| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is mprA [C]
Identifier: 17545309
GI number: 17545309
Start: 636508
End: 637044
Strand: Direct
Name: mprA [C]
Synonym: RSc0590
Alternate gene names: 17545309
Gene position: 636508-637044 (Clockwise)
Preceding gene: 17545307
Following gene: 17545311
Centisome position: 17.13
GC content: 70.02
Gene sequence:
>537_bases ATGGTCGGATTGCCCACGATCGATGCCGCCATGCCGAGCCTGACCCACATCGAAGACGCCTATCCCGCCGTGGCCGAGTC CGGCCACTTCAATCCGCGCATGGAGGACGTGGAGTATGGCGCGCTGGATGGGCTGCTCGGCTACGCGGTGCGGCGCGCCC AGCTGCGTGTCTACGAAGACTTCGTGCGCTCGCTGCAGGCGTGGAACATCACGCCGCCGCGCTTCTCGGCCATGACCGTG ATCGCGCACAACCCCGACCTGAAGCTGACCGAGCTGGCCGGCATCCTGGGCGTGGCCCGCTCGGGGGCGGTGCTGCTGGT CGATACGCTCGAAGCGATGGGCATGGTCGAGCGGCTCCCGTCGCCGGTGGACCGGCGCGCCTTCCGGCTGGCGCTGACCG ACAAGGGAGCGGCCACGCTGCGGGACATCACCGAGGTCGTGGTCGCCCACGATGCGCGGGTCACGGCCCATCTGTCGGCC GACGAGCGGCGCACGCTGCTGGAACTGCTCAACAAGCTGGCGGCCGGCCCGGCCTGA
Upstream 100 bases:
>100_bases GCATGCCGGCCCGGGCCCGCGGCACGCCGCTTTCCCGGCGATGCCGTGAAGAACGGAGCGTCGTCCCGATACGTGGCCGG CGGGTGCACCGCCATCCATA
Downstream 100 bases:
>100_bases CGGTTGGCGGATCCCGGCGCCTGCCGGCCCGGGCGCCGCACGTGCGACAGCCGACCTTAGCGCTTGCCCGCGTCGATCGC CTTCTGCCAGAGATCCTTCT
Product: transcription regulator protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MVGLPTIDAAMPSLTHIEDAYPAVAESGHFNPRMEDVEYGALDGLLGYAVRRAQLRVYEDFVRSLQAWNITPPRFSAMTV IAHNPDLKLTELAGILGVARSGAVLLVDTLEAMGMVERLPSPVDRRAFRLALTDKGAATLRDITEVVVAHDARVTAHLSA DERRTLLELLNKLAAGPA
Sequences:
>Translated_178_residues MVGLPTIDAAMPSLTHIEDAYPAVAESGHFNPRMEDVEYGALDGLLGYAVRRAQLRVYEDFVRSLQAWNITPPRFSAMTV IAHNPDLKLTELAGILGVARSGAVLLVDTLEAMGMVERLPSPVDRRAFRLALTDKGAATLRDITEVVVAHDARVTAHLSA DERRTLLELLNKLAAGPA >Mature_178_residues MVGLPTIDAAMPSLTHIEDAYPAVAESGHFNPRMEDVEYGALDGLLGYAVRRAQLRVYEDFVRSLQAWNITPPRFSAMTV IAHNPDLKLTELAGILGVARSGAVLLVDTLEAMGMVERLPSPVDRRAFRLALTDKGAATLRDITEVVVAHDARVTAHLSA DERRTLLELLNKLAAGPA
Specific function: May be involved in the regulation of genes for 4- hydroxybenzoyl-CoA reductase [H]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH marR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000835 - InterPro: IPR023187 - InterPro: IPR011991 [H]
Pfam domain/function: PF01047 MarR [H]
EC number: NA
Molecular weight: Translated: 19309; Mature: 19309
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGLPTIDAAMPSLTHIEDAYPAVAESGHFNPRMEDVEYGALDGLLGYAVRRAQLRVYED CCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FVRSLQAWNITPPRFSAMTVIAHNPDLKLTELAGILGVARSGAVLLVDTLEAMGMVERLP HHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCC SPVDRRAFRLALTDKGAATLRDITEVVVAHDARVTAHLSADERRTLLELLNKLAAGPA CCHHHHHEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVGLPTIDAAMPSLTHIEDAYPAVAESGHFNPRMEDVEYGALDGLLGYAVRRAQLRVYED CCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FVRSLQAWNITPPRFSAMTVIAHNPDLKLTELAGILGVARSGAVLLVDTLEAMGMVERLP HHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCC SPVDRRAFRLALTDKGAATLRDITEVVVAHDARVTAHLSADERRTLLELLNKLAAGPA CCHHHHHEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9490068 [H]