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The map label for this gene is 17545142

Identifier: 17545142

GI number: 17545142

Start: 451620

End: 451952

Strand: Direct

Name: 17545142

Synonym: RSc0423

Alternate gene names: NA

Gene position: 451620-451952 (Clockwise)

Preceding gene: 17545141

Following gene: 17545153

Centisome position: 12.15

GC content: 58.56

Gene sequence:

>333_bases
GTGAGCCTGACCAAGGCTTGCGCGCTGTTTCGCATGTCGCGCTCGGTGTACGGGTATCGGTTTGTTGCTCGCGATGCATT
GGCACTGCTTGCACGCATCAAGGCGATTGCGGCCACACGCGTGCATTACGGCTATCGCCGTGTGCACGTGATGCTGCAGC
GGGACGGTTGGAAAGACCATCACAAACGCGTCTATCGTCTGTATCGCGCGGAAGGCTTGTCGCTCCGGCAAAAACGCCCA
AAGCGCAACAAGTCGGCGCAGCTAGCGGTCATGTCAGAAAATATTCGATCCGGCGCCCTCTCGATGAGCGCTGGAGAGCA
ACTGGCGAACTAA

Upstream 100 bases:

>100_bases
CTGAGCCTGGACAAGGCCATGCTGCAGGACGTGCTGTCAAAAAAGCTCTGAAGCCTTCCCGCATGCGCACGCTGATCGAC
GAGCTACCGAACGCCATCGC

Downstream 100 bases:

>100_bases
ACTTTAGGGGACGATGCCTGCCGCCCCGGGGAGAAGCCATGAAACGCGTGATCAAGAGTTTCCTGCTTGCCGTTGCCCTA
CTGACAGTGGTTAGCGGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase; Integrase Catalytic Subunit; ISRSO16-Transposase ORFB Protein; IS3 Family Transposase; Transposase Of; Remnant Of

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MSLTKACALFRMSRSVYGYRFVARDALALLARIKAIAATRVHYGYRRVHVMLQRDGWKDHHKRVYRLYRAEGLSLRQKRP
KRNKSAQLAVMSENIRSGALSMSAGEQLAN

Sequences:

>Translated_110_residues
MSLTKACALFRMSRSVYGYRFVARDALALLARIKAIAATRVHYGYRRVHVMLQRDGWKDHHKRVYRLYRAEGLSLRQKRP
KRNKSAQLAVMSENIRSGALSMSAGEQLAN
>Mature_109_residues
SLTKACALFRMSRSVYGYRFVARDALALLARIKAIAATRVHYGYRRVHVMLQRDGWKDHHKRVYRLYRAEGLSLRQKRPK
RNKSAQLAVMSENIRSGALSMSAGEQLAN

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12652; Mature: 12521

Theoretical pI: Translated: 11.81; Mature: 11.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTKACALFRMSRSVYGYRFVARDALALLARIKAIAATRVHYGYRRVHVMLQRDGWKDH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHH
HKRVYRLYRAEGLSLRQKRPKRNKSAQLAVMSENIRSGALSMSAGEQLAN
HHHHHHHHHHCCCCHHHCCCCCCCCCEEEEECCCHHCCCCCCCCCHHCCC
>Mature Secondary Structure 
SLTKACALFRMSRSVYGYRFVARDALALLARIKAIAATRVHYGYRRVHVMLQRDGWKDH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHH
HKRVYRLYRAEGLSLRQKRPKRNKSAQLAVMSENIRSGALSMSAGEQLAN
HHHHHHHHHHCCCCHHHCCCCCCCCCEEEEECCCHHCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA