Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is ycbL [C]

Identifier: 17544977

GI number: 17544977

Start: 292040

End: 292999

Strand: Reverse

Name: ycbL [C]

Synonym: RSc0258

Alternate gene names: 17544977

Gene position: 292999-292040 (Counterclockwise)

Preceding gene: 17544978

Following gene: 17544974

Centisome position: 7.88

GC content: 72.19

Gene sequence:

>960_bases
ATGACGGCCGGCCACGGCATCGCCGCCCTGCCCGGCACGATGCGCGTGTTCGAGCGCGGCTGGCTGTCGTCCAACAACAT
CCTGTTCTTCGACGACGATGCGCACGGCGGCTGCGCGCTCGTCGATTCCGGCTACCTGACGCACGCGCCGCAGACCGTGG
CGCTGGCGCGGCATGCGCTGCAGGGCCGGCCGCTGCGCCGGCTGCTCAATACGCACCTGCACGCCGACCACTGCGGCGGC
AACGCAGCGCTGCAGGCCGCCTACGGCTGCCGCATCCGCGTGCCCGCCGCGCAGATCGGCGACGTGCGCCGCTGGGACAC
CGACGCGCTCAGCTACCGCCCCACCGGCCAGCAATGCGAGCGCTTCACGCTGCCCGAGGGCGACACCGCCGAAGCCGGCC
TGGCCGACGGCATGACGGCGCGCCTGGGCGGCCTCGACTGGCAGGTGATCAGTGCACCCGGACACGACCCGCACGCCGTC
ATCCTGTACAGCCCCGACACGCGCGTGCTGCTGTCCGCCGATGCGCTGTGGGAGCGCGGCTTCGGCGTGATCTTTCCTGA
GCTGGAGGGCGAGAGCGGCTTTGCCGAACAGGAGGCGATCCTGGCGTGCATCGCGCGGCTCGGTGCGCGCGTGGTGGTGC
CGGGCCATGGCCGGCCGTTCACGGAGGTGGATGCGGCCATCGACGCGGCACGGGGCCGGCTCGCCTACCTGCGCGCCGAT
CCGGAGCGCAACGCCCTGCACGCCCTGCGCGTGCTGGTGAAGTTCAAGCTGCTGGAGCAGCAGGCCATGACGCGCGAGGC
CCTGGCGGCCTGGTTTGCACAGGCCTCACTGATTCCACGCCTGCAGGCGCGCTTCTTTGCCGCGACGCCACTGCCGGCGC
TGCTGGAAGCAACCGTCGCGGCGCTGGTCAAGGCCGGCGCCGCAGCCGTTGAAGCCACGCGGATCGTCAACCGAGGCTGA

Upstream 100 bases:

>100_bases
AGATCGCGGCGTGGTCCGCGCTGCCCGACACCGCGCGTGTCGCCATCTGGCGGCAGTTGCCCGAGCGCGCCCGCGCGTGG
CTCGAAGACACCGCCCGCGC

Downstream 100 bases:

>100_bases
CGCGGCCGCGACCGGCGGCCGCTTCGGCCTGCCGGCCACGGCGGATCGGTCGATGACGATGCCCGACCGGCGTCTTACGG
CCCGGCATGGACGTCGGGCG

Product: beta lactamase

Products: NA

Alternate protein names: Beta-Lactamase Domain-Containing Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase; Hydroxyacylglutathione Hydrolase; Beta Lactamase; Beta Lactamase Protein

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MTAGHGIAALPGTMRVFERGWLSSNNILFFDDDAHGGCALVDSGYLTHAPQTVALARHALQGRPLRRLLNTHLHADHCGG
NAALQAAYGCRIRVPAAQIGDVRRWDTDALSYRPTGQQCERFTLPEGDTAEAGLADGMTARLGGLDWQVISAPGHDPHAV
ILYSPDTRVLLSADALWERGFGVIFPELEGESGFAEQEAILACIARLGARVVVPGHGRPFTEVDAAIDAARGRLAYLRAD
PERNALHALRVLVKFKLLEQQAMTREALAAWFAQASLIPRLQARFFAATPLPALLEATVAALVKAGAAAVEATRIVNRG

Sequences:

>Translated_319_residues
MTAGHGIAALPGTMRVFERGWLSSNNILFFDDDAHGGCALVDSGYLTHAPQTVALARHALQGRPLRRLLNTHLHADHCGG
NAALQAAYGCRIRVPAAQIGDVRRWDTDALSYRPTGQQCERFTLPEGDTAEAGLADGMTARLGGLDWQVISAPGHDPHAV
ILYSPDTRVLLSADALWERGFGVIFPELEGESGFAEQEAILACIARLGARVVVPGHGRPFTEVDAAIDAARGRLAYLRAD
PERNALHALRVLVKFKLLEQQAMTREALAAWFAQASLIPRLQARFFAATPLPALLEATVAALVKAGAAAVEATRIVNRG
>Mature_318_residues
TAGHGIAALPGTMRVFERGWLSSNNILFFDDDAHGGCALVDSGYLTHAPQTVALARHALQGRPLRRLLNTHLHADHCGGN
AALQAAYGCRIRVPAAQIGDVRRWDTDALSYRPTGQQCERFTLPEGDTAEAGLADGMTARLGGLDWQVISAPGHDPHAVI
LYSPDTRVLLSADALWERGFGVIFPELEGESGFAEQEAILACIARLGARVVVPGHGRPFTEVDAAIDAARGRLAYLRADP
ERNALHALRVLVKFKLLEQQAMTREALAAWFAQASLIPRLQARFFAATPLPALLEATVAALVKAGAAAVEATRIVNRG

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34214; Mature: 34083

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS00743 BETA_LACTAMASE_B_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAGHGIAALPGTMRVFERGWLSSNNILFFDDDAHGGCALVDSGYLTHAPQTVALARHAL
CCCCCCCEECCHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHH
QGRPLRRLLNTHLHADHCGGNAALQAAYGCRIRVPAAQIGDVRRWDTDALSYRPTGQQCE
CCCHHHHHHHHCCCCCCCCCCHHEEHCCCCEEECCHHHHCCCCCCCCCCCCCCCCCHHHH
RFTLPEGDTAEAGLADGMTARLGGLDWQVISAPGHDPHAVILYSPDTRVLLSADALWERG
EECCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCEEEEECCCCEEEEEHHHHHHCC
FGVIFPELEGESGFAEQEAILACIARLGARVVVPGHGRPFTEVDAAIDAARGRLAYLRAD
CEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCEEEEEECC
PERNALHALRVLVKFKLLEQQAMTREALAAWFAQASLIPRLQARFFAATPLPALLEATVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ALVKAGAAAVEATRIVNRG
HHHHHCHHHHHHHHHHCCC
>Mature Secondary Structure 
TAGHGIAALPGTMRVFERGWLSSNNILFFDDDAHGGCALVDSGYLTHAPQTVALARHAL
CCCCCCEECCHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHH
QGRPLRRLLNTHLHADHCGGNAALQAAYGCRIRVPAAQIGDVRRWDTDALSYRPTGQQCE
CCCHHHHHHHHCCCCCCCCCCHHEEHCCCCEEECCHHHHCCCCCCCCCCCCCCCCCHHHH
RFTLPEGDTAEAGLADGMTARLGGLDWQVISAPGHDPHAVILYSPDTRVLLSADALWERG
EECCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCEEEEECCCCEEEEEHHHHHHCC
FGVIFPELEGESGFAEQEAILACIARLGARVVVPGHGRPFTEVDAAIDAARGRLAYLRAD
CEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCEEEEEECC
PERNALHALRVLVKFKLLEQQAMTREALAAWFAQASLIPRLQARFFAATPLPALLEATVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ALVKAGAAAVEATRIVNRG
HHHHHCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA