Click here to switch to the map view.

The map label for this gene is tISRso7

Identifier: 17544971

GI number: 17544971

Start: 282838

End: 284088

Strand: Direct

Name: tISRso7

Synonym: RSc0252

Alternate gene names: NA

Gene position: 282838-284088 (Clockwise)

Preceding gene: 17544970

Following gene: 17544972

Centisome position: 7.61

GC content: 63.39

Gene sequence:

>1251_bases
ATGCCTCGCAAACTGAAAGCCAAGCCGGTGGACCTGCCGGCGATCCCCGCCGAACTGCTCGAACAATTCGGCAACGGCCC
GATGACGGCCGAAGCCATCAATGCCGCGACACTGGCCCTCAAGAAGGCCCTGATCGAACGGGCGCTGAGCGGCGAGATGA
ATCACCATCTCGGCTACCCGCCTGGCGCCGCCAAACCGGCCACCGTTACCAACCAGCGCAACGGCTCGGGCGCCAAGACG
GTTCTGACCGAGGACGGCCCGATCCGCATCGAGGTACCGCGCGACCGTGACGGCAGCTTCGAACCGCTGCTCATTCCCAA
ACACGAGCGACGCTTCAAGGGCTTTGACGACAAGATCGTCGCCATGTACGCCCGGGGCATGACCGTGCGCGAGATCCAAG
GCTTCCTGCTGGAGCAATATGCAACGGAAGTCTCCCCCGAGTTCATCAGCTCGGTCACCGATGAGGTGATGGCCGAAGTC
ACCGCGTGGCAGGCCCGGCCACTCGATCCCATGTATCCGGTCGTGTTCTTCGACGCGCTGCGGGTCAAGATCCGGGAAGA
CGCCGTGGTGCGCAACAAGGCCGTCTATCTGGCGCTGGGGGTTCTGCCCGACGGCACGCGTGACATTCTGGGCCTGTGGA
TCGAAAACACCGAGGGCGCCAAGTTCTGGATGAAGGTGTTCAACGACCTGAAGACGCGCGGGGTCAATGACATCCTGATC
GCCGTGACGGACGGCCTCAAAGGCATGCCCGAAGCGCTGGCGGCCGTGTTCCCGGCGACCACGCTGCAGACCTGCATCGT
CCACCTGATCCGCAACAGCCTGGATTACGCGAGCTGGAAGGACCGCCGTGAGCTGGCCGCCGCGATCCGGCCGATCTACA
CAGCGGCGAGCGCAGAGGCCGCACAGGCCGAGCTCGATGCGTTTGCCGACGGCCCGTGGGGGCAGAGATACCCGACGGTG
TGCGCCGCCTGGCGCAACGCCTGGGATCGCGTGATTCCGTTCTTTGCGTTCCCACCGGCGGTGCGCAAGGTGATTTACAC
GACGAACGCCATCGAGAACATCAACGCCCAACTACGCAAGATCATCAAGACCCGAGGCCACTTCCCGACCGATGATGCAG
CAACGAAGCTCATCTGGCTTGCACTGCGCAACATCACGGCGGGTTGGAGCCGTGCCGCTCACGATTGGAAGCAGGCCATG
AACCAATTCGCTATCCTCTACGCGGAGCGATTCGTTCGACCGTCCGTATGA

Upstream 100 bases:

>100_bases
GAGGGCGACATCGTGTGTGATGGTTCTGCGTCGAGTCGTCGCGCCTCGGGCCTGTCAGTAATTTCGTGTTCAAGGCATAA
CATGCTCGCAAGGAGACGTT

Downstream 100 bases:

>100_bases
ATCTCAACCCCGCCTTGAACACGGAAATCCTGACACTCCCTAACCCGCCATCCCCCCAACTGTCCGCCCGCTTTCCACAG
ATCTGTCCGCAACTGTCCAT

Product: ISRSO7-transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MPRKLKAKPVDLPAIPAELLEQFGNGPMTAEAINAATLALKKALIERALSGEMNHHLGYPPGAAKPATVTNQRNGSGAKT
VLTEDGPIRIEVPRDRDGSFEPLLIPKHERRFKGFDDKIVAMYARGMTVREIQGFLLEQYATEVSPEFISSVTDEVMAEV
TAWQARPLDPMYPVVFFDALRVKIREDAVVRNKAVYLALGVLPDGTRDILGLWIENTEGAKFWMKVFNDLKTRGVNDILI
AVTDGLKGMPEALAAVFPATTLQTCIVHLIRNSLDYASWKDRRELAAAIRPIYTAASAEAAQAELDAFADGPWGQRYPTV
CAAWRNAWDRVIPFFAFPPAVRKVIYTTNAIENINAQLRKIIKTRGHFPTDDAATKLIWLALRNITAGWSRAAHDWKQAM
NQFAILYAERFVRPSV

Sequences:

>Translated_416_residues
MPRKLKAKPVDLPAIPAELLEQFGNGPMTAEAINAATLALKKALIERALSGEMNHHLGYPPGAAKPATVTNQRNGSGAKT
VLTEDGPIRIEVPRDRDGSFEPLLIPKHERRFKGFDDKIVAMYARGMTVREIQGFLLEQYATEVSPEFISSVTDEVMAEV
TAWQARPLDPMYPVVFFDALRVKIREDAVVRNKAVYLALGVLPDGTRDILGLWIENTEGAKFWMKVFNDLKTRGVNDILI
AVTDGLKGMPEALAAVFPATTLQTCIVHLIRNSLDYASWKDRRELAAAIRPIYTAASAEAAQAELDAFADGPWGQRYPTV
CAAWRNAWDRVIPFFAFPPAVRKVIYTTNAIENINAQLRKIIKTRGHFPTDDAATKLIWLALRNITAGWSRAAHDWKQAM
NQFAILYAERFVRPSV
>Mature_415_residues
PRKLKAKPVDLPAIPAELLEQFGNGPMTAEAINAATLALKKALIERALSGEMNHHLGYPPGAAKPATVTNQRNGSGAKTV
LTEDGPIRIEVPRDRDGSFEPLLIPKHERRFKGFDDKIVAMYARGMTVREIQGFLLEQYATEVSPEFISSVTDEVMAEVT
AWQARPLDPMYPVVFFDALRVKIREDAVVRNKAVYLALGVLPDGTRDILGLWIENTEGAKFWMKVFNDLKTRGVNDILIA
VTDGLKGMPEALAAVFPATTLQTCIVHLIRNSLDYASWKDRRELAAAIRPIYTAASAEAAQAELDAFADGPWGQRYPTVC
AAWRNAWDRVIPFFAFPPAVRKVIYTTNAIENINAQLRKIIKTRGHFPTDDAATKLIWLALRNITAGWSRAAHDWKQAMN
QFAILYAERFVRPSV

Specific function: Required for the transposition of the insertion element [H]

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 46323; Mature: 46192

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS01007 TRANSPOSASE_MUTATOR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKLKAKPVDLPAIPAELLEQFGNGPMTAEAINAATLALKKALIERALSGEMNHHLGYP
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PGAAKPATVTNQRNGSGAKTVLTEDGPIRIEVPRDRDGSFEPLLIPKHERRFKGFDDKIV
CCCCCCCEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCEECCCHHHHCCCCCHHHH
AMYARGMTVREIQGFLLEQYATEVSPEFISSVTDEVMAEVTAWQARPLDPMYPVVFFDAL
HHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
RVKIREDAVVRNKAVYLALGVLPDGTRDILGLWIENTEGAKFWMKVFNDLKTRGVNDILI
HHHHHHHHHHHCCEEEEEEECCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHCCCCEEEE
AVTDGLKGMPEALAAVFPATTLQTCIVHLIRNSLDYASWKDRRELAAAIRPIYTAASAEA
EEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHH
AQAELDAFADGPWGQRYPTVCAAWRNAWDRVIPFFAFPPAVRKVIYTTNAIENINAQLRK
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IIKTRGHFPTDDAATKLIWLALRNITAGWSRAAHDWKQAMNQFAILYAERFVRPSV
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PRKLKAKPVDLPAIPAELLEQFGNGPMTAEAINAATLALKKALIERALSGEMNHHLGYP
CCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PGAAKPATVTNQRNGSGAKTVLTEDGPIRIEVPRDRDGSFEPLLIPKHERRFKGFDDKIV
CCCCCCCEECCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCEECCCHHHHCCCCCHHHH
AMYARGMTVREIQGFLLEQYATEVSPEFISSVTDEVMAEVTAWQARPLDPMYPVVFFDAL
HHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
RVKIREDAVVRNKAVYLALGVLPDGTRDILGLWIENTEGAKFWMKVFNDLKTRGVNDILI
HHHHHHHHHHHCCEEEEEEECCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHCCCCEEEE
AVTDGLKGMPEALAAVFPATTLQTCIVHLIRNSLDYASWKDRRELAAAIRPIYTAASAEA
EEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHH
AQAELDAFADGPWGQRYPTVCAAWRNAWDRVIPFFAFPPAVRKVIYTTNAIENINAQLRK
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IIKTRGHFPTDDAATKLIWLALRNITAGWSRAAHDWKQAMNQFAILYAERFVRPSV
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1849509; 1327271; 11481430; 11481432 [H]