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The map label for this gene is ylbK [H]

Identifier: 17544940

GI number: 17544940

Start: 242939

End: 243850

Strand: Direct

Name: ylbK [H]

Synonym: RSc0221

Alternate gene names: 17544940

Gene position: 242939-243850 (Clockwise)

Preceding gene: 17544938

Following gene: 17544942

Centisome position: 6.54

GC content: 72.04

Gene sequence:

>912_bases
ATGGATCGAGCGGAACGAACGGCCTTCGTCTTTGCCGGCGGCGGTAGCCTGGGCGCCATCGAGGCGGGCATGCTGCGCGA
GCTGGTGGCCCGCGGCGTGATGCCCGACATGGTGGTCGGCGCGTCGGCGGGGGCCATCAATGCGGCGTTCTTTGCCTGCC
ATCCGCATATGGACGGCGCCGCGCGGCTCGAAGCGCTGTGGCGCGGCGTGCGGCGTGCCGAGGTGATGCCATGGTCGTGG
CGCGTGATGCTGGGCATGCTCGGCCGGCGCAGCACGCACCTGGTCGATGCGGGCGGGCTGCAGCGGCTGCTGAACCGGCA
TTTTGCACAGGCGCGGCTGGAAGCGGCGCCGCTGCCGCTGCACGTGGTCGCGACCGATATGCAGACCGGCGCCGAAGTGG
TGCTGTCCACCGGCAGCATTGTGCAGGCCGTGCTGGCCAGCGCGGCGATTCCGGGCGTGTTTCCGCCGGTGCGCGTCGAT
GGCCGCCTGCTGATCGACGGCGGGGTCGCCAACAACACCCCGATCTCGACGGCCATCCGTCTGGGCGCGACGCGCGTGGT
GGTGCTGCCCGCCGGGTTTGCCTGCGCCGACCGGCGCGAACCGCGCAGCGCCATCGAGCATGCGCTCAACGCGCTGTCGC
TGCTGGTGGCGCGGCAGCTGGCGCAGGACCTGGAGCACTGGGCGGGGACGATTCCCATCTCGGTGGTGCCGCCGCTGTGC
CCGCTCGAGGTCTCGCCCTACGACTACACCCGCTGCGGCGAACTGATCGATCGCGCCGCCGCGGCCACCGCCGCATGGCT
GGCAGCCGACGGGCTGGCGGCCTGCAATGTGCCCGGCGCGCTCTATCCCCATCACCACGACGACGGACACGCGGGTTGCA
GCGCCGATCTCCACGCGATGCCGGCGCCGTGA

Upstream 100 bases:

>100_bases
GGCACCGGGGCCGGCGGCGGATTTCTGGCTGTTGTGGGCGGCGGGATGTACTCTAATTCGAGCCAATCCTGCATCGCGCG
TACTGCGGCGCATCATCTCC

Downstream 100 bases:

>100_bases
GCGCGGCACCCGCCGGACGGCCGGGCGAGGCCGGCGCCAGCGCCGCTAGTTCGCCGCCTGGCCGCGCACCTGCTGCCAGT
CCAGGCCGAACCGGGCGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MDRAERTAFVFAGGGSLGAIEAGMLRELVARGVMPDMVVGASAGAINAAFFACHPHMDGAARLEALWRGVRRAEVMPWSW
RVMLGMLGRRSTHLVDAGGLQRLLNRHFAQARLEAAPLPLHVVATDMQTGAEVVLSTGSIVQAVLASAAIPGVFPPVRVD
GRLLIDGGVANNTPISTAIRLGATRVVVLPAGFACADRREPRSAIEHALNALSLLVARQLAQDLEHWAGTIPISVVPPLC
PLEVSPYDYTRCGELIDRAAAATAAWLAADGLAACNVPGALYPHHHDDGHAGCSADLHAMPAP

Sequences:

>Translated_303_residues
MDRAERTAFVFAGGGSLGAIEAGMLRELVARGVMPDMVVGASAGAINAAFFACHPHMDGAARLEALWRGVRRAEVMPWSW
RVMLGMLGRRSTHLVDAGGLQRLLNRHFAQARLEAAPLPLHVVATDMQTGAEVVLSTGSIVQAVLASAAIPGVFPPVRVD
GRLLIDGGVANNTPISTAIRLGATRVVVLPAGFACADRREPRSAIEHALNALSLLVARQLAQDLEHWAGTIPISVVPPLC
PLEVSPYDYTRCGELIDRAAAATAAWLAADGLAACNVPGALYPHHHDDGHAGCSADLHAMPAP
>Mature_303_residues
MDRAERTAFVFAGGGSLGAIEAGMLRELVARGVMPDMVVGASAGAINAAFFACHPHMDGAARLEALWRGVRRAEVMPWSW
RVMLGMLGRRSTHLVDAGGLQRLLNRHFAQARLEAAPLPLHVVATDMQTGAEVVLSTGSIVQAVLASAAIPGVFPPVRVD
GRLLIDGGVANNTPISTAIRLGATRVVVLPAGFACADRREPRSAIEHALNALSLLVARQLAQDLEHWAGTIPISVVPPLC
PLEVSPYDYTRCGELIDRAAAATAAWLAADGLAACNVPGALYPHHHDDGHAGCSADLHAMPAP

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656043, Length=187, Percent_Identity=32.0855614973262, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI260656037, Length=187, Percent_Identity=32.0855614973262, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI260656041, Length=187, Percent_Identity=32.0855614973262, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI116256487, Length=187, Percent_Identity=32.0855614973262, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI260656039, Length=187, Percent_Identity=32.0855614973262, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI148727335, Length=187, Percent_Identity=29.9465240641711, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI148727290, Length=187, Percent_Identity=29.9465240641711, Blast_Score=69, Evalue=7e-12,
Organism=Escherichia coli, GI226510936, Length=197, Percent_Identity=28.4263959390863, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 31801; Mature: 31801

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRAERTAFVFAGGGSLGAIEAGMLRELVARGVMPDMVVGASAGAINAAFFACHPHMDGA
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEEEEECCCCCHH
ARLEALWRGVRRAEVMPWSWRVMLGMLGRRSTHLVDAGGLQRLLNRHFAQARLEAAPLPL
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCE
HVVATDMQTGAEVVLSTGSIVQAVLASAAIPGVFPPVRVDGRLLIDGGVANNTPISTAIR
EEEEECCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCEECCEEEEECCCCCCCCHHHHHH
LGATRVVVLPAGFACADRREPRSAIEHALNALSLLVARQLAQDLEHWAGTIPISVVPPLC
HCCEEEEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
PLEVSPYDYTRCGELIDRAAAATAAWLAADGLAACNVPGALYPHHHDDGHAGCSADLHAM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAP
CCC
>Mature Secondary Structure
MDRAERTAFVFAGGGSLGAIEAGMLRELVARGVMPDMVVGASAGAINAAFFACHPHMDGA
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEEEEECCCCCHH
ARLEALWRGVRRAEVMPWSWRVMLGMLGRRSTHLVDAGGLQRLLNRHFAQARLEAAPLPL
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCE
HVVATDMQTGAEVVLSTGSIVQAVLASAAIPGVFPPVRVDGRLLIDGGVANNTPISTAIR
EEEEECCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCEECCEEEEECCCCCCCCHHHHHH
LGATRVVVLPAGFACADRREPRSAIEHALNALSLLVARQLAQDLEHWAGTIPISVVPPLC
HCCEEEEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
PLEVSPYDYTRCGELIDRAAAATAAWLAADGLAACNVPGALYPHHHDDGHAGCSADLHAM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]