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The map label for this gene is 17545338

Identifier: 17545338

GI number: 17545338

Start: 666136

End: 666774

Strand: Direct

Name: 17545338

Synonym: RSc0619

Alternate gene names: NA

Gene position: 666136-666774 (Clockwise)

Preceding gene: 17545337

Following gene: 17545339

Centisome position: 17.92

GC content: 59.62

Gene sequence:

>639_bases
GTGAAGACTGCACGGCAATCGGCGGCGATCAGACCAAAGCCTCGCACAAGCCCGTCCGCCACGCTTCAGCCAGCCTGGCT
GCGCATCACGCACTGGCTCAATGCGATCGCGGTCATCATCATGATGCTCAGCGGCTGGCGTATCTACAACTCTTCACCGC
TGTTCGCCTTCCGTTTTCCCAACGAAATCACGCTCGGCGGCTGGCTTGCCGGCGCACTGCAATGGCACTTTGCCGCCATG
TGGCTGCTGGTGGCTAACGGTCTGGTTTACCTGGCACTGAATGTTGTTACCGGCCGATTCTGGAGGCGCTTCATACCGGT
CTCCATTCCTTCCGCTCTGCACGACATGGTTGCGGCCCTGCGAGGAAGGCTCTCGCACGCCAATCTGGCCGAATACAACG
CTGCGCAGAAGCTGCTCTATCTCGGGGTGGTCGCCGTGATCGTGATCACGGTCCTGTCTGGCCTCGCCATCTGGAAGTCA
GTGCAGTTTCCGCTGCTTCGAATGCTGATGGGAGGGTATGACGCGGCGCGATGGGTGCATTTCATTGGCATGAGCGCGAT
CGCCCTCTTCATTGTCGTCCATGTGGTGATGACTGTACTGGTACCACGCACACTCATCATCATGCTGCGCGGCCGCTAG

Upstream 100 bases:

>100_bases
CGAGAGAGATTCGATGGCGCTGTTTCAGTTTGTGCCGCGAGGAACGACAAACGTGGTGTAAGCGGCGGCGGCCACTGACC
AACCCATCTCGGAGGGGGGC

Downstream 100 bases:

>100_bases
GCTGCATTAAGGGGAAGTGTCGTGAGCACGCCCGAAGAGATCGTCCGGTTAGACCGCAAGCTGATCCTGCGCGATGCCAC
CCGCGAGTTGAGCATGCCGT

Product: transmembrane hydrogenase cytochrome B- type subunit

Products: NA

Alternate protein names: Cytochrome B; Transmembrane Hydrogenase Cytochrome B-Type Subunit; HupC/HyaC/HydC Family Protein; Thiosulfate Reductase Cytochrome Subunit B; Thiosulfate Reductase Cytochrome B Subunit-Like Protein; Thiosulfate Reductase Cytochrome Subunit B-Like Protein; Transmembrane B-Type Cytochrome Protein; Transmembrane Hydrogenase Cytochrome B- Type Subunit; Ni/Fe-Hydrogenase B-Type Cytochrome Subunit; Cytochrome; Cytochrome B/B6 Domain Protein; Conserved Protein; B-Type Cytochomre; [Ni/Fe] Hydrogenase B-Type Cytochrome Subunit; Transmembrane Hydrogenase Cytochrome

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKTARQSAAIRPKPRTSPSATLQPAWLRITHWLNAIAVIIMMLSGWRIYNSSPLFAFRFPNEITLGGWLAGALQWHFAAM
WLLVANGLVYLALNVVTGRFWRRFIPVSIPSALHDMVAALRGRLSHANLAEYNAAQKLLYLGVVAVIVITVLSGLAIWKS
VQFPLLRMLMGGYDAARWVHFIGMSAIALFIVVHVVMTVLVPRTLIIMLRGR

Sequences:

>Translated_212_residues
MKTARQSAAIRPKPRTSPSATLQPAWLRITHWLNAIAVIIMMLSGWRIYNSSPLFAFRFPNEITLGGWLAGALQWHFAAM
WLLVANGLVYLALNVVTGRFWRRFIPVSIPSALHDMVAALRGRLSHANLAEYNAAQKLLYLGVVAVIVITVLSGLAIWKS
VQFPLLRMLMGGYDAARWVHFIGMSAIALFIVVHVVMTVLVPRTLIIMLRGR
>Mature_212_residues
MKTARQSAAIRPKPRTSPSATLQPAWLRITHWLNAIAVIIMMLSGWRIYNSSPLFAFRFPNEITLGGWLAGALQWHFAAM
WLLVANGLVYLALNVVTGRFWRRFIPVSIPSALHDMVAALRGRLSHANLAEYNAAQKLLYLGVVAVIVITVLSGLAIWKS
VQFPLLRMLMGGYDAARWVHFIGMSAIALFIVVHVVMTVLVPRTLIIMLRGR

Specific function: Unknown

COG id: COG4117

COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23684; Mature: 23684

Theoretical pI: Translated: 12.30; Mature: 12.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTARQSAAIRPKPRTSPSATLQPAWLRITHWLNAIAVIIMMLSGWRIYNSSPLFAFRFP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEECC
NEITLGGWLAGALQWHFAAMWLLVANGLVYLALNVVTGRFWRRFIPVSIPSALHDMVAAL
CCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RGRLSHANLAEYNAAQKLLYLGVVAVIVITVLSGLAIWKSVQFPLLRMLMGGYDAARWVH
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
FIGMSAIALFIVVHVVMTVLVPRTLIIMLRGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure
MKTARQSAAIRPKPRTSPSATLQPAWLRITHWLNAIAVIIMMLSGWRIYNSSPLFAFRFP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEECC
NEITLGGWLAGALQWHFAAMWLLVANGLVYLALNVVTGRFWRRFIPVSIPSALHDMVAAL
CCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RGRLSHANLAEYNAAQKLLYLGVVAVIVITVLSGLAIWKSVQFPLLRMLMGGYDAARWVH
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
FIGMSAIALFIVVHVVMTVLVPRTLIIMLRGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA