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The map label for this gene is 17544887

Identifier: 17544887

GI number: 17544887

Start: 188360

End: 189604

Strand: Reverse

Name: 17544887

Synonym: RSc0168

Alternate gene names: NA

Gene position: 189604-188360 (Counterclockwise)

Preceding gene: 17544888

Following gene: 17544886

Centisome position: 5.1

GC content: 63.05

Gene sequence:

>1245_bases
ATGGGCCTCGGCGCGGCCTATCAGCTCGTCAAGGACGGGCGCAAGCCCGTGATCTTCGAGGCCGACGACAGGGTGGGCGG
CATGGCCGCCTGCTTCGACTTCGGCGGGCTCTCGATCGAGCGGTACTACCACTTCCACGCGATTTCCGATCATGCCTTCC
TGGAAGTGCTGCGGGAACTCGGCATCGAAGACAAGATGCAGTGGCGCGAGACGAAGATGGGCTACTTCTACCAGGGCCGT
GTGCAGCCCTGGGGCAACCCCATCGCGCTACTGAAGTTCAAGGGGCTGAGCCTGTCGGCCAAGATCCGCTACGGGCTGCA
CGCCTTCCTGTCGACCAAGCGCAACAACTGGAAGCCGCTGGACCGCATCGAAGCCTCGGGCTGGATCCGCCGCTGGATCG
GCGAGGAGGCCTGGGAAGTGCTGTGGCGGCGCCTGTTCGACTACAAGTTCTACGACCACGCGTACAACCTGTCCGCGGCC
TGGATCTGGAGTCGGATCCGCCGCATCGGGCGCTCGCGCTACGACCTCTTCCGCGAGAAGCTCGGCTATCTGGAGGGCGG
CTCCGACACGCTGCTCGAAGGCATGCGCCGCTACATCGAAGCCAACGGCGGCGAATTCCGGCTCGGCACGCCCGTGCAGA
AAGTCGTGATCGAAGGCGGTGCGGTCAAGGGCATCGAAACGCAGGGCGGCTTCGAGCCGTTCGACAAGGTGATCAGCACG
ATTCCGCTGCCCTATGTGCCCAGGGTCATGCCCGACCTGCCGACCGACATCCTGGATGCGTTCGGGCGCGTGAAGAACAT
CGCCGTGGTCTGTGTGATCGCCAAGCTGAAGAAGCGCGTCACCGAGAACTTCTGGCTGAACACGAACGATCCGGACATGG
ACATCCCCGGCATCGTCGAATACACCAACCTGCGGCCGCTCGATCAGCACATCGTCTACGTGCCGTTCTACATGCCCGGC
GAGCATCCGAAATACCAGGAAGCCGACGCCGTCTTCATCGACAAGGTCAAGCATTACCTGATGAAGGTCAATCCGGACCT
GACCGCAGACGATTTCATCGACGTGCGCGCCAGCCGCTACCGCTTCGCGCAGCCGATCTGCGAACCCGGCTATCTCGACC
GCCTGCCGCCGATCCAGTTGCCGATCAAGGGTCTGCTGGTTGCCGACACGTCGTACTACTATCCGGAGGACCGGGGCATC
TCGGAGAGCATCGGACTGTCGCGCAAGATGGCGAGGATGCTGTGA

Upstream 100 bases:

>100_bases
GAGACGTTCAACGATCCGACCTACAGTCACATCGCGCTTGAATTCTGACGGGACGACGACCATGAGTACGGAACGCATTG
CAGTCCTAGGCGCGGGGCCG

Downstream 100 bases:

>100_bases
CGCGCGCGTCGGCTGCCGTCAAGCCGATCTTCCTGTCGAGGCATTTCCTGCTGTTCCTGCTGACCGGCGGCATCGCCGCC
GCGGTCAACTGGGGGAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Protoporphyrinogen Oxidase; FAD Dependent Oxidoreductase; Protoporphyrinogen Oxidase Protein; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Flavin-Containing Superfamily

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MGLGAAYQLVKDGRKPVIFEADDRVGGMAACFDFGGLSIERYYHFHAISDHAFLEVLRELGIEDKMQWRETKMGYFYQGR
VQPWGNPIALLKFKGLSLSAKIRYGLHAFLSTKRNNWKPLDRIEASGWIRRWIGEEAWEVLWRRLFDYKFYDHAYNLSAA
WIWSRIRRIGRSRYDLFREKLGYLEGGSDTLLEGMRRYIEANGGEFRLGTPVQKVVIEGGAVKGIETQGGFEPFDKVIST
IPLPYVPRVMPDLPTDILDAFGRVKNIAVVCVIAKLKKRVTENFWLNTNDPDMDIPGIVEYTNLRPLDQHIVYVPFYMPG
EHPKYQEADAVFIDKVKHYLMKVNPDLTADDFIDVRASRYRFAQPICEPGYLDRLPPIQLPIKGLLVADTSYYYPEDRGI
SESIGLSRKMARML

Sequences:

>Translated_414_residues
MGLGAAYQLVKDGRKPVIFEADDRVGGMAACFDFGGLSIERYYHFHAISDHAFLEVLRELGIEDKMQWRETKMGYFYQGR
VQPWGNPIALLKFKGLSLSAKIRYGLHAFLSTKRNNWKPLDRIEASGWIRRWIGEEAWEVLWRRLFDYKFYDHAYNLSAA
WIWSRIRRIGRSRYDLFREKLGYLEGGSDTLLEGMRRYIEANGGEFRLGTPVQKVVIEGGAVKGIETQGGFEPFDKVIST
IPLPYVPRVMPDLPTDILDAFGRVKNIAVVCVIAKLKKRVTENFWLNTNDPDMDIPGIVEYTNLRPLDQHIVYVPFYMPG
EHPKYQEADAVFIDKVKHYLMKVNPDLTADDFIDVRASRYRFAQPICEPGYLDRLPPIQLPIKGLLVADTSYYYPEDRGI
SESIGLSRKMARML
>Mature_413_residues
GLGAAYQLVKDGRKPVIFEADDRVGGMAACFDFGGLSIERYYHFHAISDHAFLEVLRELGIEDKMQWRETKMGYFYQGRV
QPWGNPIALLKFKGLSLSAKIRYGLHAFLSTKRNNWKPLDRIEASGWIRRWIGEEAWEVLWRRLFDYKFYDHAYNLSAAW
IWSRIRRIGRSRYDLFREKLGYLEGGSDTLLEGMRRYIEANGGEFRLGTPVQKVVIEGGAVKGIETQGGFEPFDKVISTI
PLPYVPRVMPDLPTDILDAFGRVKNIAVVCVIAKLKKRVTENFWLNTNDPDMDIPGIVEYTNLRPLDQHIVYVPFYMPGE
HPKYQEADAVFIDKVKHYLMKVNPDLTADDFIDVRASRYRFAQPICEPGYLDRLPPIQLPIKGLLVADTSYYYPEDRGIS
ESIGLSRKMARML

Specific function: Unknown

COG id: COG1232

COG function: function code H; Protoporphyrinogen oxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47770; Mature: 47638

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLGAAYQLVKDGRKPVIFEADDRVGGMAACFDFGGLSIERYYHFHAISDHAFLEVLREL
CCCCHHHHHHHCCCCCEEEECCCCCCCEEEEHHCCCCEEEEEEEEEEECHHHHHHHHHHC
GIEDKMQWRETKMGYFYQGRVQPWGNPIALLKFKGLSLSAKIRYGLHAFLSTKRNNWKPL
CCCHHHHHHHHCCCEEEECEECCCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCH
DRIEASGWIRRWIGEEAWEVLWRRLFDYKFYDHAYNLSAAWIWSRIRRIGRSRYDLFREK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHH
LGYLEGGSDTLLEGMRRYIEANGGEFRLGTPVQKVVIEGGAVKGIETQGGFEPFDKVIST
HCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHEECCCCEECCCCCCCCCHHHHHHHH
IPLPYVPRVMPDLPTDILDAFGRVKNIAVVCVIAKLKKRVTENFWLNTNDPDMDIPGIVE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCEE
YTNLRPLDQHIVYVPFYMPGEHPKYQEADAVFIDKVKHYLMKVNPDLTADDFIDVRASRY
ECCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
RFAQPICEPGYLDRLPPIQLPIKGLLVADTSYYYPEDRGISESIGLSRKMARML
HHHCCCCCCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCHHHHHHHHHHHHHC
>Mature Secondary Structure 
GLGAAYQLVKDGRKPVIFEADDRVGGMAACFDFGGLSIERYYHFHAISDHAFLEVLREL
CCCHHHHHHHCCCCCEEEECCCCCCCEEEEHHCCCCEEEEEEEEEEECHHHHHHHHHHC
GIEDKMQWRETKMGYFYQGRVQPWGNPIALLKFKGLSLSAKIRYGLHAFLSTKRNNWKPL
CCCHHHHHHHHCCCEEEECEECCCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCH
DRIEASGWIRRWIGEEAWEVLWRRLFDYKFYDHAYNLSAAWIWSRIRRIGRSRYDLFREK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHH
LGYLEGGSDTLLEGMRRYIEANGGEFRLGTPVQKVVIEGGAVKGIETQGGFEPFDKVIST
HCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHEECCCCEECCCCCCCCCHHHHHHHH
IPLPYVPRVMPDLPTDILDAFGRVKNIAVVCVIAKLKKRVTENFWLNTNDPDMDIPGIVE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCEE
YTNLRPLDQHIVYVPFYMPGEHPKYQEADAVFIDKVKHYLMKVNPDLTADDFIDVRASRY
ECCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
RFAQPICEPGYLDRLPPIQLPIKGLLVADTSYYYPEDRGISESIGLSRKMARML
HHHCCCCCCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA