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The map label for this gene is 17545089

Identifier: 17545089

GI number: 17545089

Start: 397863

End: 398510

Strand: Direct

Name: 17545089

Synonym: RSc0370

Alternate gene names: NA

Gene position: 397863-398510 (Clockwise)

Preceding gene: 17545088

Following gene: 17545090

Centisome position: 10.71

GC content: 68.06

Gene sequence:

>648_bases
ATGGTGAATCAGGAATCCGCGTCCGGCCGGCTTCAGGCGCCCGCCGATCCACGCATCGACGCGCGCACGCGCCGGGGCCG
CATGATGATGCTGCTGTTGCTGCTGGTATGCGCCTCGCCGGTGATCGCGTCGTACCTGGCGTACTACGTGTTCACGCCGG
CCGGCGGCAAGGCGGCGTACGGCATGCTGGTCGAGCCGCAGCGGCCGATGCCGCCCGGCCTGATGGTGAAGGACGAGCAT
GGCGCGGAAGTGCCGTTCGCCAGCCTCAAGGGCAAATGGCTGATGGTGTCGATGGATGGCAGCGCCTGCGATGACACCTG
CGCCCGCAAACTGTTCACCATGCGCCAACTGCGCATCGGCCAGGGCCCGGACCGCGACCGCATCGTCCCGGTCTGGCTCG
TCACCGATCAGGGGCCGATCGACTCGCGCCTGGCCACGGCCTACAACGACGACTACGCGGCCGTGCGTTTCCTGCGGGCC
GCCGACCTGCCCAAGGGCTGGCTGGGCGACGGCAAGACCCCCGCGACCGACCACATCTACCTGGTCGATCCGCTCGGCAA
CCTGATGATGCAGTTCCCGAAGGACCCGGACCCGAAGAAGGTCCGTGGCGACCTCGGCCGGCTGCTCAAGTATTCGCGCA
TCGGATAG

Upstream 100 bases:

>100_bases
GGCGTGCGGCGTTATCGGCGCTTGAGCGGGGCTTCGCCCACCGACTGAACACGAACACGCGTTGCGGCGTAGTGCCGCAG
CTAAAGGTATTGGGAATCAC

Downstream 100 bases:

>100_bases
GCCATGCTGCTGCAACTCGCATCGATCGGCGTCCTGATCGCGCTGATTCCGCTGTGCTACGTGGCGGTCAAGGGCGACCG
CAACAAATACCGCAAGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Sco1/SenC Family Cytochrome Oxidase Assembly Protein

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MVNQESASGRLQAPADPRIDARTRRGRMMMLLLLLVCASPVIASYLAYYVFTPAGGKAAYGMLVEPQRPMPPGLMVKDEH
GAEVPFASLKGKWLMVSMDGSACDDTCARKLFTMRQLRIGQGPDRDRIVPVWLVTDQGPIDSRLATAYNDDYAAVRFLRA
ADLPKGWLGDGKTPATDHIYLVDPLGNLMMQFPKDPDPKKVRGDLGRLLKYSRIG

Sequences:

>Translated_215_residues
MVNQESASGRLQAPADPRIDARTRRGRMMMLLLLLVCASPVIASYLAYYVFTPAGGKAAYGMLVEPQRPMPPGLMVKDEH
GAEVPFASLKGKWLMVSMDGSACDDTCARKLFTMRQLRIGQGPDRDRIVPVWLVTDQGPIDSRLATAYNDDYAAVRFLRA
ADLPKGWLGDGKTPATDHIYLVDPLGNLMMQFPKDPDPKKVRGDLGRLLKYSRIG
>Mature_215_residues
MVNQESASGRLQAPADPRIDARTRRGRMMMLLLLLVCASPVIASYLAYYVFTPAGGKAAYGMLVEPQRPMPPGLMVKDEH
GAEVPFASLKGKWLMVSMDGSACDDTCARKLFTMRQLRIGQGPDRDRIVPVWLVTDQGPIDSRLATAYNDDYAAVRFLRA
ADLPKGWLGDGKTPATDHIYLVDPLGNLMMQFPKDPDPKKVRGDLGRLLKYSRIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23753; Mature: 23753

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNQESASGRLQAPADPRIDARTRRGRMMMLLLLLVCASPVIASYLAYYVFTPAGGKAAY
CCCCCCCCCEEECCCCCCCCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCEEE
GMLVEPQRPMPPGLMVKDEHGAEVPFASLKGKWLMVSMDGSACDDTCARKLFTMRQLRIG
CEEECCCCCCCCCCEEECCCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCC
QGPDRDRIVPVWLVTDQGPIDSRLATAYNDDYAAVRFLRAADLPKGWLGDGKTPATDHIY
CCCCCCCEEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEE
LVDPLGNLMMQFPKDPDPKKVRGDLGRLLKYSRIG
EECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVNQESASGRLQAPADPRIDARTRRGRMMMLLLLLVCASPVIASYLAYYVFTPAGGKAAY
CCCCCCCCCEEECCCCCCCCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCEEE
GMLVEPQRPMPPGLMVKDEHGAEVPFASLKGKWLMVSMDGSACDDTCARKLFTMRQLRIG
CEEECCCCCCCCCCEEECCCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCC
QGPDRDRIVPVWLVTDQGPIDSRLATAYNDDYAAVRFLRAADLPKGWLGDGKTPATDHIY
CCCCCCCEEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEE
LVDPLGNLMMQFPKDPDPKKVRGDLGRLLKYSRIG
EECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA