| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545058
Identifier: 17545058
GI number: 17545058
Start: 371825
End: 372340
Strand: Reverse
Name: 17545058
Synonym: RSc0339
Alternate gene names: NA
Gene position: 372340-371825 (Counterclockwise)
Preceding gene: 17545059
Following gene: 17545057
Centisome position: 10.02
GC content: 67.05
Gene sequence:
>516_bases ATGCGACATCGCCTCTACTTTCTGCTGCCGGACGTGGCGAGCGCCCGGCGCGTCATGAATGACCTTCTGCTGGCGCGCAT CACCGAGCGCCATATCCACTTCGTCGCGCGCGAGGGCGCCGACCTCACCGGCCTGCACGAGGCCAACCTGCTGCAGACCT CCGACATCGTCCATGCCACGCAGAACGGCCTGGTGATCGGCGGCGGCGCAGGCATCATCGCCGGGGTGGTGGCGGCACTG TTCCCGGTGATCGGCGAAGGGCCCCAGTGGGGCATGATTGGCATCACGACCGTGCTGGGCGCGCTGTTCGGCGCGTGGGC ATCGAGCATGATCGGCAGCTCGGTCCCGAACAGCCGACTCAAACCGTTCAAGAAAGCGGTGGAGGAAGAGGGGCAGCTCC TGCTGATGGTCGATGTGCCGCGCTCGCGCGTGAGCGAGCTCCGCGCGCTGCTGCAGAAGACGCATCCGGAAGGGCATTTC AGCGGCGAAGAAGGCGCCATGCCGGCCTTCCCCTGA
Upstream 100 bases:
>100_bases CGCGCAGGTACGGACAACGCAGCCGGGCGGGTTTTGCCAGCGGCTCTCTGGCGGCTCGCTGCCTGACGTAGGCCGCGAGC GATGCCATGGGAGAACGATC
Downstream 100 bases:
>100_bases GCCGGCCTGTTGACTGGAACAGCCGGGGCCTGCGCCCCGGCTTTTTTGTTGTCCGGCGCCGCGCACTCAATCGTCAAATT TGAATACGTGATGCCGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MRHRLYFLLPDVASARRVMNDLLLARITERHIHFVAREGADLTGLHEANLLQTSDIVHATQNGLVIGGGAGIIAGVVAAL FPVIGEGPQWGMIGITTVLGALFGAWASSMIGSSVPNSRLKPFKKAVEEEGQLLLMVDVPRSRVSELRALLQKTHPEGHF SGEEGAMPAFP
Sequences:
>Translated_171_residues MRHRLYFLLPDVASARRVMNDLLLARITERHIHFVAREGADLTGLHEANLLQTSDIVHATQNGLVIGGGAGIIAGVVAAL FPVIGEGPQWGMIGITTVLGALFGAWASSMIGSSVPNSRLKPFKKAVEEEGQLLLMVDVPRSRVSELRALLQKTHPEGHF SGEEGAMPAFP >Mature_171_residues MRHRLYFLLPDVASARRVMNDLLLARITERHIHFVAREGADLTGLHEANLLQTSDIVHATQNGLVIGGGAGIIAGVVAAL FPVIGEGPQWGMIGITTVLGALFGAWASSMIGSSVPNSRLKPFKKAVEEEGQLLLMVDVPRSRVSELRALLQKTHPEGHF SGEEGAMPAFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18367; Mature: 18367
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHRLYFLLPDVASARRVMNDLLLARITERHIHFVAREGADLTGLHEANLLQTSDIVHAT CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC QNGLVIGGGAGIIAGVVAALFPVIGEGPQWGMIGITTVLGALFGAWASSMIGSSVPNSRL CCCEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH KPFKKAVEEEGQLLLMVDVPRSRVSELRALLQKTHPEGHFSGEEGAMPAFP HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRHRLYFLLPDVASARRVMNDLLLARITERHIHFVAREGADLTGLHEANLLQTSDIVHAT CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC QNGLVIGGGAGIIAGVVAALFPVIGEGPQWGMIGITTVLGALFGAWASSMIGSSVPNSRL CCCEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH KPFKKAVEEEGQLLLMVDVPRSRVSELRALLQKTHPEGHFSGEEGAMPAFP HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA