| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17544902
Identifier: 17544902
GI number: 17544902
Start: 206630
End: 207127
Strand: Reverse
Name: 17544902
Synonym: RSc0183
Alternate gene names: NA
Gene position: 207127-206630 (Counterclockwise)
Preceding gene: 17544909
Following gene: 17544900
Centisome position: 5.57
GC content: 60.44
Gene sequence:
>498_bases ATGAGGGTCAGCGAGATTTGCTCCCGCCGCATCGTCCACATTCCGGCATCTGCAGCACTGCAGATGGCTGCTCGCCTGAT GCGGGACCAATGTCTGCGCGCGTTGTTCGTGACAGAGCACGGCGTGACTGGAATGCGGGTCGTCGGCATTGTCACGGACC GCGACATGGTGGTGCACGGTCTCGCCAACCGTGCCGACTGCGCTCAAACCACCATATCCGAGGTGATGACCCGCGGCGTG CTGACCATTCAGGGTCATGCCGTCATTAGCGAAGCGCTGCGCACCATGCTTGGTCACGGTTTGCACCGCCTGGCGGTGAT CGACGATCAGCAGCAACTCATCGGCATGCTGACCTTGGATGACACCATTCGTGCAATGGGCAGCGAATGGACTTTGCTGG CCGGCATTCTCGGCCGCGACCGATGCGCAGATCAGGGCTCCGAAACGTCACCACACTTGGTGGTTTCGGATGCTCGCCCC ATGTCATTTCATCAGTAG
Upstream 100 bases:
>100_bases CGGTTGCCCCTTTTTCGGATGATCACTTCATCTTGTGCGGGATCAATGTCCAACACCTAGTCGTCCTTATAGTGAAAACG TATCTGCCTCGGAGTCCAGC
Downstream 100 bases:
>100_bases GAGTAGCGCCATGTTTCCCAATGTTGGAACTGCCGATCGCGTCATTCGGGTCATCGCGGGCCTTGTCATGATTCTGTTGG CCCTGTTCGGTATGGTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: CBS Domain-Containing Protein; Signal-Transduction Protein With CBS Domains; Conserved Hypothethical Protein; Signal Transduction Protein; Cbs Domain Containing Protein; Inosine-5-Monophosphate Dehydrogenase; Signal Transduction Protein With Cbs Domains
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MRVSEICSRRIVHIPASAALQMAARLMRDQCLRALFVTEHGVTGMRVVGIVTDRDMVVHGLANRADCAQTTISEVMTRGV LTIQGHAVISEALRTMLGHGLHRLAVIDDQQQLIGMLTLDDTIRAMGSEWTLLAGILGRDRCADQGSETSPHLVVSDARP MSFHQ
Sequences:
>Translated_165_residues MRVSEICSRRIVHIPASAALQMAARLMRDQCLRALFVTEHGVTGMRVVGIVTDRDMVVHGLANRADCAQTTISEVMTRGV LTIQGHAVISEALRTMLGHGLHRLAVIDDQQQLIGMLTLDDTIRAMGSEWTLLAGILGRDRCADQGSETSPHLVVSDARP MSFHQ >Mature_165_residues MRVSEICSRRIVHIPASAALQMAARLMRDQCLRALFVTEHGVTGMRVVGIVTDRDMVVHGLANRADCAQTTISEVMTRGV LTIQGHAVISEALRTMLGHGLHRLAVIDDQQQLIGMLTLDDTIRAMGSEWTLLAGILGRDRCADQGSETSPHLVVSDARP MSFHQ
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18037; Mature: 18037
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVSEICSRRIVHIPASAALQMAARLMRDQCLRALFVTEHGVTGMRVVGIVTDRDMVVHG CCHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHH LANRADCAQTTISEVMTRGVLTIQGHAVISEALRTMLGHGLHRLAVIDDQQQLIGMLTLD CCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCHHEEEEECCHHHHHHHHHHH DTIRAMGSEWTLLAGILGRDRCADQGSETSPHLVVSDARPMSFHQ HHHHHCCCCHHHHHHHHCCHHHCCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure MRVSEICSRRIVHIPASAALQMAARLMRDQCLRALFVTEHGVTGMRVVGIVTDRDMVVHG CCHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHH LANRADCAQTTISEVMTRGVLTIQGHAVISEALRTMLGHGLHRLAVIDDQQQLIGMLTLD CCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCHHEEEEECCHHHHHHHHHHH DTIRAMGSEWTLLAGILGRDRCADQGSETSPHLVVSDARPMSFHQ HHHHHCCCCHHHHHHHHCCHHHCCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA