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The map label for this gene is ssb

Identifier: 17545141

GI number: 17545141

Start: 450600

End: 451136

Strand: Direct

Name: ssb

Synonym: RSc0422

Alternate gene names: 17545141

Gene position: 450600-451136 (Clockwise)

Preceding gene: 17545140

Following gene: 17545142

Centisome position: 12.12

GC content: 66.29

Gene sequence:

>537_bases
ATGGCGTCCGTCAACAAAGTCATCATCGTCGGCAATCTCGGCGCCGATCCCGAAACGCGTTACATGCCGAGCGGCGACGC
CGTCACCAATATCCGCGTGGCGACCACCGACCGCTACAAGGACAAGGCCAGCGGCGAAATGCGCGAGGCCACCGAGTGGC
ACCGCATCGCCTTCTTCGGCCGCCTGGCCGAAATCGCCGGCGAATACCTGAAGAAGGGTTCGCAGGTCTACGTCGAAGGC
CGCCTCAAGACCCGCCAGTGGGAGAAGGACGGCCAGAAACAGTACAGCACCGAAATCGTCGCCGAGCAGATGCAGATGCT
CGGCAGCCGCCAGGGCATGGGCGGCGAGGGCGGTGGCGGCGGTGGTGGCTACTCGCGCGGCGAATCGTCGGGCGGTGGCG
GTTACGGCGGTGGCCGTGCCCAGGGCGGCGGCGGTATGAGCCGCGGCGAAGGCGGTGGTGGTCAGGGCGGCGGCGCGCGC
CGTCAGCAGGCGCCTTCGAATGGGTTTGAGGATATGGATGACGATATTCCGTTCTAA

Upstream 100 bases:

>100_bases
CCTGGCTTATAATCGCCAGTCCCATGCGGATGCCGGCGCTGCGTCGTCACTAAAGCCGGCCGATACGGCGGCATCACTTA
CTTATCTTCGGAAACTCATC

Downstream 100 bases:

>100_bases
GGGGAATTTAGTCTAATTCTTTAAAGGAAGGCTCCGAAATTCTTGTCTAATCAATGGGTTGGGCAGGGATTTGCGGGGCC
TTCTTTTTTTGACCCTATAC

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MASVNKVIIVGNLGADPETRYMPSGDAVTNIRVATTDRYKDKASGEMREATEWHRIAFFGRLAEIAGEYLKKGSQVYVEG
RLKTRQWEKDGQKQYSTEIVAEQMQMLGSRQGMGGEGGGGGGGYSRGESSGGGGYGGGRAQGGGGMSRGEGGGGQGGGAR
RQQAPSNGFEDMDDDIPF

Sequences:

>Translated_178_residues
MASVNKVIIVGNLGADPETRYMPSGDAVTNIRVATTDRYKDKASGEMREATEWHRIAFFGRLAEIAGEYLKKGSQVYVEG
RLKTRQWEKDGQKQYSTEIVAEQMQMLGSRQGMGGEGGGGGGGYSRGESSGGGGYGGGRAQGGGGMSRGEGGGGQGGGAR
RQQAPSNGFEDMDDDIPF
>Mature_177_residues
ASVNKVIIVGNLGADPETRYMPSGDAVTNIRVATTDRYKDKASGEMREATEWHRIAFFGRLAEIAGEYLKKGSQVYVEGR
LKTRQWEKDGQKQYSTEIVAEQMQMLGSRQGMGGEGGGGGGGYSRGESSGGGGYGGGRAQGGGGMSRGEGGGGQGGGARR
QQAPSNGFEDMDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

Organism=Escherichia coli, GI1790494, Length=189, Percent_Identity=51.8518518518518, Blast_Score=161, Evalue=2e-41,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SSB_RALSO (Q8Y2B4)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_518543.1
- ProteinModelPortal:   Q8Y2B4
- SMR:   Q8Y2B4
- GeneID:   1219226
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc0422
- NMPDR:   fig|267608.1.peg.422
- HOGENOM:   HBG755544
- OMA:   PAGGYSD
- ProtClustDB:   PRK06958
- BioCyc:   RSOL267608:RSC0422-MONOMER
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR10302
- TIGRFAMs:   TIGR00621

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 18698; Mature: 18567

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVNKVIIVGNLGADPETRYMPSGDAVTNIRVATTDRYKDKASGEMREATEWHRIAFFG
CCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
RLAEIAGEYLKKGSQVYVEGRLKTRQWEKDGQKQYSTEIVAEQMQMLGSRQGMGGEGGGG
HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GGGYSRGESSGGGGYGGGRAQGGGGMSRGEGGGGQGGGARRQQAPSNGFEDMDDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASVNKVIIVGNLGADPETRYMPSGDAVTNIRVATTDRYKDKASGEMREATEWHRIAFFG
CCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
RLAEIAGEYLKKGSQVYVEGRLKTRQWEKDGQKQYSTEIVAEQMQMLGSRQGMGGEGGGG
HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GGGYSRGESSGGGGYGGGRAQGGGGMSRGEGGGGQGGGARRQQAPSNGFEDMDDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852