| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is lnt
Identifier: 17545246
GI number: 17545246
Start: 565208
End: 566779
Strand: Reverse
Name: lnt
Synonym: RSc0527
Alternate gene names: 17545246
Gene position: 566779-565208 (Counterclockwise)
Preceding gene: 17545247
Following gene: 17545245
Centisome position: 15.25
GC content: 71.82
Gene sequence:
>1572_bases GTGCGCGCTTTGTTCTCCTCTCCTGCCGCCGACACCGCTGGCCAGCAGGAAGCCCTGGCCGTGCCGCTTGCCCGGCTGCG CTTTGCCGCGCCGCTGGCGGCGCTGCTGGGTGTCATGCATACGCTGGCCTTCGCGCCCAACCGCTGGTGGTGGCTGCAGA TCCTGTCGCTGGCCGGGCTGGCGGCGCTGGTCCGGCAGGCACCGCGCCTGCGCGACGTGGCCTGGGTCGGCTACGCCTTC GGGCTGGGCTGGTTCCTGTCGGGCATCTGGTGGCTGTACATCAGCATGCACGTCTACGGCGACATGCCGGCATGGATGGC CGCGGCCGCCGTGCTGCTGTTCTCGGCCTACCTGGCCCTGCACCCGGCGCTCGCGGCATGGCTGTGGCAGCGCCTCGCGC GCGGCCGGCAGTTGTCCGGCGCGGCCAGCGCGCTCGTGTTCGGCGCGGCGTGGCTCGTCTCGGAATGGCTGCGCGGCACG GAATGGACGGGCTTCCCCTGGCTCAACGGCGGTTATGCCCACACCGACGGTCCGCTGGCCGGCTATGCGCCGCTGGTCGG CGTGTATGGCGTCGTCGCGATCGCCGCGACGCTGGCCGGCCTGCTGTGCGCGGCCGCCGAGCGCCGGCTGCACTGGCTGG CCGGGCTCGCGGGCGTGGCCGTGCTGGCGGCCGGCTGGCCGCTGCACACCATCGCGTGGACCCAGCCGGTGGGCAAGCCG ATCACCGTGCGGCTGCTGCAGGGCAACGTGCCGCAGGACGTGAAGTTCCAGCAGACCGGCATCGACCATTCGCTGGCGCT GTACACCAAGATGGTGACCGAGCAGCCCGCCCAGTTGGTGGTGACGCCCGAGACGGCCTTCCCGATCCTGCTCCAGGACA TGCCGCAGGAGATCGCGCTGGCCATCCGCACCTATGTGGACACGACCGGCTCCAGCGTGCTGTTCGGCGCGGCCAACGCG GATTCGGCAGTGGACTACACCAACAGCGCGTTCGGCGTCGGCCCGTGGTTCAAGGGGGTGTATCGCTACGACAAGCACCA CCTCGTGCCCTTCGGCGAATTCATCCCGTTCGGCTTCCACTGGTTCGTCCACATGATGAACATGCCGCTCGGCGACTTCC GCCGCGGCCTGCCGGTGCAGCCGCCCATGCCGGTGGCCGGCCAGCGCGTCGCGCCCAACATCTGCTACGAGGACTTGTTC GGCGAGGAGATCGCCGCATCGCTGCGCCAGGCGGAACGGCCGGCCACGATGCTCGCCAACGTGACCAACCTGGCCTGGTT CGGCGACACCATCGCGCTGGACCAGCACCTGCAGATCTCGCGCATGCGGGCCCTGGAGAGCGGCCGGCCGATGCTGCGCG CGACCAACACCGGCGCCACCGCCGTGGTGCGTCCGGACGGCAGCGTGCAGGCGCGGCTGCCCGTGTTCACGCTCGGCACG CTGCAGGCCGACGTGCAGGGCATGCAGGGCCTGACGCCGTTCGTGCGGACCGGCAACGCGCCCGCGCTGGGCGCCGGTGT GCTGGTGCTGCTGGCCGCGCTGGCGCGCCGCCGCCGCGCCGGAGCGGCGTAA
Upstream 100 bases:
>100_bases GTGCTGCTGGTGCGCCACCTCGCCGCACCCGCGCCGGGCGCCGCCGCCCCGGCCGACCCGTCCCGCTCCAACCCCGCCTG ATCGCCTGAGTTCGTTTTCC
Downstream 100 bases:
>100_bases CCCGGCCCCGTCCGGCGGCTTTTCGCGCACTTTGCGGGACGCTGGACAAAAAACGCTAAAATTCAACGTTTTACGGCGGG GCGCCCAGGCACCCCGCCGC
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MRALFSSPAADTAGQQEALAVPLARLRFAAPLAALLGVMHTLAFAPNRWWWLQILSLAGLAALVRQAPRLRDVAWVGYAF GLGWFLSGIWWLYISMHVYGDMPAWMAAAAVLLFSAYLALHPALAAWLWQRLARGRQLSGAASALVFGAAWLVSEWLRGT EWTGFPWLNGGYAHTDGPLAGYAPLVGVYGVVAIAATLAGLLCAAAERRLHWLAGLAGVAVLAAGWPLHTIAWTQPVGKP ITVRLLQGNVPQDVKFQQTGIDHSLALYTKMVTEQPAQLVVTPETAFPILLQDMPQEIALAIRTYVDTTGSSVLFGAANA DSAVDYTNSAFGVGPWFKGVYRYDKHHLVPFGEFIPFGFHWFVHMMNMPLGDFRRGLPVQPPMPVAGQRVAPNICYEDLF GEEIAASLRQAERPATMLANVTNLAWFGDTIALDQHLQISRMRALESGRPMLRATNTGATAVVRPDGSVQARLPVFTLGT LQADVQGMQGLTPFVRTGNAPALGAGVLVLLAALARRRRAGAA
Sequences:
>Translated_523_residues MRALFSSPAADTAGQQEALAVPLARLRFAAPLAALLGVMHTLAFAPNRWWWLQILSLAGLAALVRQAPRLRDVAWVGYAF GLGWFLSGIWWLYISMHVYGDMPAWMAAAAVLLFSAYLALHPALAAWLWQRLARGRQLSGAASALVFGAAWLVSEWLRGT EWTGFPWLNGGYAHTDGPLAGYAPLVGVYGVVAIAATLAGLLCAAAERRLHWLAGLAGVAVLAAGWPLHTIAWTQPVGKP ITVRLLQGNVPQDVKFQQTGIDHSLALYTKMVTEQPAQLVVTPETAFPILLQDMPQEIALAIRTYVDTTGSSVLFGAANA DSAVDYTNSAFGVGPWFKGVYRYDKHHLVPFGEFIPFGFHWFVHMMNMPLGDFRRGLPVQPPMPVAGQRVAPNICYEDLF GEEIAASLRQAERPATMLANVTNLAWFGDTIALDQHLQISRMRALESGRPMLRATNTGATAVVRPDGSVQARLPVFTLGT LQADVQGMQGLTPFVRTGNAPALGAGVLVLLAALARRRRAGAA >Mature_523_residues MRALFSSPAADTAGQQEALAVPLARLRFAAPLAALLGVMHTLAFAPNRWWWLQILSLAGLAALVRQAPRLRDVAWVGYAF GLGWFLSGIWWLYISMHVYGDMPAWMAAAAVLLFSAYLALHPALAAWLWQRLARGRQLSGAASALVFGAAWLVSEWLRGT EWTGFPWLNGGYAHTDGPLAGYAPLVGVYGVVAIAATLAGLLCAAAERRLHWLAGLAGVAVLAAGWPLHTIAWTQPVGKP ITVRLLQGNVPQDVKFQQTGIDHSLALYTKMVTEQPAQLVVTPETAFPILLQDMPQEIALAIRTYVDTTGSSVLFGAANA DSAVDYTNSAFGVGPWFKGVYRYDKHHLVPFGEFIPFGFHWFVHMMNMPLGDFRRGLPVQPPMPVAGQRVAPNICYEDLF GEEIAASLRQAERPATMLANVTNLAWFGDTIALDQHLQISRMRALESGRPMLRATNTGATAVVRPDGSVQARLPVFTLGT LQADVQGMQGLTPFVRTGNAPALGAGVLVLLAALARRRRAGAA
Specific function: Transfers the fatty acyl group on membrane lipoproteins
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain
Homologues:
Organism=Escherichia coli, GI1786878, Length=521, Percent_Identity=37.0441458733205, Blast_Score=279, Evalue=4e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LNT_RALSO (Q8Y210)
Other databases:
- EMBL: AL646052 - RefSeq: NP_518648.1 - ProteinModelPortal: Q8Y210 - GeneID: 1219331 - GenomeReviews: AL646052_GR - KEGG: rso:RSc0527 - NMPDR: fig|267608.1.peg.527 - HOGENOM: HBG616234 - OMA: IAPYICY - ProtClustDB: PRK00302 - BioCyc: RSOL267608:RSC0527-MONOMER - HAMAP: MF_01148 - InterPro: IPR004563 - InterPro: IPR003010 - Gene3D: G3DSA:3.60.110.10 - TIGRFAMs: TIGR00546
Pfam domain/function: PF00795 CN_hydrolase; SSF56317 Ntlse/CNhydtse
EC number: 2.3.1.- [C]
Molecular weight: Translated: 56513; Mature: 56513
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x13fd1994)-; HASH(0x13b23e84)-; HASH(0x13726a14)-; HASH(0x142cedb4)-; HASH(0x13ac1568)-; HASH(0x134118dc)-;
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALFSSPAADTAGQQEALAVPLARLRFAAPLAALLGVMHTLAFAPNRWWWLQILSLAGL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AALVRQAPRLRDVAWVGYAFGLGWFLSGIWWLYISMHVYGDMPAWMAAAAVLLFSAYLAL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH HPALAAWLWQRLARGRQLSGAASALVFGAAWLVSEWLRGTEWTGFPWLNGGYAHTDGPLA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC GYAPLVGVYGVVAIAATLAGLLCAAAERRLHWLAGLAGVAVLAAGWPLHTIAWTQPVGKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCC ITVRLLQGNVPQDVKFQQTGIDHSLALYTKMVTEQPAQLVVTPETAFPILLQDMPQEIAL EEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCHHHHH AIRTYVDTTGSSVLFGAANADSAVDYTNSAFGVGPWFKGVYRYDKHHLVPFGEFIPFGFH HHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH WFVHMMNMPLGDFRRGLPVQPPMPVAGQRVAPNICYEDLFGEEIAASLRQAERPATMLAN HHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH VTNLAWFGDTIALDQHLQISRMRALESGRPMLRATNTGATAVVRPDGSVQARLPVFTLGT HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCEEECCEEEEHH LQADVQGMQGLTPFVRTGNAPALGAGVLVLLAALARRRRAGAA HHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCH >Mature Secondary Structure MRALFSSPAADTAGQQEALAVPLARLRFAAPLAALLGVMHTLAFAPNRWWWLQILSLAGL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AALVRQAPRLRDVAWVGYAFGLGWFLSGIWWLYISMHVYGDMPAWMAAAAVLLFSAYLAL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH HPALAAWLWQRLARGRQLSGAASALVFGAAWLVSEWLRGTEWTGFPWLNGGYAHTDGPLA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC GYAPLVGVYGVVAIAATLAGLLCAAAERRLHWLAGLAGVAVLAAGWPLHTIAWTQPVGKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCC ITVRLLQGNVPQDVKFQQTGIDHSLALYTKMVTEQPAQLVVTPETAFPILLQDMPQEIAL EEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCHHHHH AIRTYVDTTGSSVLFGAANADSAVDYTNSAFGVGPWFKGVYRYDKHHLVPFGEFIPFGFH HHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH WFVHMMNMPLGDFRRGLPVQPPMPVAGQRVAPNICYEDLFGEEIAASLRQAERPATMLAN HHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH VTNLAWFGDTIALDQHLQISRMRALESGRPMLRATNTGATAVVRPDGSVQARLPVFTLGT HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCEEECCEEEEHH LQADVQGMQGLTPFVRTGNAPALGAGVLVLLAALARRRRAGAA HHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11823852