| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545310
Identifier: 17545310
GI number: 17545310
Start: 637101
End: 637445
Strand: Reverse
Name: 17545310
Synonym: RSc0591
Alternate gene names: NA
Gene position: 637445-637101 (Counterclockwise)
Preceding gene: 17545317
Following gene: 17545308
Centisome position: 17.15
GC content: 61.45
Gene sequence:
>345_bases ATGGCACAGCACGATCCTTCATCCCTACGCAGGCCGCCGTCCACCAATGACTTCGCGCTCAACCGCGACGCCATTCGCTG GCTCGCGCAATTGCCCGATGAAGTCCGGCCGATCGAGCTCGGCCGCCAGTTTCCGCGCATCATCAACACCATTGCCGCCA AATGGGTCGATTTCATCGGCTGCCGGCGTTATCTCAACAGCCTGCAGATCGATGAGCGCGGCGGACGCCAGGGCTTTCCG TTCGTGATCGTGCAGGAGATCTGCACGCTGCGCGAATACTTCGATTCGCTCTACCCGCCCGAGAAGGATCTCTGGCAGAA GGCGATCGACGCGGGCAAGCGCTAA
Upstream 100 bases:
>100_bases CGCTGCACCGCACCAAGTCCTGCTCCGTGAGACCCACGTCCGGCGGGCTGTCGGCCGGCGCAGCGGCGACATACACTGGA TTGAATGACCCATGGGTGAT
Downstream 100 bases:
>100_bases GGTCGGCTGTCGCACGTGCGGCGCCCGGGCCGGCAGGCGCCGGGATCCGCCAACCGTCAGGCCGGGCCGGCCGCCAGCTT GTTGAGCAGTTCCAGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MAQHDPSSLRRPPSTNDFALNRDAIRWLAQLPDEVRPIELGRQFPRIINTIAAKWVDFIGCRRYLNSLQIDERGGRQGFP FVIVQEICTLREYFDSLYPPEKDLWQKAIDAGKR
Sequences:
>Translated_114_residues MAQHDPSSLRRPPSTNDFALNRDAIRWLAQLPDEVRPIELGRQFPRIINTIAAKWVDFIGCRRYLNSLQIDERGGRQGFP FVIVQEICTLREYFDSLYPPEKDLWQKAIDAGKR >Mature_113_residues AQHDPSSLRRPPSTNDFALNRDAIRWLAQLPDEVRPIELGRQFPRIINTIAAKWVDFIGCRRYLNSLQIDERGGRQGFPF VIVQEICTLREYFDSLYPPEKDLWQKAIDAGKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13314; Mature: 13183
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQHDPSSLRRPPSTNDFALNRDAIRWLAQLPDEVRPIELGRQFPRIINTIAAKWVDFIG CCCCCCHHCCCCCCCCCCCCCHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH CRRYLNSLQIDERGGRQGFPFVIVQEICTLREYFDSLYPPEKDLWQKAIDAGKR HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC >Mature Secondary Structure AQHDPSSLRRPPSTNDFALNRDAIRWLAQLPDEVRPIELGRQFPRIINTIAAKWVDFIG CCCCCHHCCCCCCCCCCCCCHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH CRRYLNSLQIDERGGRQGFPFVIVQEICTLREYFDSLYPPEKDLWQKAIDAGKR HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA