| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545367
Identifier: 17545367
GI number: 17545367
Start: 695339
End: 696382
Strand: Reverse
Name: 17545367
Synonym: RSc0648
Alternate gene names: NA
Gene position: 696382-695339 (Counterclockwise)
Preceding gene: 17545368
Following gene: 17545358
Centisome position: 18.74
GC content: 66.57
Gene sequence:
>1044_bases ATGACAACCCAAGAAACAAGCAGGACAGGCGCGCGCCGCCAGCGCGGCGCGGTCGGCCTCATCATGCCGGCCATGCTGAT CGCGATCTTTTCGGTCGGCGCGCTGGCGGTGGACGTCGCGCGCCTGATCGTGGTGCGCAATGAACTGCAGAACGCGGCGG ACGCGGCGGCCCTGGCCGGCGCCGCGGGCCTGTATCCGACCAACCCGACGCCCAACTGGAGCAACGGTGTCGCGCAGGGC ACCAGTGCCGTCAAGCTGAACAAATCCAGCAACGTGCAACTGGTGAGCGGCACCGTCCAGGCCGGCTACTGGAACCTGAC CGGCACGCCGGCCGGGCTGCAATCGCAGTCCATCACGCCCGGCGCCAACGACGTGCCCGCCGTGCAGGTCACCATCAACC GCAGCGCGGGCAACAACGGCGGCCCGGTCGCCACCCTGCTGGCGCCGATCTTCGGCGCGCTGTCGGCCAACTCCTCGGCC ACGGCGGTGGCGGTCATCGCCGCGCCCGGCAGCGCGGGGCCGGGCGCGCTGTTCCCGCTTGCCATCAGCAAGTGCCTGTA TGACCTGTACTGGAACTACGCCACCGGACAGCCCAAGATCGACCCGTCCACCGGCAAGCCCTACGTGTTCCAGATCAACA CGAGCTACCCGTCCTCATCCAATTGCACAAGCGGAGAGTGGACCGGGTTCAACGGCCCCACGGATGCATCCACGCTCAAG GGCCTGGTCCAGAACGGCAACACCTCGACGCTCAGCATCGGGAACATGATCAACACCGCGCTGGCCTCGGGGGTCAAGAG CAGCGTCTACATGGCCATCCCCAGCACGCCGCTGAACGTGACGATTCCAGTGGTGAATCCGCTGAATCCGGGGGCCAGCG AGCCGATCTACGCCTTCGCCGGCATCCAGATCACCAAGGTCGTCTGCTGCGGGACCAACTCCACCATCTGGGCCTCCTTT ATCTCGAACTGGAAGGTCTCCAATAGCGGGGGCGGAACCGGCCCCTATTACGGCGCGTACGTGCCGCCTCGATTGGCGCA ATAG
Upstream 100 bases:
>100_bases CGCGCCGTTCACCGGACCGCTGACCATCAACGCCACCACCACGATGCTGTGCGAATGACACGGCCCCGCTCCGGATTCCC GCCACAAGACGAGGTGTGCG
Downstream 100 bases:
>100_bases CGCCGCCGCTTGCGGTTGCGGAGTAGCAGCCGCCACACGGCCGGCAAGGTCCCCCCGACGGGCCGGCCGTGTTTTTTTCC CCTGGCATATCCAGTATCAG
Product: transmembrane protein
Products: NA
Alternate protein names: TadE Family Protein; Conserved Hypothethical Protein
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTTQETSRTGARRQRGAVGLIMPAMLIAIFSVGALAVDVARLIVVRNELQNAADAAALAGAAGLYPTNPTPNWSNGVAQG TSAVKLNKSSNVQLVSGTVQAGYWNLTGTPAGLQSQSITPGANDVPAVQVTINRSAGNNGGPVATLLAPIFGALSANSSA TAVAVIAAPGSAGPGALFPLAISKCLYDLYWNYATGQPKIDPSTGKPYVFQINTSYPSSSNCTSGEWTGFNGPTDASTLK GLVQNGNTSTLSIGNMINTALASGVKSSVYMAIPSTPLNVTIPVVNPLNPGASEPIYAFAGIQITKVVCCGTNSTIWASF ISNWKVSNSGGGTGPYYGAYVPPRLAQ
Sequences:
>Translated_347_residues MTTQETSRTGARRQRGAVGLIMPAMLIAIFSVGALAVDVARLIVVRNELQNAADAAALAGAAGLYPTNPTPNWSNGVAQG TSAVKLNKSSNVQLVSGTVQAGYWNLTGTPAGLQSQSITPGANDVPAVQVTINRSAGNNGGPVATLLAPIFGALSANSSA TAVAVIAAPGSAGPGALFPLAISKCLYDLYWNYATGQPKIDPSTGKPYVFQINTSYPSSSNCTSGEWTGFNGPTDASTLK GLVQNGNTSTLSIGNMINTALASGVKSSVYMAIPSTPLNVTIPVVNPLNPGASEPIYAFAGIQITKVVCCGTNSTIWASF ISNWKVSNSGGGTGPYYGAYVPPRLAQ >Mature_346_residues TTQETSRTGARRQRGAVGLIMPAMLIAIFSVGALAVDVARLIVVRNELQNAADAAALAGAAGLYPTNPTPNWSNGVAQGT SAVKLNKSSNVQLVSGTVQAGYWNLTGTPAGLQSQSITPGANDVPAVQVTINRSAGNNGGPVATLLAPIFGALSANSSAT AVAVIAAPGSAGPGALFPLAISKCLYDLYWNYATGQPKIDPSTGKPYVFQINTSYPSSSNCTSGEWTGFNGPTDASTLKG LVQNGNTSTLSIGNMINTALASGVKSSVYMAIPSTPLNVTIPVVNPLNPGASEPIYAFAGIQITKVVCCGTNSTIWASFI SNWKVSNSGGGTGPYYGAYVPPRLAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35373; Mature: 35242
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQETSRTGARRQRGAVGLIMPAMLIAIFSVGALAVDVARLIVVRNELQNAADAAALAG CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AAGLYPTNPTPNWSNGVAQGTSAVKLNKSSNVQLVSGTVQAGYWNLTGTPAGLQSQSITP CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEECCEEEECCCCCCCCCCCCCC GANDVPAVQVTINRSAGNNGGPVATLLAPIFGALSANSSATAVAVIAAPGSAGPGALFPL CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHH AISKCLYDLYWNYATGQPKIDPSTGKPYVFQINTSYPSSSNCTSGEWTGFNGPTDASTLK HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH GLVQNGNTSTLSIGNMINTALASGVKSSVYMAIPSTPLNVTIPVVNPLNPGASEPIYAFA HHHHCCCCCEEEHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEE GIQITKVVCCGTNSTIWASFISNWKVSNSGGGTGPYYGAYVPPRLAQ CEEEEEEEEECCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure TTQETSRTGARRQRGAVGLIMPAMLIAIFSVGALAVDVARLIVVRNELQNAADAAALAG CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AAGLYPTNPTPNWSNGVAQGTSAVKLNKSSNVQLVSGTVQAGYWNLTGTPAGLQSQSITP CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEECCEEEECCCCCCCCCCCCCC GANDVPAVQVTINRSAGNNGGPVATLLAPIFGALSANSSATAVAVIAAPGSAGPGALFPL CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHH AISKCLYDLYWNYATGQPKIDPSTGKPYVFQINTSYPSSSNCTSGEWTGFNGPTDASTLK HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH GLVQNGNTSTLSIGNMINTALASGVKSSVYMAIPSTPLNVTIPVVNPLNPGASEPIYAFA HHHHCCCCCEEEHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEE GIQITKVVCCGTNSTIWASFISNWKVSNSGGGTGPYYGAYVPPRLAQ CEEEEEEEEECCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA