| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545005
Identifier: 17545005
GI number: 17545005
Start: 318346
End: 319062
Strand: Reverse
Name: 17545005
Synonym: RSc0286
Alternate gene names: NA
Gene position: 319062-318346 (Counterclockwise)
Preceding gene: 17545006
Following gene: 17545004
Centisome position: 8.59
GC content: 71.41
Gene sequence:
>717_bases ATGGCACGCAATACGCAATCTTCCCGTGCCCGCTCGCAGCGGGGCGGCACGTTCCTGGGCCTGGTGCTCGGCCTGATCGT CGGGCTGGCGATCGCCGTGGTGGTGGCGGTATACATCACCAAGGCGCCGGTGCCGTTCGTCTCGCGCAACGGTGCGCAAC CCAAGCCGAGCGAGCCGGGCAGCGTGGTCAACCCGCTGCCGGCCCCGGTCCAGCCGGCCCCGCAGGCGAGCGCCCCGCCG GCCGACCCGAACGCTCCGCTGTGGAGCCGCGTGCCGGCCAAGCCGGTCGACCAGGTGCCCGAGCCGAACCAGCCGGGCAC CCAGCCGGGCACCCAGCCGGCCTCCCAGGCCACGCCCAAGCCGGCCGAGCCGGGCAGCAGCGTCGCGATGCAGCGCCCGC CCAAACCGGTCACCCCCGCGCCGGCCGAGAAGCCGGTGGCCGACCCGATCGCCGAGATTGCCCGCCAGGATGCGGCCAAG ACCGGCTACTTCCTGCAAGTGGGCGCTTACGATTCCGCCGAATACGCCGAGCGCCAGAAAGGCAACCTCGCCATGCAGGG CTTCGAGGCCAAGGTCACGCAGCGCGAGGTGAACGGCAGCACCAAATACCGCGTCCGCCTGGGGCCGTTCAATTCGCTGG ACGAGATGACAGCCGTGCGCTCGCGCCTGCAGGCCAGCGGTGTCGAATCCACGGTGATCCGCTTCGCACGGCAATGA
Upstream 100 bases:
>100_bases CTGGCGGTGATCGGTGTCTCGGCACCGCAAAAGATGTGAGGCGCACGACTGCCCGCCACACGGCGCTCTTATAATCGTCG GCGCATCTAGAAGGATCGAC
Downstream 100 bases:
>100_bases CGTCAAAAATGGCATGGCGCCGCCTGAACCCGATGCGGCGGCGCCGGTCAGAAGCCTGAGGATCGGGTCACCGATCGCCT TTGCTCCATTTCCATTCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Sporulation Domain Protein; Sporulation ; Sporulation Related Protein; Protein FtsN; Repeat Protein
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MARNTQSSRARSQRGGTFLGLVLGLIVGLAIAVVVAVYITKAPVPFVSRNGAQPKPSEPGSVVNPLPAPVQPAPQASAPP ADPNAPLWSRVPAKPVDQVPEPNQPGTQPGTQPASQATPKPAEPGSSVAMQRPPKPVTPAPAEKPVADPIAEIARQDAAK TGYFLQVGAYDSAEYAERQKGNLAMQGFEAKVTQREVNGSTKYRVRLGPFNSLDEMTAVRSRLQASGVESTVIRFARQ
Sequences:
>Translated_238_residues MARNTQSSRARSQRGGTFLGLVLGLIVGLAIAVVVAVYITKAPVPFVSRNGAQPKPSEPGSVVNPLPAPVQPAPQASAPP ADPNAPLWSRVPAKPVDQVPEPNQPGTQPGTQPASQATPKPAEPGSSVAMQRPPKPVTPAPAEKPVADPIAEIARQDAAK TGYFLQVGAYDSAEYAERQKGNLAMQGFEAKVTQREVNGSTKYRVRLGPFNSLDEMTAVRSRLQASGVESTVIRFARQ >Mature_237_residues ARNTQSSRARSQRGGTFLGLVLGLIVGLAIAVVVAVYITKAPVPFVSRNGAQPKPSEPGSVVNPLPAPVQPAPQASAPPA DPNAPLWSRVPAKPVDQVPEPNQPGTQPGTQPASQATPKPAEPGSSVAMQRPPKPVTPAPAEKPVADPIAEIARQDAAKT GYFLQVGAYDSAEYAERQKGNLAMQGFEAKVTQREVNGSTKYRVRLGPFNSLDEMTAVRSRLQASGVESTVIRFARQ
Specific function: Unknown
COG id: COG3087
COG function: function code D; Cell division protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25072; Mature: 24941
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARNTQSSRARSQRGGTFLGLVLGLIVGLAIAVVVAVYITKAPVPFVSRNGAQPKPSEPG CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCC SVVNPLPAPVQPAPQASAPPADPNAPLWSRVPAKPVDQVPEPNQPGTQPGTQPASQATPK CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC PAEPGSSVAMQRPPKPVTPAPAEKPVADPIAEIARQDAAKTGYFLQVGAYDSAEYAERQK CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHC GNLAMQGFEAKVTQREVNGSTKYRVRLGPFNSLDEMTAVRSRLQASGVESTVIRFARQ CCEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure ARNTQSSRARSQRGGTFLGLVLGLIVGLAIAVVVAVYITKAPVPFVSRNGAQPKPSEPG CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCC SVVNPLPAPVQPAPQASAPPADPNAPLWSRVPAKPVDQVPEPNQPGTQPGTQPASQATPK CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC PAEPGSSVAMQRPPKPVTPAPAEKPVADPIAEIARQDAAKTGYFLQVGAYDSAEYAERQK CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHC GNLAMQGFEAKVTQREVNGSTKYRVRLGPFNSLDEMTAVRSRLQASGVESTVIRFARQ CCEEECCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA