| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17544987
Identifier: 17544987
GI number: 17544987
Start: 301149
End: 302075
Strand: Reverse
Name: 17544987
Synonym: RSc0268
Alternate gene names: NA
Gene position: 302075-301149 (Counterclockwise)
Preceding gene: 17544988
Following gene: 17544986
Centisome position: 8.13
GC content: 70.98
Gene sequence:
>927_bases ATGGAGAGCGACGTGAACCACGCACATCGGCCGGGATGGCGCCGCGCATGGGCCGTGCTCGGCTGCGCCCTGCTGCTCGC CACGGCCGCGCGCGCCGACGACCCGCCGCCGGCCGGCATGACCGAGCAGGTGGTGGAGGTGCCCAAGCCGGCCGGCATCT TCACCATCCGGCTGGAGACCACCATCTTCAAGCCGGCCGGCGACGGCCCCTTTCCGCTGATCGTGCTCAACCACGGCAAG GCGCACGGCAAGCCGGCCTTCCAGGACCGTGCCCGCTACCTCGCGCAGGCCGCCGCGCTGGTGGCGCGCGGCTACGTGGT GGCGCTGCCGATGCGCCAGGGGTTCGCCAGATCGGGCGGCGCCTACATCGGCGGCGGCTGCAACGTGGAGTCCAACGGCA TCGTGCAGGCCGAGGACGTGGTGGCCGCGCTCGACTACCTGACGCAGCAGCCCTACGTGGACCGCAGCCGCATCGTTGTC ATGGGCCAGTCGCACGGCGGGCTGACGACGATGGCGTTCGGCACGCTCGCCTACCCCGGCGTGCGCGGCCTGGTCAATTT CGCGGGCGGCCTGCGCAACGACACCTGCGTCGCCTGGGAAGACAACCTGGTGCACGCCTTCGGCAACTACGGCAAGCAGT CGCGCTATCCGTCGCTGTGGTTCTACGGCGACAACGACAGCTACTGGCCCAGGCCGCTGCCGGAGAAACTGTTCGCCGCC TACACGGGCGCGGGCGGCAAGGCCCGCTTGGTCGACTTCGGCACCTTCCAGGGCGATTCGCACGGCATGTTCGGCAGCCG TGCCGGCTTGCCCATCTGGCTGCCGGAGGTCGACGCCTTCCTGCGCGAGCTTGGCCTGCCCAGCGGCCCCGTCCCCGCCT CCACACCGGCCAGCGCATCGGCCGATGCCAACCAGGACACGCAATGA
Upstream 100 bases:
>100_bases GCAGCGTGCTGGGCCTGGGGCTGTCGGCCAGCCTGAACGCGCCGATCGGCGAGATGAATTTCGGCGTGTTCCGCATGTAG GCGGGCCGCCACGGTACTGA
Downstream 100 bases:
>100_bases ACGCCTTCGAGACCCTCGCCTTCGCACAGCACGGCGCCGTGGCTACGGTCACGCTCAACCGGCCGGACGTGCGCAACGCC TTCAACGAGACCGTCATCGC
Product: signal peptide protein
Products: NA
Alternate protein names: Signal Peptide Protein; Dienelactone Hydrolase And Related S-Like Protein; Dipeptidyl Aminopeptidase/Acylaminoacyl-Peptidase; Dipeptidyl; Dienelactone Hydrolase And Related S Protein; Dienelactone Hydrolase-Like; Subfamily S9C Unassigned Peptidase; Dienelactone Hydrolase-Like Protein; Acylamino-Acid-Releasing; Lipoprotein
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MESDVNHAHRPGWRRAWAVLGCALLLATAARADDPPPAGMTEQVVEVPKPAGIFTIRLETTIFKPAGDGPFPLIVLNHGK AHGKPAFQDRARYLAQAAALVARGYVVALPMRQGFARSGGAYIGGGCNVESNGIVQAEDVVAALDYLTQQPYVDRSRIVV MGQSHGGLTTMAFGTLAYPGVRGLVNFAGGLRNDTCVAWEDNLVHAFGNYGKQSRYPSLWFYGDNDSYWPRPLPEKLFAA YTGAGGKARLVDFGTFQGDSHGMFGSRAGLPIWLPEVDAFLRELGLPSGPVPASTPASASADANQDTQ
Sequences:
>Translated_308_residues MESDVNHAHRPGWRRAWAVLGCALLLATAARADDPPPAGMTEQVVEVPKPAGIFTIRLETTIFKPAGDGPFPLIVLNHGK AHGKPAFQDRARYLAQAAALVARGYVVALPMRQGFARSGGAYIGGGCNVESNGIVQAEDVVAALDYLTQQPYVDRSRIVV MGQSHGGLTTMAFGTLAYPGVRGLVNFAGGLRNDTCVAWEDNLVHAFGNYGKQSRYPSLWFYGDNDSYWPRPLPEKLFAA YTGAGGKARLVDFGTFQGDSHGMFGSRAGLPIWLPEVDAFLRELGLPSGPVPASTPASASADANQDTQ >Mature_308_residues MESDVNHAHRPGWRRAWAVLGCALLLATAARADDPPPAGMTEQVVEVPKPAGIFTIRLETTIFKPAGDGPFPLIVLNHGK AHGKPAFQDRARYLAQAAALVARGYVVALPMRQGFARSGGAYIGGGCNVESNGIVQAEDVVAALDYLTQQPYVDRSRIVV MGQSHGGLTTMAFGTLAYPGVRGLVNFAGGLRNDTCVAWEDNLVHAFGNYGKQSRYPSLWFYGDNDSYWPRPLPEKLFAA YTGAGGKARLVDFGTFQGDSHGMFGSRAGLPIWLPEVDAFLRELGLPSGPVPASTPASASADANQDTQ
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32859; Mature: 32859
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESDVNHAHRPGWRRAWAVLGCALLLATAARADDPPPAGMTEQVVEVPKPAGIFTIRLET CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEEEE TIFKPAGDGPFPLIVLNHGKAHGKPAFQDRARYLAQAAALVARGYVVALPMRQGFARSGG EEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECHHCHHHCCC AYIGGGCNVESNGIVQAEDVVAALDYLTQQPYVDRSRIVVMGQSHGGLTTMAFGTLAYPG CEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEHHHHHHHHCCH VRGLVNFAGGLRNDTCVAWEDNLVHAFGNYGKQSRYPSLWFYGDNDSYWPRPLPEKLFAA HHHHHHHHCCCCCCEEEEECCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHH YTGAGGKARLVDFGTFQGDSHGMFGSRAGLPIWLPEVDAFLRELGLPSGPVPASTPASAS HCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCCCCCCCC ADANQDTQ CCCCCCCC >Mature Secondary Structure MESDVNHAHRPGWRRAWAVLGCALLLATAARADDPPPAGMTEQVVEVPKPAGIFTIRLET CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEEEE TIFKPAGDGPFPLIVLNHGKAHGKPAFQDRARYLAQAAALVARGYVVALPMRQGFARSGG EEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECHHCHHHCCC AYIGGGCNVESNGIVQAEDVVAALDYLTQQPYVDRSRIVVMGQSHGGLTTMAFGTLAYPG CEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEHHHHHHHHCCH VRGLVNFAGGLRNDTCVAWEDNLVHAFGNYGKQSRYPSLWFYGDNDSYWPRPLPEKLFAA HHHHHHHHCCCCCCEEEEECCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHH YTGAGGKARLVDFGTFQGDSHGMFGSRAGLPIWLPEVDAFLRELGLPSGPVPASTPASAS HCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCCCCCCCC ADANQDTQ CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA