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The map label for this gene is yqeB [H]

Identifier: 17545347

GI number: 17545347

Start: 676315

End: 677253

Strand: Direct

Name: yqeB [H]

Synonym: RSc0628

Alternate gene names: 17545347

Gene position: 676315-677253 (Clockwise)

Preceding gene: 17545346

Following gene: 17545348

Centisome position: 18.2

GC content: 65.81

Gene sequence:

>939_bases
GTGACGGTGGCACGGACCTGGGGGTCGGCGCCGCGCCCGCCCGGCTCATGGCTAGCCCTGCGCGAAGACGGCTTAGTGCA
AGGCTCGGTGTCCGGCGGCTGCGTTGAAGACGATCTGATCGCCCGCATGCGGGACGGGTGTCTCTGCGGCAGCCTGCCGT
TTGTCTGCAGGTATGGCGTGACCAAGGACGAAGCAACGCGCTTCGGCCTGCCCTGTGGCGGCACGCTGGAACTCGTGGTG
GAGCCCGCGCCGGATGTGGCATTGCTGAAAGCGCTGGCAGAGCGATTGGCCAGGCGAGAGCTGGTTCTGCGTCACGTGGA
TGTGGCTCGCGGAACCACCTCCATCACAAGCGCGCAGCGCGACAGTGCGCTGACCTGGGACGGTACGCGCCTGACCATGG
TGTACGGCCCGCAATGGCGTCTGCTCATCGTCGGTGCTGGGCAGGTGTCGCGCTATCTCGCGCAAATGGCGCAAGCACTG
GACTACGACGTTACCGTCTGCGATCCGCGTGAGGAATATGGGCCAACGTGGGATGTGCCTGGCGCGCGTCTGGCGACCAC
CATGCCGGACGACACGCTGCTCGCCATGGCGCCGGACGCCCGCTGCGCGGTGGTGGCGCTCACGCACGATCCGAAGCTCG
ATGACATGGTGCTGCTGGAAGCGCTCAGGTCCCCGGCGTTCTACGTGGGTGCCCTGGGTTCCCATTTGAACAGCATGCGC
CGACGAGAACGACTTGCGCAGTACTTCGACTTCACGGAAGAGGCGTTGGCGCGCCTGCACGGCCCGGTCGGTTTGCCCAT
CGGCAGCCACACACCGCCCGAGATTGCCGTTGCCATTCTCGCCGAGATGACGGCCGTGAAAAACGGCGCGGCGTTGCCGG
TGACACGAACGACAGCAGCGACACAGACAGATCACGCCTCTGCATGTGAAGTGCCTTGA

Upstream 100 bases:

>100_bases
CGATCCGCCCCGAAGCGTTGACCGCTTGATGCAAGGCGTTGATCTACAGGTACTGGCCGCCGCACGGCAATGGGCGGCCG
AGGGGCGGCGCTTTGCGCTT

Downstream 100 bases:

>100_bases
CCCACGTTAGCCCCAGGGGGAATAAGCCATGTACAAAACATGTTTGTCGTTGATTCTGGCCTGGATGGGCGCAAGCGCTC
AGGCCAGCGACGCGCTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTVARTWGSAPRPPGSWLALREDGLVQGSVSGGCVEDDLIARMRDGCLCGSLPFVCRYGVTKDEATRFGLPCGGTLELVV
EPAPDVALLKALAERLARRELVLRHVDVARGTTSITSAQRDSALTWDGTRLTMVYGPQWRLLIVGAGQVSRYLAQMAQAL
DYDVTVCDPREEYGPTWDVPGARLATTMPDDTLLAMAPDARCAVVALTHDPKLDDMVLLEALRSPAFYVGALGSHLNSMR
RRERLAQYFDFTEEALARLHGPVGLPIGSHTPPEIAVAILAEMTAVKNGAALPVTRTTAATQTDHASACEVP

Sequences:

>Translated_312_residues
MTVARTWGSAPRPPGSWLALREDGLVQGSVSGGCVEDDLIARMRDGCLCGSLPFVCRYGVTKDEATRFGLPCGGTLELVV
EPAPDVALLKALAERLARRELVLRHVDVARGTTSITSAQRDSALTWDGTRLTMVYGPQWRLLIVGAGQVSRYLAQMAQAL
DYDVTVCDPREEYGPTWDVPGARLATTMPDDTLLAMAPDARCAVVALTHDPKLDDMVLLEALRSPAFYVGALGSHLNSMR
RRERLAQYFDFTEEALARLHGPVGLPIGSHTPPEIAVAILAEMTAVKNGAALPVTRTTAATQTDHASACEVP
>Mature_311_residues
TVARTWGSAPRPPGSWLALREDGLVQGSVSGGCVEDDLIARMRDGCLCGSLPFVCRYGVTKDEATRFGLPCGGTLELVVE
PAPDVALLKALAERLARRELVLRHVDVARGTTSITSAQRDSALTWDGTRLTMVYGPQWRLLIVGAGQVSRYLAQMAQALD
YDVTVCDPREEYGPTWDVPGARLATTMPDDTLLAMAPDARCAVVALTHDPKLDDMVLLEALRSPAFYVGALGSHLNSMRR
RERLAQYFDFTEEALARLHGPVGLPIGSHTPPEIAVAILAEMTAVKNGAALPVTRTTAATQTDHASACEVP

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=258, Percent_Identity=32.5581395348837, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1786477, Length=297, Percent_Identity=26.5993265993266, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 33564; Mature: 33433

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVARTWGSAPRPPGSWLALREDGLVQGSVSGGCVEDDLIARMRDGCLCGSLPFVCRYGV
CCEECCCCCCCCCCCCEEEEECCCCEEECCCCCCCCHHHHHHHHCCCEECCCHHHHCCCC
TKDEATRFGLPCGGTLELVVEPAPDVALLKALAERLARRELVLRHVDVARGTTSITSAQR
CCCCHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
DSALTWDGTRLTMVYGPQWRLLIVGAGQVSRYLAQMAQALDYDVTVCDPREEYGPTWDVP
CCCEEECCEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHCCCEEEECCHHHCCCCCCCC
GARLATTMPDDTLLAMAPDARCAVVALTHDPKLDDMVLLEALRSPAFYVGALGSHLNSMR
CCEEEECCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHH
RRERLAQYFDFTEEALARLHGPVGLPIGSHTPPEIAVAILAEMTAVKNGAALPVTRTTAA
HHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCC
TQTDHASACEVP
CCCCCCCCCCCC
>Mature Secondary Structure 
TVARTWGSAPRPPGSWLALREDGLVQGSVSGGCVEDDLIARMRDGCLCGSLPFVCRYGV
CEECCCCCCCCCCCCEEEEECCCCEEECCCCCCCCHHHHHHHHCCCEECCCHHHHCCCC
TKDEATRFGLPCGGTLELVVEPAPDVALLKALAERLARRELVLRHVDVARGTTSITSAQR
CCCCHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC
DSALTWDGTRLTMVYGPQWRLLIVGAGQVSRYLAQMAQALDYDVTVCDPREEYGPTWDVP
CCCEEECCEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHCCCEEEECCHHHCCCCCCCC
GARLATTMPDDTLLAMAPDARCAVVALTHDPKLDDMVLLEALRSPAFYVGALGSHLNSMR
CCEEEECCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHH
RRERLAQYFDFTEEALARLHGPVGLPIGSHTPPEIAVAILAEMTAVKNGAALPVTRTTAA
HHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCC
TQTDHASACEVP
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]