| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545317
Identifier: 17545317
GI number: 17545317
Start: 643964
End: 644317
Strand: Reverse
Name: 17545317
Synonym: RSc0598
Alternate gene names: NA
Gene position: 644317-643964 (Counterclockwise)
Preceding gene: 17545319
Following gene: 17545310
Centisome position: 17.34
GC content: 73.45
Gene sequence:
>354_bases ATGACCGCTGCAACAACGTTCATAGACCGGCTGGCCCTGCCGGCCGGACAGAGCCGACGACACTGGCTGCCGGCCGGGAC GATCATCGTGACGCTGGAGGGCCGGTTGATGCTGGAGCCGCCCCTGCGCTGGCTGGCCGGCGACATGGTGCGCCTGTGTC ACACCGTGGGCGCGGGCCATGCCCACACGCTGGAGACTTCCGGCTGGTGGAGCCTGCACGCGGATGCAAGCGTGGGCCTC CACCTGCGCCTGGTGGCGCCGGCGTCATCCGCCTCGCGCTGGCCGGACGGCCTGGTCCGCGCCGGCCGCTGGCTGCTGGC CGCCCTGCAGCCGCGCCGGACCTCTCGCGGCTGA
Upstream 100 bases:
>100_bases GACGGCCTCGCCTGCCCTGCTCTGGTGCAATCGTTAACGTCTGTGTCTGTTGGTACCAACGGGCCTGTCCTACCCTGCAG CCATACATTCGGAGACCGAC
Downstream 100 bases:
>100_bases GGCCGCAAGGGCTACGGCTTGCGGCCGGATCCGGGCGGCGGCTTGCGCGCTTCGTCGCCGGGCTCGCGCCGCAGCGAAGC GGCTTCGAAATCGCCCGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MTAATTFIDRLALPAGQSRRHWLPAGTIIVTLEGRLMLEPPLRWLAGDMVRLCHTVGAGHAHTLETSGWWSLHADASVGL HLRLVAPASSASRWPDGLVRAGRWLLAALQPRRTSRG
Sequences:
>Translated_117_residues MTAATTFIDRLALPAGQSRRHWLPAGTIIVTLEGRLMLEPPLRWLAGDMVRLCHTVGAGHAHTLETSGWWSLHADASVGL HLRLVAPASSASRWPDGLVRAGRWLLAALQPRRTSRG >Mature_116_residues TAATTFIDRLALPAGQSRRHWLPAGTIIVTLEGRLMLEPPLRWLAGDMVRLCHTVGAGHAHTLETSGWWSLHADASVGLH LRLVAPASSASRWPDGLVRAGRWLLAALQPRRTSRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12759; Mature: 12628
Theoretical pI: Translated: 12.15; Mature: 12.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAATTFIDRLALPAGQSRRHWLPAGTIIVTLEGRLMLEPPLRWLAGDMVRLCHTVGAGH CCHHHHHHHHHCCCCCCCCCEECCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHHCCCC AHTLETSGWWSLHADASVGLHLRLVAPASSASRWPDGLVRAGRWLLAALQPRRTSRG CEEECCCCCEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TAATTFIDRLALPAGQSRRHWLPAGTIIVTLEGRLMLEPPLRWLAGDMVRLCHTVGAGH CHHHHHHHHHCCCCCCCCCEECCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHHCCCC AHTLETSGWWSLHADASVGLHLRLVAPASSASRWPDGLVRAGRWLLAALQPRRTSRG CEEECCCCCEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA