Click here to switch to the map view.

The map label for this gene is 17545288

Identifier: 17545288

GI number: 17545288

Start: 613077

End: 613400

Strand: Direct

Name: 17545288

Synonym: RSc0569

Alternate gene names: NA

Gene position: 613077-613400 (Clockwise)

Preceding gene: 17545287

Following gene: 17545289

Centisome position: 16.5

GC content: 67.28

Gene sequence:

>324_bases
GTGAGCACGCTCGATATCTGGCTGACCATCTTCGGCATGACGATCGTGACCATCGTCACGCGCGCCCTCTTCCTGATGGT
GGGCGACCGCCTCACGCTGCCGATGCGCGTGCAGCACGCGCTGCGCTTCGCGCCGGCGGCGGCGCTGGCGGCCATCGTGC
TGCCCGATCTGCTGTGGAACCACGGCGGTTTCGACGCCAGCTGGACCAATCCGCGCCTGATGGCCGGCATCGCGGCCACC
GCGTTCTATGTGGCGACGCGGCGGATGCTCGGCATGATCTGCGTCGGCATGGGCGTTTATACCGTGCTGCGCCTCTGGGG
ATAA

Upstream 100 bases:

>100_bases
GCGCGATGGCGGCCGGCCTGGCCGGCGACGAAGCCACCGCTCGCCTGCAATGGCAGCGCCGCGGCGCGCAGCCGGCGCCG
TCCGAGCCGAAGGAGGGGCC

Downstream 100 bases:

>100_bases
AACGTGTCGGCCCATGTCCGCGGCGGCGTCATCTTTGCCTTCCTGGCCTACACGATGTGGGGCCTGTTTCCGCTGTACTT
CAAGCTGCTGAAGGCCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane Component COG

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MSTLDIWLTIFGMTIVTIVTRALFLMVGDRLTLPMRVQHALRFAPAAALAAIVLPDLLWNHGGFDASWTNPRLMAGIAAT
AFYVATRRMLGMICVGMGVYTVLRLWG

Sequences:

>Translated_107_residues
MSTLDIWLTIFGMTIVTIVTRALFLMVGDRLTLPMRVQHALRFAPAAALAAIVLPDLLWNHGGFDASWTNPRLMAGIAAT
AFYVATRRMLGMICVGMGVYTVLRLWG
>Mature_106_residues
STLDIWLTIFGMTIVTIVTRALFLMVGDRLTLPMRVQHALRFAPAAALAAIVLPDLLWNHGGFDASWTNPRLMAGIAATA
FYVATRRMLGMICVGMGVYTVLRLWG

Specific function: Unknown

COG id: COG4392

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11782; Mature: 11651

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLDIWLTIFGMTIVTIVTRALFLMVGDRLTLPMRVQHALRFAPAAALAAIVLPDLLWN
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
HGGFDASWTNPRLMAGIAATAFYVATRRMLGMICVGMGVYTVLRLWG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STLDIWLTIFGMTIVTIVTRALFLMVGDRLTLPMRVQHALRFAPAAALAAIVLPDLLWN
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
HGGFDASWTNPRLMAGIAATAFYVATRRMLGMICVGMGVYTVLRLWG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA