Click here to switch to the map view.

The map label for this gene is 17544978

Identifier: 17544978

GI number: 17544978

Start: 292996

End: 293262

Strand: Reverse

Name: 17544978

Synonym: RSc0259

Alternate gene names: NA

Gene position: 293262-292996 (Counterclockwise)

Preceding gene: 17544979

Following gene: 17544977

Centisome position: 7.89

GC content: 73.03

Gene sequence:

>267_bases
ATGGACGCCTGCACGCGCTCGCAACTGAAGCTGACGCTCGGCAAGCTGCGCAACCGCCGCGCACAGGCCGAGCGCGCGCT
GCCGGTCGCCTCGCCCTGCGTCAACGTGTGCAGGATGGACGGCTCGCGCGGCCTGTGCATCGGCTGCATGCGCACGCTGG
ACGAGATCGCGGCGTGGTCCGCGCTGCCCGACACCGCGCGTGTCGCCATCTGGCGGCAGTTGCCCGAGCGCGCCCGCGCG
TGGCTCGAAGACACCGCCCGCGCATGA

Upstream 100 bases:

>100_bases
CCGCACGCGGTCTTCAACCTGACGCCCGCCGAACTGGCGGCGATGACCGGCGCCCCGGTGGCGGACATCGCCCAGCGGGG
CTGACCGGCCTGCCACGGCC

Downstream 100 bases:

>100_bases
CGGCCGGCCACGGCATCGCCGCCCTGCCCGGCACGATGCGCGTGTTCGAGCGCGGCTGGCTGTCGTCCAACAACATCCTG
TTCTTCGACGACGATGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MDACTRSQLKLTLGKLRNRRAQAERALPVASPCVNVCRMDGSRGLCIGCMRTLDEIAAWSALPDTARVAIWRQLPERARA
WLEDTARA

Sequences:

>Translated_88_residues
MDACTRSQLKLTLGKLRNRRAQAERALPVASPCVNVCRMDGSRGLCIGCMRTLDEIAAWSALPDTARVAIWRQLPERARA
WLEDTARA
>Mature_88_residues
MDACTRSQLKLTLGKLRNRRAQAERALPVASPCVNVCRMDGSRGLCIGCMRTLDEIAAWSALPDTARVAIWRQLPERARA
WLEDTARA

Specific function: Unknown

COG id: COG3313

COG function: function code R; Predicted Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9811; Mature: 9811

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDACTRSQLKLTLGKLRNRRAQAERALPVASPCVNVCRMDGSRGLCIGCMRTLDEIAAWS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ALPDTARVAIWRQLPERARAWLEDTARA
CCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDACTRSQLKLTLGKLRNRRAQAERALPVASPCVNVCRMDGSRGLCIGCMRTLDEIAAWS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ALPDTARVAIWRQLPERARAWLEDTARA
CCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA