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The map label for this gene is 17544942

Identifier: 17544942

GI number: 17544942

Start: 245770

End: 246153

Strand: Direct

Name: 17544942

Synonym: RSc0223

Alternate gene names: NA

Gene position: 245770-246153 (Clockwise)

Preceding gene: 17544940

Following gene: 17544943

Centisome position: 6.61

GC content: 66.41

Gene sequence:

>384_bases
ATGTGCAGTGGAAAGCAAAAGCGTGCCGCCATCATGGCGCGACGCCGGGACCGGCGTGCGCAGGCCGCCCTGGCTGCCCG
GGCGACGCTGGCCCCGGTACCATCGCGGCCCTGCGGCCGCGAGCCGGTCGACCGGCAGCGGCTGGCGCCTTGCAACAGCT
ACGGCGAGCCCGAGTTCGCGAGGCGCGGCTACTACGTCGATCTTCCTTTCACCTGCCGAGATTGCGCAAGCCAGGAAGTC
TGGACCGCCGCGCAGCAGAAGTGGTGGTATGAAGAAGCCAAGGGCTATGTCGATTCCACCGCGGTGCGCTGCCTGGCTTG
CCGCCGACAGCGCCGCGGCGCACGCATGAACAACAACAAAGACAACTCGATCAAAGCATCATGA

Upstream 100 bases:

>100_bases
CGTTGCACTAGAGGTGGCATCGACAACACAACGCGAGAGGCCGGGCACAAGCCGGCACCACCGGTGATCTCGGGTTGCCT
GAACCAGACGGGGGCACACG

Downstream 100 bases:

>100_bases
GCAATACCAGTTACGACACCCTCCACGTCGACAACGGCGCCGACATCAAGCTGTGGACCCACGGCGTGCCGGTGGAAGAC
GACGCCCGCAAGCAACTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MCSGKQKRAAIMARRRDRRAQAALAARATLAPVPSRPCGREPVDRQRLAPCNSYGEPEFARRGYYVDLPFTCRDCASQEV
WTAAQQKWWYEEAKGYVDSTAVRCLACRRQRRGARMNNNKDNSIKAS

Sequences:

>Translated_127_residues
MCSGKQKRAAIMARRRDRRAQAALAARATLAPVPSRPCGREPVDRQRLAPCNSYGEPEFARRGYYVDLPFTCRDCASQEV
WTAAQQKWWYEEAKGYVDSTAVRCLACRRQRRGARMNNNKDNSIKAS
>Mature_127_residues
MCSGKQKRAAIMARRRDRRAQAALAARATLAPVPSRPCGREPVDRQRLAPCNSYGEPEFARRGYYVDLPFTCRDCASQEV
WTAAQQKWWYEEAKGYVDSTAVRCLACRRQRRGARMNNNKDNSIKAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14473; Mature: 14473

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSGKQKRAAIMARRRDRRAQAALAARATLAPVPSRPCGREPVDRQRLAPCNSYGEPEFA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHHH
RRGYYVDLPFTCRDCASQEVWTAAQQKWWYEEAKGYVDSTAVRCLACRRQRRGARMNNNK
HCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC
DNSIKAS
CCCCCCC
>Mature Secondary Structure
MCSGKQKRAAIMARRRDRRAQAALAARATLAPVPSRPCGREPVDRQRLAPCNSYGEPEFA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHHH
RRGYYVDLPFTCRDCASQEVWTAAQQKWWYEEAKGYVDSTAVRCLACRRQRRGARMNNNK
HCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC
DNSIKAS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA