| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is aut [H]
Identifier: 17545028
GI number: 17545028
Start: 340940
End: 341440
Strand: Direct
Name: aut [H]
Synonym: RSc0309
Alternate gene names: 17545028
Gene position: 340940-341440 (Clockwise)
Preceding gene: 17545027
Following gene: 17545032
Centisome position: 9.17
GC content: 69.46
Gene sequence:
>501_bases ATGTCCACTCTCCGCCAGCCCGCGCCCATGTTCGAACAGAAGCTCTGCGACTCCGCCGACGTGGAGGCCCGCGTGCGCGC CTTGCCGCGCCCGCTGGTCTTCACCAACGGCGTGTTCGACATCCTGCATCGCGGGCACGTGACCTATCTTGCGCAGGCGC GCGCGCTGGGGGCCTCGCTGGTGGTGGGCGTGAACACCGACGCCTCGGTGCGCATGCTGGGCAAGGGCGACGATCGTCCG CTCAATGCCGAGGTGGATCGCCTCGCGGTACTGGCCGCGCTGGAGTCGGTGAGCCTGGTGGTGCTGTTCGCCGAACGCAC GCCGGTCGAGCTGATCCGGCGCGTGCGCCCCGACATCTACGTCAAGGGCGGCGACTACGACATCGACACGCTGGAAGAAA CCCGCGTCGTGCGCGGCTGGGGCGGGACGGCCTTGGCGATTCCGTTCGACCACGACCGCTCGACGACGCAGCTGCTCAAG CGCGTGCGCGCGACGTCCTGA
Upstream 100 bases:
>100_bases CCGCGTCCGAGCAGCCGGCCTGACGCCCGGCGCCTGCCACTGAGCGGCCCATCGGTTTCGATGGGCCGTTTTGTTTCCAG CCTCCGTTTTTTCGCCGCCC
Downstream 100 bases:
>100_bases GTTCCGGAGCGCCGGCGCCGCTTCAGTGCGCGGCGGCCAGGGTGGCGGCCTGCGGCGCCGTGCAGGCGCGCAATTCATCG GCGCCCAGGCGCGTCTTGAG
Product: transferase
Products: NA
Alternate protein names: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 7-phosphotransferase; D-beta-D-heptose 1-phosphate adenosyltransferase [H]
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSTLRQPAPMFEQKLCDSADVEARVRALPRPLVFTNGVFDILHRGHVTYLAQARALGASLVVGVNTDASVRMLGKGDDRP LNAEVDRLAVLAALESVSLVVLFAERTPVELIRRVRPDIYVKGGDYDIDTLEETRVVRGWGGTALAIPFDHDRSTTQLLK RVRATS
Sequences:
>Translated_166_residues MSTLRQPAPMFEQKLCDSADVEARVRALPRPLVFTNGVFDILHRGHVTYLAQARALGASLVVGVNTDASVRMLGKGDDRP LNAEVDRLAVLAALESVSLVVLFAERTPVELIRRVRPDIYVKGGDYDIDTLEETRVVRGWGGTALAIPFDHDRSTTQLLK RVRATS >Mature_165_residues STLRQPAPMFEQKLCDSADVEARVRALPRPLVFTNGVFDILHRGHVTYLAQARALGASLVVGVNTDASVRMLGKGDDRPL NAEVDRLAVLAALESVSLVVLFAERTPVELIRRVRPDIYVKGGDYDIDTLEETRVVRGWGGTALAIPFDHDRSTTQLLKR VRATS
Specific function: Catalyzes the ADP transfer to D-glycero-D-manno-heptose 1-phosphate, yielding ADP-D,D-heptose [H]
COG id: COG2870
COG function: function code M; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the cytidylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789432, Length=141, Percent_Identity=48.2269503546099, Blast_Score=126, Evalue=6e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023030 - InterPro: IPR011611 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR011913 - InterPro: IPR011914 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2; PF00294 PfkB [H]
EC number: 2.7.-.- [C]
Molecular weight: Translated: 18279; Mature: 18148
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLRQPAPMFEQKLCDSADVEARVRALPRPLVFTNGVFDILHRGHVTYLAQARALGASL CCCCCCCCHHHHHHCCCCCCHHHHHHHCCCCEEEECHHHHHHHCCCHHHHHHHHHCCCEE VVGVNTDASVRMLGKGDDRPLNAEVDRLAVLAALESVSLVVLFAERTPVELIRRVRPDIY EEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHCCCCEE VKGGDYDIDTLEETRVVRGWGGTALAIPFDHDRSTTQLLKRVRATS EECCCCCCCCHHHCEEEECCCCEEEEEECCCCCCHHHHHHHHHCCC >Mature Secondary Structure STLRQPAPMFEQKLCDSADVEARVRALPRPLVFTNGVFDILHRGHVTYLAQARALGASL CCCCCCCHHHHHHCCCCCCHHHHHHHCCCCEEEECHHHHHHHCCCHHHHHHHHHCCCEE VVGVNTDASVRMLGKGDDRPLNAEVDRLAVLAALESVSLVVLFAERTPVELIRRVRPDIY EEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHCCCCEE VKGGDYDIDTLEETRVVRGWGGTALAIPFDHDRSTTQLLKRVRATS EECCCCCCCCHHHCEEEECCCCEEEEEECCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA