Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is yqiC [C]

Identifier: 17545059

GI number: 17545059

Start: 372620

End: 372883

Strand: Reverse

Name: yqiC [C]

Synonym: RSc0340

Alternate gene names: 17545059

Gene position: 372883-372620 (Counterclockwise)

Preceding gene: 17545070

Following gene: 17545058

Centisome position: 10.03

GC content: 64.39

Gene sequence:

>264_bases
ATGAAACCCACCGATCTCTTTACCGACTTCCAGAACCGCGTGTCCGAGGCGCTGCGCAATTCGCCGGCCGCCGACATCGA
GAAGAACGTCCGCGCGATGATGGCCCAGGGCTTTTCGAAGCTCGACCTGGTCACCCGTGAGGAATTCGACGTCCAGTCCC
AGGTGCTGGCCCGTACGCGCGCCCGGCTGGAAGAGCTGGAAACCCGCGTGGCCCAGCTCGAAGCGCAGTTGAAGACGAGC
GAACCGGCTGCCACCGACCGCTGA

Upstream 100 bases:

>100_bases
GCAACCGCAGGCGCGGCGCGCACCATGGCATGGCAATTCCATCGCACAATTTAGGTGCATGCACCGGTTTGGCGCGGAAA
GCCGACCCTCGGAGACTCTC

Downstream 100 bases:

>100_bases
CCGTGGCCGCCCGCCGAGTTGCCGCACGCCGTGCCGGCCACCGCACCCGTGCTGCGGCGCACAGCGAAAACCGCCTTGTT
CGGCTGGCGGAACTGATCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKPTDLFTDFQNRVSEALRNSPAADIEKNVRAMMAQGFSKLDLVTREEFDVQSQVLARTRARLEELETRVAQLEAQLKTS
EPAATDR

Sequences:

>Translated_87_residues
MKPTDLFTDFQNRVSEALRNSPAADIEKNVRAMMAQGFSKLDLVTREEFDVQSQVLARTRARLEELETRVAQLEAQLKTS
EPAATDR
>Mature_87_residues
MKPTDLFTDFQNRVSEALRNSPAADIEKNVRAMMAQGFSKLDLVTREEFDVQSQVLARTRARLEELETRVAQLEAQLKTS
EPAATDR

Specific function: Unknown

COG id: COG2960

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9882; Mature: 9882

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTDLFTDFQNRVSEALRNSPAADIEKNVRAMMAQGFSKLDLVTREEFDVQSQVLARTR
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
ARLEELETRVAQLEAQLKTSEPAATDR
HHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKPTDLFTDFQNRVSEALRNSPAADIEKNVRAMMAQGFSKLDLVTREEFDVQSQVLARTR
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
ARLEELETRVAQLEAQLKTSEPAATDR
HHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA