| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is recX
Identifier: 17545271
GI number: 17545271
Start: 597330
End: 597809
Strand: Direct
Name: recX
Synonym: RSc0552
Alternate gene names: 17545271
Gene position: 597330-597809 (Clockwise)
Preceding gene: 17545270
Following gene: 17545272
Centisome position: 16.07
GC content: 68.54
Gene sequence:
>480_bases ATGGCGTTGCCACGTCAACCGCTGTCGCTGAAGGCGAGGGCGCTGGGTTACCTGTCCCGGCGCGAGCACAGCCGCGCGGA GTTGCGCCGCAAGCTGGCTCCCCATGCCGAGTCCGTCGATGAGGTGGAAGCATTGCTGGACTGGCTGGAGGGCGAGAACT GGCTCTCCAACACGCGCTTTGCCGAAAGCGTGGTGCATCGCCGGGCCAGCCGCTATGGCACGGCCCGGCTGATGCAGGAG CTGAAAACCCACGAATTGGGCGACGACGCCCTGGGCGAGGTCAAAGCGCAATTGCAGGCCTCCGAGATGGCGCGCGCCAA GGCGGTCTGGGAGCGCCGCTTCGGGCGCCCGCCCGCCGACATGGCCGAACGTGCCAAGCAGGTGCGGTTCATGGTGGCGC GCGGGTTCTCCCGGGCGGTGGTATCGCGCATCATCCAGGGCGCGGACGCCCTGCTGGACGACGGAGACGAACCGGTCTGA
Upstream 100 bases:
>100_bases GATTGATTGGGTTGGCTGTCGGCGCAGATCGACAGCCGTATCGAGATTGACGCGCCTGCCGTTTCGCGACGGTAGGCGTT TTTCTTTGGAGCGTGTCCGG
Downstream 100 bases:
>100_bases AGATCCCTCGATTGTGCAACCAGTTGCTTGCAAAGTGCGGCGGGGCCGCTGGTCCAGCAGGTTGCACCCTGGGCGTTCGT CGTCACCTGTTCGGCGCGGG
Product: recombination regulator RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MALPRQPLSLKARALGYLSRREHSRAELRRKLAPHAESVDEVEALLDWLEGENWLSNTRFAESVVHRRASRYGTARLMQE LKTHELGDDALGEVKAQLQASEMARAKAVWERRFGRPPADMAERAKQVRFMVARGFSRAVVSRIIQGADALLDDGDEPV
Sequences:
>Translated_159_residues MALPRQPLSLKARALGYLSRREHSRAELRRKLAPHAESVDEVEALLDWLEGENWLSNTRFAESVVHRRASRYGTARLMQE LKTHELGDDALGEVKAQLQASEMARAKAVWERRFGRPPADMAERAKQVRFMVARGFSRAVVSRIIQGADALLDDGDEPV >Mature_158_residues ALPRQPLSLKARALGYLSRREHSRAELRRKLAPHAESVDEVEALLDWLEGENWLSNTRFAESVVHRRASRYGTARLMQEL KTHELGDDALGEVKAQLQASEMARAKAVWERRFGRPPADMAERAKQVRFMVARGFSRAVVSRIIQGADALLDDGDEPV
Specific function: Modulates recA activity
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RECX_RALSO (Q8Y1Y5)
Other databases:
- EMBL: AL646052 - RefSeq: NP_518673.1 - ProteinModelPortal: Q8Y1Y5 - SMR: Q8Y1Y5 - GeneID: 1219357 - GenomeReviews: AL646052_GR - KEGG: rso:RSc0552 - NMPDR: fig|267608.1.peg.552 - HOGENOM: HBG638240 - OMA: AKQMRFL - ProtClustDB: PRK00117 - BioCyc: RSOL267608:RSC0552-MONOMER - GO: GO:0005737 - HAMAP: MF_01114 - InterPro: IPR003783
Pfam domain/function: PF02631 RecX
EC number: NA
Molecular weight: Translated: 17974; Mature: 17842
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPRQPLSLKARALGYLSRREHSRAELRRKLAPHAESVDEVEALLDWLEGENWLSNTRF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHH AESVVHRRASRYGTARLMQELKTHELGDDALGEVKAQLQASEMARAKAVWERRFGRPPAD HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH MAERAKQVRFMVARGFSRAVVSRIIQGADALLDDGDEPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ALPRQPLSLKARALGYLSRREHSRAELRRKLAPHAESVDEVEALLDWLEGENWLSNTRF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHH AESVVHRRASRYGTARLMQELKTHELGDDALGEVKAQLQASEMARAKAVWERRFGRPPAD HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH MAERAKQVRFMVARGFSRAVVSRIIQGADALLDDGDEPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852