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The map label for this gene is rdgC [H]

Identifier: 17545337

GI number: 17545337

Start: 664810

End: 665733

Strand: Direct

Name: rdgC [H]

Synonym: RSc0618

Alternate gene names: 17545337

Gene position: 664810-665733 (Clockwise)

Preceding gene: 17545334

Following gene: 17545338

Centisome position: 17.89

GC content: 62.77

Gene sequence:

>924_bases
ATGTGGTTCAAGAATCTTCAGCTTCATCGTCTTCCGGCACCTTGGGCCGTTGCCCCTGATCAGATTGAAAAATGGCTGGC
GCCCCACGCGTTTCAACCAGGCAACAGCGTCGAGAAGCAGTGTTCCGGATGGGCATCGCCACGCGATGACGGCGCGCTCG
TGTACTCGATCAACCGGCAGATGCTGCTGGTGTTTCGTGCCGAAAAGAAGCTGCTCCCGGCGTCGGTCGTCAATCAGGTG
ACCAAGGCCCGGGCGCTTGAAGTCGAGGAGCAGCAGGGCTTCAAGCTCGGGCGAAAACAGCTGCGCGAACTCAAGGAGCA
GGTGACCGACGAATTGCTGCCGCGCGCGTTCACCATTCGCCGCGATACCCGTGTGTGGATCGATACGGCAAACGGCTGGC
TCGTCATCGATGCAGCTGCGCAGGCGCTTGGCGACGACGTTCGCGGCCTGCTCGTGAAATCGATCGATCAGTTGCCGCTC
GCCAGCGTTCGCGTGGCGCTTTCGCCGGTTGCCGCGATGACGGATTGGTTGCTGTCCGGCGAGGCGCCGGGCGGATTCAC
CGTGGACCAGGACGCCGAGCTGCGCTCGAGCGGTGAAGGCGGCGCTACGGTGCGATACGTCGGCCACGCGCTGGAAGCGG
ACGACATGCGGCGGCACATCGAAGCCGGCAAACAATGCGTGCGCCTCGCGATGACCTGGGATAACCGGATCTCCTTCGTG
CTGACGCCGTCGCTGACGATCAAGCGTGTCACGCCGCTGGACGTGATCAAGGAGGCGGCGGACCCAACCGCGCAAAACGA
CGACGAACGCTTCGAGTCGGATGTCGCGCTGATGACGGGTGAATTGGGACGGATGTTGACCGATCTTGTCGATATCCTGG
GCGGCGATCAGCACGACTCGATGCATCAGGCCGCAGCAGCCTGA

Upstream 100 bases:

>100_bases
TCGACCCTTCTCTGCCGTTCGACTTTGATCCGTCCGAATGGTCGCAATGGGCCGGGAAGCGCCGCCGTCATTTAGAATTG
CACACTTTGCCCGTACAGCC

Downstream 100 bases:

>100_bases
ACTTTGTCGGCTGGTGTCGAGATTCACTCAACTTTGAACCGGCGGCCCGCGATTTACAGGCGTTCTCGGCGGAGCTGCCT
GGCCAACTTTGAACTCTTGG

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MWFKNLQLHRLPAPWAVAPDQIEKWLAPHAFQPGNSVEKQCSGWASPRDDGALVYSINRQMLLVFRAEKKLLPASVVNQV
TKARALEVEEQQGFKLGRKQLRELKEQVTDELLPRAFTIRRDTRVWIDTANGWLVIDAAAQALGDDVRGLLVKSIDQLPL
ASVRVALSPVAAMTDWLLSGEAPGGFTVDQDAELRSSGEGGATVRYVGHALEADDMRRHIEAGKQCVRLAMTWDNRISFV
LTPSLTIKRVTPLDVIKEAADPTAQNDDERFESDVALMTGELGRMLTDLVDILGGDQHDSMHQAAAA

Sequences:

>Translated_307_residues
MWFKNLQLHRLPAPWAVAPDQIEKWLAPHAFQPGNSVEKQCSGWASPRDDGALVYSINRQMLLVFRAEKKLLPASVVNQV
TKARALEVEEQQGFKLGRKQLRELKEQVTDELLPRAFTIRRDTRVWIDTANGWLVIDAAAQALGDDVRGLLVKSIDQLPL
ASVRVALSPVAAMTDWLLSGEAPGGFTVDQDAELRSSGEGGATVRYVGHALEADDMRRHIEAGKQCVRLAMTWDNRISFV
LTPSLTIKRVTPLDVIKEAADPTAQNDDERFESDVALMTGELGRMLTDLVDILGGDQHDSMHQAAAA
>Mature_307_residues
MWFKNLQLHRLPAPWAVAPDQIEKWLAPHAFQPGNSVEKQCSGWASPRDDGALVYSINRQMLLVFRAEKKLLPASVVNQV
TKARALEVEEQQGFKLGRKQLRELKEQVTDELLPRAFTIRRDTRVWIDTANGWLVIDAAAQALGDDVRGLLVKSIDQLPL
ASVRVALSPVAAMTDWLLSGEAPGGFTVDQDAELRSSGEGGATVRYVGHALEADDMRRHIEAGKQCVRLAMTWDNRISFV
LTPSLTIKRVTPLDVIKEAADPTAQNDDERFESDVALMTGELGRMLTDLVDILGGDQHDSMHQAAAA

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=299, Percent_Identity=34.7826086956522, Blast_Score=190, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 33937; Mature: 33937

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFKNLQLHRLPAPWAVAPDQIEKWLAPHAFQPGNSVEKQCSGWASPRDDGALVYSINRQ
CCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCE
MLLVFRAEKKLLPASVVNQVTKARALEVEEQQGFKLGRKQLRELKEQVTDELLPRAFTIR
EEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEE
RDTRVWIDTANGWLVIDAAAQALGDDVRGLLVKSIDQLPLASVRVALSPVAAMTDWLLSG
CCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
EAPGGFTVDQDAELRSSGEGGATVRYVGHALEADDMRRHIEAGKQCVRLAMTWDNRISFV
CCCCCCCCCCCCHHHCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHEEECCCEEEE
LTPSLTIKRVTPLDVIKEAADPTAQNDDERFESDVALMTGELGRMLTDLVDILGGDQHDS
ECCCCEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
MHQAAAA
HHHHHCC
>Mature Secondary Structure
MWFKNLQLHRLPAPWAVAPDQIEKWLAPHAFQPGNSVEKQCSGWASPRDDGALVYSINRQ
CCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCE
MLLVFRAEKKLLPASVVNQVTKARALEVEEQQGFKLGRKQLRELKEQVTDELLPRAFTIR
EEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEE
RDTRVWIDTANGWLVIDAAAQALGDDVRGLLVKSIDQLPLASVRVALSPVAAMTDWLLSG
CCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
EAPGGFTVDQDAELRSSGEGGATVRYVGHALEADDMRRHIEAGKQCVRLAMTWDNRISFV
CCCCCCCCCCCCHHHCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHEEECCCEEEE
LTPSLTIKRVTPLDVIKEAADPTAQNDDERFESDVALMTGELGRMLTDLVDILGGDQHDS
ECCCCEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
MHQAAAA
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA