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The map label for this gene is rpfG [H]

Identifier: 17545311

GI number: 17545311

Start: 637759

End: 638970

Strand: Direct

Name: rpfG [H]

Synonym: RSc0592

Alternate gene names: 17545311

Gene position: 637759-638970 (Clockwise)

Preceding gene: 17545309

Following gene: 17545312

Centisome position: 17.16

GC content: 65.51

Gene sequence:

>1212_bases
ATGAAGCGAATCGATGCGAATCAGCTGCGTGTCGGTATGTTTGTGGTGAAGCTGGGCGGGTCCTGGCTGAAGCACCCGTT
CTGGCGTTCGCAGTTCCAACTGTCGAGCCAGGCACAGGTCGACGATATCTGTCGAGCCGGTATTACCGAGATCTGGATCG
ACCCCGAGCGCGGCGAAGATGTGCTTGCGCCCGCGCTGATGCCGGCGGCGGCGCAGCCCGCTCCGGAGCCGCTGACCCGC
GAGACCCTGGCGGCGCTGCCGCCGGTCACGCCGACTTCCCTCAAGGAAGAATGGAAGCATGCCCAGCAACTGGTGCAGAG
CGGCAAGGCGACGCTGGGCCAGCTGTTCTCCGAGGCCCGCATGGGCCGCGCCTTGCAGACCGACAAGGCGCTGCTGCTGG
TCGACAACGTGTCCAATTCGCTGGCGCGCAACTCGTATGCGCTGATTGCCCTGGCTCGCCTGAAGAACAAGGACGACTAC
ACCTACCTGCATTCGTTCGCCGTCTGCGCGCTGATGGTGGCTCTGGCCCGCACGCTCGGCCTGTCCGAAGACGAGATCCG
CGAATGCGGTCTGGGCGGCCTGGTCCACGACATCGGCAAGTCGGCCATGCCGCGCACGCTGCTCGACAAGAGCACCGCGC
TGACCAAGGAAGAACTGGCCCTGCTGCAGACCCACGCGGTCGGCGGGCACCACCTGCTGATCGGGACCGGCCAGTTCAGC
GAGATTCCGCGCGAAGTGTGCCTGCATCACCATGAGCGCATCGACGGCAGCGGCTATCCGGACGGCCAGAAGGGCGACGA
GATCAGCCTGTGGGCCAAGATGGGCGCCATCTGCGACGTGTACGACACGCTCACGTCCAGCAGCCCCTACCACCATGCGT
GGTCGCCGGCGCAGGCGCTCAAGTACATGATGGCGCGCACCGACAGCCAGTTCGACCGTACCGTGTTCCAGGCGTTTACG
CGCAGCGTGGGCATCTATCCGGTCGGCACGCTGGTCAAGCTGCGCACCAACCGGCTGGGCGTGGTGGTGCACCAGAACGA
GTCGTCCGCGCTGCGTCCGGACGTCGTCGTGTTTTATTCCGGCAATACCAAGACGCGCGTGCGCCCCGAGCGCATCAGCC
TGGGCCGTTCGGACGACGCCATCATCACGGTGGAGGACGCCTCCACCTGGGGCCTGTCGGAAGAGGAAGTGTCCGACATG
TGCCTGGTCTGA

Upstream 100 bases:

>100_bases
GCACCCATGACGGCAGCGAGGACGGCGCCAGTGTCGGCTGGCATCCCGCATCCCACATTCCATCAAATCAAAACGGACAT
TGAGCCGAGGCAGGTAGGGT

Downstream 100 bases:

>100_bases
GCCCGCATCGCCGGATGGTCGGATATTCCTGACGAGGGGTTCCCCGCGCGCCGGCCGGTCGGGCCGGATGGTGCGGGGCG
CCTGCCCGCTGCCGGCCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MKRIDANQLRVGMFVVKLGGSWLKHPFWRSQFQLSSQAQVDDICRAGITEIWIDPERGEDVLAPALMPAAAQPAPEPLTR
ETLAALPPVTPTSLKEEWKHAQQLVQSGKATLGQLFSEARMGRALQTDKALLLVDNVSNSLARNSYALIALARLKNKDDY
TYLHSFAVCALMVALARTLGLSEDEIRECGLGGLVHDIGKSAMPRTLLDKSTALTKEELALLQTHAVGGHHLLIGTGQFS
EIPREVCLHHHERIDGSGYPDGQKGDEISLWAKMGAICDVYDTLTSSSPYHHAWSPAQALKYMMARTDSQFDRTVFQAFT
RSVGIYPVGTLVKLRTNRLGVVVHQNESSALRPDVVVFYSGNTKTRVRPERISLGRSDDAIITVEDASTWGLSEEEVSDM
CLV

Sequences:

>Translated_403_residues
MKRIDANQLRVGMFVVKLGGSWLKHPFWRSQFQLSSQAQVDDICRAGITEIWIDPERGEDVLAPALMPAAAQPAPEPLTR
ETLAALPPVTPTSLKEEWKHAQQLVQSGKATLGQLFSEARMGRALQTDKALLLVDNVSNSLARNSYALIALARLKNKDDY
TYLHSFAVCALMVALARTLGLSEDEIRECGLGGLVHDIGKSAMPRTLLDKSTALTKEELALLQTHAVGGHHLLIGTGQFS
EIPREVCLHHHERIDGSGYPDGQKGDEISLWAKMGAICDVYDTLTSSSPYHHAWSPAQALKYMMARTDSQFDRTVFQAFT
RSVGIYPVGTLVKLRTNRLGVVVHQNESSALRPDVVVFYSGNTKTRVRPERISLGRSDDAIITVEDASTWGLSEEEVSDM
CLV
>Mature_403_residues
MKRIDANQLRVGMFVVKLGGSWLKHPFWRSQFQLSSQAQVDDICRAGITEIWIDPERGEDVLAPALMPAAAQPAPEPLTR
ETLAALPPVTPTSLKEEWKHAQQLVQSGKATLGQLFSEARMGRALQTDKALLLVDNVSNSLARNSYALIALARLKNKDDY
TYLHSFAVCALMVALARTLGLSEDEIRECGLGGLVHDIGKSAMPRTLLDKSTALTKEELALLQTHAVGGHHLLIGTGQFS
EIPREVCLHHHERIDGSGYPDGQKGDEISLWAKMGAICDVYDTLTSSSPYHHAWSPAQALKYMMARTDSQFDRTVFQAFT
RSVGIYPVGTLVKLRTNRLGVVVHQNESSALRPDVVVFYSGNTKTRVRPERISLGRSDDAIITVEDASTWGLSEEEVSDM
CLV

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 44401; Mature: 44401

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIDANQLRVGMFVVKLGGSWLKHPFWRSQFQLSSQAQVDDICRAGITEIWIDPERGED
CCCCCCCHHEEEEEEEEECCHHHCCCHHHHHHCCCCCCCHHHHHHCCCCEEEECCCCCCC
VLAPALMPAAAQPAPEPLTRETLAALPPVTPTSLKEEWKHAQQLVQSGKATLGQLFSEAR
HHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
MGRALQTDKALLLVDNVSNSLARNSYALIALARLKNKDDYTYLHSFAVCALMVALARTLG
HCCHHCCCCEEEEEECCHHHHHHCCHHEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHC
LSEDEIRECGLGGLVHDIGKSAMPRTLLDKSTALTKEELALLQTHAVGGHHLLIGTGQFS
CCHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHH
EIPREVCLHHHERIDGSGYPDGQKGDEISLWAKMGAICDVYDTLTSSSPYHHAWSPAQAL
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHH
KYMMARTDSQFDRTVFQAFTRSVGIYPVGTLVKLRTNRLGVVVHQNESSALRPDVVVFYS
HHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCEEEEEC
GNTKTRVRPERISLGRSDDAIITVEDASTWGLSEEEVSDMCLV
CCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MKRIDANQLRVGMFVVKLGGSWLKHPFWRSQFQLSSQAQVDDICRAGITEIWIDPERGED
CCCCCCCHHEEEEEEEEECCHHHCCCHHHHHHCCCCCCCHHHHHHCCCCEEEECCCCCCC
VLAPALMPAAAQPAPEPLTRETLAALPPVTPTSLKEEWKHAQQLVQSGKATLGQLFSEAR
HHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
MGRALQTDKALLLVDNVSNSLARNSYALIALARLKNKDDYTYLHSFAVCALMVALARTLG
HCCHHCCCCEEEEEECCHHHHHHCCHHEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHC
LSEDEIRECGLGGLVHDIGKSAMPRTLLDKSTALTKEELALLQTHAVGGHHLLIGTGQFS
CCHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHH
EIPREVCLHHHERIDGSGYPDGQKGDEISLWAKMGAICDVYDTLTSSSPYHHAWSPAQAL
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHH
KYMMARTDSQFDRTVFQAFTRSVGIYPVGTLVKLRTNRLGVVVHQNESSALRPDVVVFYS
HHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCEEEEEC
GNTKTRVRPERISLGRSDDAIITVEDASTWGLSEEEVSDMCLV
CCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]