| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is yqiC [C]
Identifier: 17545059
GI number: 17545059
Start: 372620
End: 372883
Strand: Reverse
Name: yqiC [C]
Synonym: RSc0340
Alternate gene names: 17545059
Gene position: 372883-372620 (Counterclockwise)
Preceding gene: 17545070
Following gene: 17545058
Centisome position: 10.03
GC content: 64.39
Gene sequence:
>264_bases ATGAAACCCACCGATCTCTTTACCGACTTCCAGAACCGCGTGTCCGAGGCGCTGCGCAATTCGCCGGCCGCCGACATCGA GAAGAACGTCCGCGCGATGATGGCCCAGGGCTTTTCGAAGCTCGACCTGGTCACCCGTGAGGAATTCGACGTCCAGTCCC AGGTGCTGGCCCGTACGCGCGCCCGGCTGGAAGAGCTGGAAACCCGCGTGGCCCAGCTCGAAGCGCAGTTGAAGACGAGC GAACCGGCTGCCACCGACCGCTGA
Upstream 100 bases:
>100_bases GCAACCGCAGGCGCGGCGCGCACCATGGCATGGCAATTCCATCGCACAATTTAGGTGCATGCACCGGTTTGGCGCGGAAA GCCGACCCTCGGAGACTCTC
Downstream 100 bases:
>100_bases CCGTGGCCGCCCGCCGAGTTGCCGCACGCCGTGCCGGCCACCGCACCCGTGCTGCGGCGCACAGCGAAAACCGCCTTGTT CGGCTGGCGGAACTGATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MKPTDLFTDFQNRVSEALRNSPAADIEKNVRAMMAQGFSKLDLVTREEFDVQSQVLARTRARLEELETRVAQLEAQLKTS EPAATDR
Sequences:
>Translated_87_residues MKPTDLFTDFQNRVSEALRNSPAADIEKNVRAMMAQGFSKLDLVTREEFDVQSQVLARTRARLEELETRVAQLEAQLKTS EPAATDR >Mature_87_residues MKPTDLFTDFQNRVSEALRNSPAADIEKNVRAMMAQGFSKLDLVTREEFDVQSQVLARTRARLEELETRVAQLEAQLKTS EPAATDR
Specific function: Unknown
COG id: COG2960
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9882; Mature: 9882
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTDLFTDFQNRVSEALRNSPAADIEKNVRAMMAQGFSKLDLVTREEFDVQSQVLARTR CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ARLEELETRVAQLEAQLKTSEPAATDR HHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKPTDLFTDFQNRVSEALRNSPAADIEKNVRAMMAQGFSKLDLVTREEFDVQSQVLARTR CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ARLEELETRVAQLEAQLKTSEPAATDR HHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA