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The map label for this gene is 17545088

Identifier: 17545088

GI number: 17545088

Start: 397040

End: 397810

Strand: Direct

Name: 17545088

Synonym: RSc0369

Alternate gene names: NA

Gene position: 397040-397810 (Clockwise)

Preceding gene: 17545086

Following gene: 17545089

Centisome position: 10.68

GC content: 69.39

Gene sequence:

>771_bases
ATGACGGCGCGGGCCGGCTTGCGCCGGTGGTTTGCGCCGGTGCCCATGCTGGCCGGCGTGGTGGTGATCGCGTCGACGTG
CACGCTGGGCCGCTGGCAGCTGTCGCGCGCGCACGAGCGCATCGAGCGGCAGGCGCGCATCGAGGCGATGGCGCATGCGA
GCGCGCAGCGCGTGACCGCGCAGCCGGTGGCCGCCGATGCGGTGATGTACCGGCCGGTGGTGCTGCGGGGCACGTTCGAT
GTCGCGCATACGGTGCTGCTGGAGAACCGTCCGCATGCGACGAACGGCGTGTCGCGCCCCGGTTTCGAAGTGCTGATTCC
GCTGATGCCGGAAGGGGTGGGTGGACGCGCCGTGCTGGTCAACCGGGGCTGGCTGCCGCGCGATCCGGTCGAGCGCACCC
GCATCGCCCCGTACACCACACCCGCGGGTGTGGTGCAGGTCGAAGGGATTGCTGTGCCACATGCCAGCCGCGTTTATAGT
TTCGGCCGCAAGGACGGCGCAGATGAAGCCGGCCAGCGACTTAGGCAGAATATCGACCTCGACGCGTTTGCGCGCGAAAT
CGGCGTGCCGCTGCAGCCCTTCGTGGTCGAGCAGCAATCCGGCGCGCAGGACGGCCTGCAGCGCGATTGGCCGCGCGCAG
ACTCGGGTGCCGACCGCAATTACGGCTACGCCTTCCAGTGGTTTTCGATGGCGGCGGCGGTGCTGGCGCTGATGATCGTT
CATGGCGTGCGGCGTTATCGGCGCTTGAGCGGGGCTTCGCCCACCGACTGA

Upstream 100 bases:

>100_bases
GGCTGCCGAGGATCAGCACAAAGGCGATGGCAACGACGATGCGCATGGAGGGTGAAGGCGTGAACGGGTTAGCGCAGCAT
TATCTCACCGGGCGGACGCG

Downstream 100 bases:

>100_bases
ACACGAACACGCGTTGCGGCGTAGTGCCGCAGCTAAAGGTATTGGGAATCACATGGTGAATCAGGAATCCGCGTCCGGCC
GGCTTCAGGCGCCCGCCGAT

Product: transmembrane cytochrome oxidase complex biogenesis factor transmembrane protein

Products: NA

Alternate protein names: Transmembrane Cytochrome Oxidase; Transmembrane Cytochrome Oxidase Complex Protein; Cytochrome C Oxidase Assembly; Transmembrane Cytochrome Oxidase Complex Biogenesis Factor; Surfeit Locus 1-Like Protein; Surfeit Locus 1 Family Protein; SURF1-Like Protein; Cytochrome Oxidase Complex Biogenesis Factor; Cytochrome Oxidase Assembly Protein SurF1

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MTARAGLRRWFAPVPMLAGVVVIASTCTLGRWQLSRAHERIERQARIEAMAHASAQRVTAQPVAADAVMYRPVVLRGTFD
VAHTVLLENRPHATNGVSRPGFEVLIPLMPEGVGGRAVLVNRGWLPRDPVERTRIAPYTTPAGVVQVEGIAVPHASRVYS
FGRKDGADEAGQRLRQNIDLDAFAREIGVPLQPFVVEQQSGAQDGLQRDWPRADSGADRNYGYAFQWFSMAAAVLALMIV
HGVRRYRRLSGASPTD

Sequences:

>Translated_256_residues
MTARAGLRRWFAPVPMLAGVVVIASTCTLGRWQLSRAHERIERQARIEAMAHASAQRVTAQPVAADAVMYRPVVLRGTFD
VAHTVLLENRPHATNGVSRPGFEVLIPLMPEGVGGRAVLVNRGWLPRDPVERTRIAPYTTPAGVVQVEGIAVPHASRVYS
FGRKDGADEAGQRLRQNIDLDAFAREIGVPLQPFVVEQQSGAQDGLQRDWPRADSGADRNYGYAFQWFSMAAAVLALMIV
HGVRRYRRLSGASPTD
>Mature_255_residues
TARAGLRRWFAPVPMLAGVVVIASTCTLGRWQLSRAHERIERQARIEAMAHASAQRVTAQPVAADAVMYRPVVLRGTFDV
AHTVLLENRPHATNGVSRPGFEVLIPLMPEGVGGRAVLVNRGWLPRDPVERTRIAPYTTPAGVVQVEGIAVPHASRVYSF
GRKDGADEAGQRLRQNIDLDAFAREIGVPLQPFVVEQQSGAQDGLQRDWPRADSGADRNYGYAFQWFSMAAAVLALMIVH
GVRRYRRLSGASPTD

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28097; Mature: 27965

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARAGLRRWFAPVPMLAGVVVIASTCTLGRWQLSRAHERIERQARIEAMAHASAQRVTA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QPVAADAVMYRPVVLRGTFDVAHTVLLENRPHATNGVSRPGFEVLIPLMPEGVGGRAVLV
CCHHHHHHHHCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE
NRGWLPRDPVERTRIAPYTTPAGVVQVEGIAVPHASRVYSFGRKDGADEAGQRLRQNIDL
ECCCCCCCCHHHCCCCCCCCCCCEEEECCEECCCHHHHHHCCCCCCHHHHHHHHHHCCCH
DAFAREIGVPLQPFVVEQQSGAQDGLQRDWPRADSGADRNYGYAFQWFSMAAAVLALMIV
HHHHHHHCCCCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
HGVRRYRRLSGASPTD
HHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TARAGLRRWFAPVPMLAGVVVIASTCTLGRWQLSRAHERIERQARIEAMAHASAQRVTA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QPVAADAVMYRPVVLRGTFDVAHTVLLENRPHATNGVSRPGFEVLIPLMPEGVGGRAVLV
CCHHHHHHHHCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE
NRGWLPRDPVERTRIAPYTTPAGVVQVEGIAVPHASRVYSFGRKDGADEAGQRLRQNIDL
ECCCCCCCCHHHCCCCCCCCCCCEEEECCEECCCHHHHHHCCCCCCHHHHHHHHHHCCCH
DAFAREIGVPLQPFVVEQQSGAQDGLQRDWPRADSGADRNYGYAFQWFSMAAAVLALMIV
HHHHHHHCCCCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
HGVRRYRRLSGASPTD
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA