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The map label for this gene is ybeD [C]

Identifier: 17545045

GI number: 17545045

Start: 358145

End: 358438

Strand: Reverse

Name: ybeD [C]

Synonym: RSc0326

Alternate gene names: 17545045

Gene position: 358438-358145 (Counterclockwise)

Preceding gene: 17545046

Following gene: 17545043

Centisome position: 9.64

GC content: 65.65

Gene sequence:

>294_bases
ATGACCGACGCCAACGACACCCCCGCCACCCCGCCGCGCGAATCGCTGATCGAGTATCCGAGCGACTTCCCCATCAAGGT
GATGGGCAAGATGCAGGACGACTTTGCCGAGACCATCGTGCAGCTGGTGCAGCAGTTCGATCCGGAGTTCCACACCGGCC
GCATGGAGATGCGCCCATCGTCCGGAGGCAACTACCTCGGCCTGACCGTGATCGTGCGCGCCACCAGCCGCGAGCAGCTC
GACGCGCTGTACCGCGCGCTGACCGCGCACCCGATGGTCAAGGTCGTGCTGTAG

Upstream 100 bases:

>100_bases
GTGGCGCTGGAAGCCGTGCCCGAAGCCGGATTCATCGGCCGCACCATCGATTCGATCAAGCTGTGGTTCAAGAAGAAGTA
AGCCCCCCGCGACAGACCCC

Downstream 100 bases:

>100_bases
CCGCTCGCCGGCAAGGCACCCGGCCAACGCAAACGCCCCGGCATGACCGGGGCGTTTTTTTATCGCGAGCCGCGGCGGCT
TATCCCTTCGCGACGTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MTDANDTPATPPRESLIEYPSDFPIKVMGKMQDDFAETIVQLVQQFDPEFHTGRMEMRPSSGGNYLGLTVIVRATSREQL
DALYRALTAHPMVKVVL

Sequences:

>Translated_97_residues
MTDANDTPATPPRESLIEYPSDFPIKVMGKMQDDFAETIVQLVQQFDPEFHTGRMEMRPSSGGNYLGLTVIVRATSREQL
DALYRALTAHPMVKVVL
>Mature_96_residues
TDANDTPATPPRESLIEYPSDFPIKVMGKMQDDFAETIVQLVQQFDPEFHTGRMEMRPSSGGNYLGLTVIVRATSREQLD
ALYRALTAHPMVKVVL

Specific function: Unknown

COG id: COG2921

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0250 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y326_RALSO (Q8Y2K9)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_518447.1
- ProteinModelPortal:   Q8Y2K9
- SMR:   Q8Y2K9
- GeneID:   1219129
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc0326
- NMPDR:   fig|267608.1.peg.326
- HOGENOM:   HBG297220
- OMA:   TATHIEQ
- ProtClustDB:   PRK02047
- BioCyc:   RSOL267608:RSC0326-MONOMER
- HAMAP:   MF_00659
- InterPro:   IPR007454

Pfam domain/function: PF04359 DUF493

EC number: NA

Molecular weight: Translated: 10884; Mature: 10752

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDANDTPATPPRESLIEYPSDFPIKVMGKMQDDFAETIVQLVQQFDPEFHTGRMEMRPS
CCCCCCCCCCCCHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCC
SGGNYLGLTVIVRATSREQLDALYRALTAHPMVKVVL
CCCCEEEEEEEEECCCHHHHHHHHHHHHHCCEEEEEC
>Mature Secondary Structure 
TDANDTPATPPRESLIEYPSDFPIKVMGKMQDDFAETIVQLVQQFDPEFHTGRMEMRPS
CCCCCCCCCCCHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCC
SGGNYLGLTVIVRATSREQLDALYRALTAHPMVKVVL
CCCCEEEEEEEEECCCHHHHHHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852