGGTGGCCGTGCCGGCGCAGCGCAGGCATGTGCTGCGCAA GCTGCGCTTGGCCATCCACCTGATCGAGGGCATTGCGATCTGTGCGCTGCTGTTCTGGTGGGTCGGCCCGGCGCGCAAGC GCGCGCTGATCCAGCGCTGGTCGCGCAGGCTGCTGGCGCTGTTCCGCGTGACGCTGGCCGTGGATGGCGAGGCGGTGGGG CAGGCCGATCTGGCGGGGGCCATGTTGGTGTCCAACCACGTGTCGTGGCTCGACGTCTATGCCATCAATGCCTGGCATTC GCCGCGCTTCGTCGCCAAATCGGAAATCCGCAGCTGGCCGGTGATCGGCTGGCTGTGCGCGCAGACCGGCGTGCTGTTCG TCGAGCGTGCCCGCAAGCGCGACGCGCACCGCATCATGCACGCCATCGCCGATGCGCTGCGTGGCGGCGAGAGCATCTGC GTGTTTCCCGAAGGCACGACGTCCAACGGGATGCAACTGCTGCCTTTCCACGCCAATTTGTTCCAGGCGCCGGTGACGGC CGCCGCGCCGATCCGTCCGGTGGCGCTGCGCTACCGCATCGCCGCGACCGGCGAACTGACGACGATTCCCGCCTATATCG GCGACATGTCGCTGCTGGATTCGGTCAATGCGATCCTGAACGGGCCGCCGCTGGTGGCCGAGGTGTTCGTCGGGTCCGCC GTGTCCCCGGAAATGGATCGCCGTGCGCTGGCCGAGCACAGCCGCCAGGCTGTCGCCACGCTGATGGAGCGGGCCGGGTA G
Upstream 100 bases:
>100_bases GAGCCGCGCAGCCTGCGCAGCCAGGGCAAGAACTCGCCGTATCTCGGCTTTGAGCTGGCCGGCCGCGTGCGGGCCACGCT GGTTGCCGGTCATCTGGCCT
Downstream 100 bases:
>100_bases CCCGCCGGATTCCGCCCTACTTCTTGTGGGCGAGCGGGTCCTGGGCCTGCTCGCAGGCGACCTGGATCACCTCGCGGCCG GCCGGGGCCAGCGTCATGCG
Product: 1-acyl-sn-glycerol-3-phosphate acyltransferase transmembrane protein
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTGIDQRADAAPAEVAVPAQRRHVLRKLRLAIHLIEGIAICALLFWWVGPARKRALIQRWSRRLLALFRVTLAVDGEAVG QADLAGAMLVSNHVSWLDVYAINAWHSPRFVAKSEIRSWPVIGWLCAQTGVLFVERARKRDAHRIMHAIADALRGGESIC VFPEGTTSNGMQLLPFHANLFQAPVTAAAPIRPVALRYRIAATGELTTIPAYIGDMSLLDSVNAILNGPPLVAEVFVGSA VSPEMDRRALAEHSRQAVATLMERAG
Sequences:
>Translated_266_residues MTGIDQRADAAPAEVAVPAQRRHVLRKLRLAIHLIEGIAICALLFWWVGPARKRALIQRWSRRLLALFRVTLAVDGEAVG QADLAGAMLVSNHVSWLDVYAINAWHSPRFVAKSEIRSWPVIGWLCAQTGVLFVERARKRDAHRIMHAIADALRGGESIC VFPEGTTSNGMQLLPFHANLFQAPVTAAAPIRPVALRYRIAATGELTTIPAYIGDMSLLDSVNAILNGPPLVAEVFVGSA VSPEMDRRALAEHSRQAVATLMERAG >Mature_265_residues TGIDQRADAAPAEVAVPAQRRHVLRKLRLAIHLIEGIAICALLFWWVGPARKRALIQRWSRRLLALFRVTLAVDGEAVGQ ADLAGAMLVSNHVSWLDVYAINAWHSPRFVAKSEIRSWPVIGWLCAQTGVLFVERARKRDAHRIMHAIADALRGGESICV FPEGTTSNGMQLLPFHANLFQAPVTAAAPIRPVALRYRIAATGELTTIPAYIGDMSLLDSVNAILNGPPLVAEVFVGSAV SPEMDRRALAEHSRQAVATLMERAG
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 29042; Mature: 28911
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIDQRADAAPAEVAVPAQRRHVLRKLRLAIHLIEGIAICALLFWWVGPARKRALIQRW CCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH SRRLLALFRVTLAVDGEAVGQADLAGAMLVSNHVSWLDVYAINAWHSPRFVAKSEIRSWP HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHCCCC VIGWLCAQTGVLFVERARKRDAHRIMHAIADALRGGESICVFPEGTTSNGMQLLPFHANL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEHHHH FQAPVTAAAPIRPVALRYRIAATGELTTIPAYIGDMSLLDSVNAILNGPPLVAEVFVGSA HHCCCCCCCCCCHHHEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC VSPEMDRRALAEHSRQAVATLMERAG CCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TGIDQRADAAPAEVAVPAQRRHVLRKLRLAIHLIEGIAICALLFWWVGPARKRALIQRW CCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH SRRLLALFRVTLAVDGEAVGQADLAGAMLVSNHVSWLDVYAINAWHSPRFVAKSEIRSWP HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHCCCC VIGWLCAQTGVLFVERARKRDAHRIMHAIADALRGGESICVFPEGTTSNGMQLLPFHANL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEHHHH FQAPVTAAAPIRPVALRYRIAATGELTTIPAYIGDMSLLDSVNAILNGPPLVAEVFVGSA HHCCCCCCCCCCHHHEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC VSPEMDRRALAEHSRQAVATLMERAG CCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8748025 [H]