Click here to switch to the map view.

The map label for this gene is 17545027

Identifier: 17545027

GI number: 17545027

Start: 339993

End: 340862

Strand: Direct

Name: 17545027

Synonym: RSc0308

Alternate gene names: NA

Gene position: 339993-340862 (Clockwise)

Preceding gene: 17545025

Following gene: 17545028

Centisome position: 9.15

GC content: 62.41

Gene sequence:

>870_bases
ATGCTCTATCCCGAATTGTTCAAGTCGTTGGAAGCGGTCCGCTGGAATATGGAAAAGGATATTCCGTGGGACCAGTTCGA
CGCATCGCTCCTGACCGATGCGCAGGCGCAGACCATCAAGATGAACGCCATCACCGAGTGGTCCGCCCTGCCGGCCACCG
AGATGTTCCTGCGTGACAATCGCCACGATTCCGATTTCTCGGCGTTCATGAGCGTGTGGTTCTTTGAAGAACAGAAGCAC
TCGCTGGTGCTGATGGAATACCTGCGCCGCTTCCGCCCGGACCTGGTGCCGACGGAAGAAGAGCTGCACAACGTGCGCTT
CGAATTCGACCCGGCCCCGCCGCTGGAAACGCTGATGCTGCACTTCTGCGGCGAGATCCGCCTGAACCACTGGTACCGCC
GTGCTTCCGAGTGGCACACCGAGCCGGTCATCAAGTCGATCTACAAGCATCTGTCGCAGGACGAAGCCCGCCACGGCGGC
GCCTACCTGCGCTATATGAAGAAGTACCTGGGTCAGTTCGGCGACAACGCCCGCAGCGCGTTCGCCAAGATCGGCGTGCT
GATGGCTTCCGCCCGCCGCACCGAGAAGCCGCTGCACCCGACCAACCTGCACGTCAACAAGGCGCTGTTCCCGCAGGACA
CGGTGCAGTCGCGCCTGCCCAACCCGGACTGGCTGGAGCACTGGCTGGACGAGCAGATCAAGTTCGACGCCGGCTGGGAA
AAGAAAGTGATCGAGCGCATCCTGCACAACATGTCGCTGCTGTTCGAGCGCACCTTCGAGACCGTGCAGGACCTGAACCG
CTACCGCAAGGACCTCAACGCGCGCCTGGTCGGCCAGTCCGGCACGCCCGCGTCCGAGCAGCCGGCCTGA

Upstream 100 bases:

>100_bases
AGAGGAAACGGGCGGATGCGTTTCACGCCTCCGCAGACATGAAAAAGCGGGGACAGTCACCTTGTCTGCTAGAATCCGCC
TGCAAATTCAAAGGCTTACC

Downstream 100 bases:

>100_bases
CGCCCGGCGCCTGCCACTGAGCGGCCCATCGGTTTCGATGGGCCGTTTTGTTTCCAGCCTCCGTTTTTTCGCCGCCCATG
TCCACTCTCCGCCAGCCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: ATPase Component Of ABC Transporter

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MLYPELFKSLEAVRWNMEKDIPWDQFDASLLTDAQAQTIKMNAITEWSALPATEMFLRDNRHDSDFSAFMSVWFFEEQKH
SLVLMEYLRRFRPDLVPTEEELHNVRFEFDPAPPLETLMLHFCGEIRLNHWYRRASEWHTEPVIKSIYKHLSQDEARHGG
AYLRYMKKYLGQFGDNARSAFAKIGVLMASARRTEKPLHPTNLHVNKALFPQDTVQSRLPNPDWLEHWLDEQIKFDAGWE
KKVIERILHNMSLLFERTFETVQDLNRYRKDLNARLVGQSGTPASEQPA

Sequences:

>Translated_289_residues
MLYPELFKSLEAVRWNMEKDIPWDQFDASLLTDAQAQTIKMNAITEWSALPATEMFLRDNRHDSDFSAFMSVWFFEEQKH
SLVLMEYLRRFRPDLVPTEEELHNVRFEFDPAPPLETLMLHFCGEIRLNHWYRRASEWHTEPVIKSIYKHLSQDEARHGG
AYLRYMKKYLGQFGDNARSAFAKIGVLMASARRTEKPLHPTNLHVNKALFPQDTVQSRLPNPDWLEHWLDEQIKFDAGWE
KKVIERILHNMSLLFERTFETVQDLNRYRKDLNARLVGQSGTPASEQPA
>Mature_289_residues
MLYPELFKSLEAVRWNMEKDIPWDQFDASLLTDAQAQTIKMNAITEWSALPATEMFLRDNRHDSDFSAFMSVWFFEEQKH
SLVLMEYLRRFRPDLVPTEEELHNVRFEFDPAPPLETLMLHFCGEIRLNHWYRRASEWHTEPVIKSIYKHLSQDEARHGG
AYLRYMKKYLGQFGDNARSAFAKIGVLMASARRTEKPLHPTNLHVNKALFPQDTVQSRLPNPDWLEHWLDEQIKFDAGWE
KKVIERILHNMSLLFERTFETVQDLNRYRKDLNARLVGQSGTPASEQPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34137; Mature: 34137

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYPELFKSLEAVRWNMEKDIPWDQFDASLLTDAQAQTIKMNAITEWSALPATEMFLRDN
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHEEEEHHHHHHHCCCHHHHHHHCC
RHDSDFSAFMSVWFFEEQKHSLVLMEYLRRFRPDLVPTEEELHNVRFEFDPAPPLETLML
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEECCCCCCHHHHHH
HFCGEIRLNHWYRRASEWHTEPVIKSIYKHLSQDEARHGGAYLRYMKKYLGQFGDNARSA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
FAKIGVLMASARRTEKPLHPTNLHVNKALFPQDTVQSRLPNPDWLEHWLDEQIKFDAGWE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHH
KKVIERILHNMSLLFERTFETVQDLNRYRKDLNARLVGQSGTPASEQPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MLYPELFKSLEAVRWNMEKDIPWDQFDASLLTDAQAQTIKMNAITEWSALPATEMFLRDN
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHEEEEHHHHHHHCCCHHHHHHHCC
RHDSDFSAFMSVWFFEEQKHSLVLMEYLRRFRPDLVPTEEELHNVRFEFDPAPPLETLML
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEECCCCCCHHHHHH
HFCGEIRLNHWYRRASEWHTEPVIKSIYKHLSQDEARHGGAYLRYMKKYLGQFGDNARSA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
FAKIGVLMASARRTEKPLHPTNLHVNKALFPQDTVQSRLPNPDWLEHWLDEQIKFDAGWE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHH
KKVIERILHNMSLLFERTFETVQDLNRYRKDLNARLVGQSGTPASEQPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA