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The map label for this gene is nasF [H]

Identifier: 17545100

GI number: 17545100

Start: 409624

End: 410886

Strand: Reverse

Name: nasF [H]

Synonym: RSc0381

Alternate gene names: 17545100

Gene position: 410886-409624 (Counterclockwise)

Preceding gene: 17545101

Following gene: 17545099

Centisome position: 11.06

GC content: 67.62

Gene sequence:

>1263_bases
ATGGCCGCGCCGAGCAAGACCGACACCCCGATCAACCCCAAGCGCCGGCGTGTGCTGGCAACCGTCGCTGGAGGCAGCGC
AATGGCATTGATAGACCCGCTGGTGCGCGCCGGGGCCTGGGCGGCCGGCTCCGATGCGCCCGAGAAGACCGAGCTGAAGG
TCGGCTTCATCCCGCTCACCGACTGCGCATCGGTGGTGATGGCGGCCACGCTGGGCCTGGACAAGAAGTACGGCATCAAG
ATCGTGCCGTCCAAGGAGGCCTCGTGGGCCGGCGTGCGCGACAAGCTGGTCTCGGGCGACCTGGATGCGGCCCACGTGCT
GTATGGCCTCGTCTACGGCGTGCAGCTCGGCATCGGCGGCCCGAAGAAGGACATGGCCGTGCTGATGACGCTCAACAACA
ACGGCCAGGCGATCACGCTGTCGTCCAAGCTCAAGGAGGCGGGCGTGCGGGACGGCGCTTCGCTCAAGGCCCTGATGACC
AGGGAGAAGCGCGACTACACCTTCGCCCAGACCTTCCCCACCGGCACGCACGCGATGTGGCTGTACTACTGGCTGGCCGC
GCACGGCATCCACCCGCTGCAGGACGCCAAGGCGATCACCGTGCCGCCGCCGCAGATGGTCGCCAACATGCGCGTGGGCA
ACATGGACGGCTACTGCGTGGGCGAGCCGTGGGGCGCGCGCGCCATCGCCGACGGCATCGGCTTCACCGCCGAGACCACG
CAGGCGATCTGGAAAGACCATCCCGAGAAGGTGCTCGGCACCACGGCCGAGTTCGCGCAGAAGTATCCGAACACCGCGCG
CGCGCTGACGGCCGCCGTGCTGGAGGCCTCCAAGTTCATCGATGCCTCGGCCTCGAACCGGCGCAAGACGGCCGAGACGG
TGGCCGCCAAGTCCTACGTCAACACCGACATGGACATCATCCTGGACCGCATGCTCGGCCGCTACACCAACGGCCTGGGC
AAGACCTGGGACGATGCGGACCCGATGCGCTTCTACCACGACGGCGCGGTCAACTTCCCGTACCTGTCGGACGGCATGTG
GTTCCTCACACAGCACAAGCGCTGGGGCCTGCTGAAGACGCACCCCGACTACCTGGCGATCGCCAGGCAGGTCAACCGCG
TCGACATCTACAAGCAGGCCGCGGCCGCCACCGGCACGCCGCTGCCCAAGAGCGACCTGCGCACCGCCAGGCTGATCGAC
GGCGTGGTGTGGGATGCAAAGAACCCCGCCGCCTACGCCGACAGCTTCAAGATCAAGGCCTGA

Upstream 100 bases:

>100_bases
GTATCGGCATGGGACAACGGCGTCCCGGCGCAACCGCAGACGACCCGCCTTCGCGACGGGCGGCGCGGCGTGCCGGGACG
CCTTTTCTTTGGAGCCACGG

Downstream 100 bases:

>100_bases
TCTTCGGATCTTCACATCGATGGAGCCCGACATGAACACGCTTGCCAAAGCCTTGCCCGGCGCGCACGCCAGCGCCGGTT
CCGTACCGCCCAAACCCGCC

Product: nitrate transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MAAPSKTDTPINPKRRRVLATVAGGSAMALIDPLVRAGAWAAGSDAPEKTELKVGFIPLTDCASVVMAATLGLDKKYGIK
IVPSKEASWAGVRDKLVSGDLDAAHVLYGLVYGVQLGIGGPKKDMAVLMTLNNNGQAITLSSKLKEAGVRDGASLKALMT
REKRDYTFAQTFPTGTHAMWLYYWLAAHGIHPLQDAKAITVPPPQMVANMRVGNMDGYCVGEPWGARAIADGIGFTAETT
QAIWKDHPEKVLGTTAEFAQKYPNTARALTAAVLEASKFIDASASNRRKTAETVAAKSYVNTDMDIILDRMLGRYTNGLG
KTWDDADPMRFYHDGAVNFPYLSDGMWFLTQHKRWGLLKTHPDYLAIARQVNRVDIYKQAAAATGTPLPKSDLRTARLID
GVVWDAKNPAAYADSFKIKA

Sequences:

>Translated_420_residues
MAAPSKTDTPINPKRRRVLATVAGGSAMALIDPLVRAGAWAAGSDAPEKTELKVGFIPLTDCASVVMAATLGLDKKYGIK
IVPSKEASWAGVRDKLVSGDLDAAHVLYGLVYGVQLGIGGPKKDMAVLMTLNNNGQAITLSSKLKEAGVRDGASLKALMT
REKRDYTFAQTFPTGTHAMWLYYWLAAHGIHPLQDAKAITVPPPQMVANMRVGNMDGYCVGEPWGARAIADGIGFTAETT
QAIWKDHPEKVLGTTAEFAQKYPNTARALTAAVLEASKFIDASASNRRKTAETVAAKSYVNTDMDIILDRMLGRYTNGLG
KTWDDADPMRFYHDGAVNFPYLSDGMWFLTQHKRWGLLKTHPDYLAIARQVNRVDIYKQAAAATGTPLPKSDLRTARLID
GVVWDAKNPAAYADSFKIKA
>Mature_419_residues
AAPSKTDTPINPKRRRVLATVAGGSAMALIDPLVRAGAWAAGSDAPEKTELKVGFIPLTDCASVVMAATLGLDKKYGIKI
VPSKEASWAGVRDKLVSGDLDAAHVLYGLVYGVQLGIGGPKKDMAVLMTLNNNGQAITLSSKLKEAGVRDGASLKALMTR
EKRDYTFAQTFPTGTHAMWLYYWLAAHGIHPLQDAKAITVPPPQMVANMRVGNMDGYCVGEPWGARAIADGIGFTAETTQ
AIWKDHPEKVLGTTAEFAQKYPNTARALTAAVLEASKFIDASASNRRKTAETVAAKSYVNTDMDIILDRMLGRYTNGLGK
TWDDADPMRFYHDGAVNFPYLSDGMWFLTQHKRWGLLKTHPDYLAIARQVNRVDIYKQAAAATGTPLPKSDLRTARLIDG
VVWDAKNPAAYADSFKIKA

Specific function: Essential component of the nitrate-transporting system. May be the substrate-binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CmpA/NrtA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45517; Mature: 45385

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPSKTDTPINPKRRRVLATVAGGSAMALIDPLVRAGAWAAGSDAPEKTELKVGFIPLT
CCCCCCCCCCCCHHHCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEHH
DCASVVMAATLGLDKKYGIKIVPSKEASWAGVRDKLVSGDLDAAHVLYGLVYGVQLGIGG
HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
PKKDMAVLMTLNNNGQAITLSSKLKEAGVRDGASLKALMTREKRDYTFAQTFPTGTHAMW
CCCCEEEEEEECCCCCEEEEHHHHHHCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHH
LYYWLAAHGIHPLQDAKAITVPPPQMVANMRVGNMDGYCVGEPWGARAIADGIGFTAETT
HHHHHHHCCCCCCCCCCEEECCCHHHHHCCEECCCCCEEECCCCCCHHHHHCCCCCHHHH
QAIWKDHPEKVLGTTAEFAQKYPNTARALTAAVLEASKFIDASASNRRKTAETVAAKSYV
HHHHHCCCHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
NTDMDIILDRMLGRYTNGLGKTWDDADPMRFYHDGAVNFPYLSDGMWFLTQHKRWGLLKT
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCEECCCEEEEEECCCCCCCCC
HPDYLAIARQVNRVDIYKQAAAATGTPLPKSDLRTARLIDGVVWDAKNPAAYADSFKIKA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCEECC
>Mature Secondary Structure 
AAPSKTDTPINPKRRRVLATVAGGSAMALIDPLVRAGAWAAGSDAPEKTELKVGFIPLT
CCCCCCCCCCCHHHCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEHH
DCASVVMAATLGLDKKYGIKIVPSKEASWAGVRDKLVSGDLDAAHVLYGLVYGVQLGIGG
HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
PKKDMAVLMTLNNNGQAITLSSKLKEAGVRDGASLKALMTREKRDYTFAQTFPTGTHAMW
CCCCEEEEEEECCCCCEEEEHHHHHHCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHH
LYYWLAAHGIHPLQDAKAITVPPPQMVANMRVGNMDGYCVGEPWGARAIADGIGFTAETT
HHHHHHHCCCCCCCCCCEEECCCHHHHHCCEECCCCCEEECCCCCCHHHHHCCCCCHHHH
QAIWKDHPEKVLGTTAEFAQKYPNTARALTAAVLEASKFIDASASNRRKTAETVAAKSYV
HHHHHCCCHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
NTDMDIILDRMLGRYTNGLGKTWDDADPMRFYHDGAVNFPYLSDGMWFLTQHKRWGLLKT
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCEECCCEEEEEECCCCCCCCC
HPDYLAIARQVNRVDIYKQAAAATGTPLPKSDLRTARLIDGVVWDAKNPAAYADSFKIKA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]