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The map label for this gene is 17544888

Identifier: 17544888

GI number: 17544888

Start: 189657

End: 190595

Strand: Reverse

Name: 17544888

Synonym: RSc0169

Alternate gene names: NA

Gene position: 190595-189657 (Counterclockwise)

Preceding gene: 17544889

Following gene: 17544887

Centisome position: 5.13

GC content: 62.41

Gene sequence:

>939_bases
ATGAACCCAACCCGCATTGTCCTCCCAGGCGGCGCCGGCCTCGTCGGCCAGAACCTCGTGGCACGGCTCAAAGCACGCGG
CTATACCAACCTCGTCGTGCTCGACAAGCACGAGGCCAACCTCGATGTGCTGCGCTCGGTCCACCCGGATATCACCGCCG
TCTTCGCCGACCTGGCGGAACCGGGCGACTGGGCAAGGCATTTCGAAGGCGCCGATGTGGTCGTGATGCTGCAGGCCCAG
ATCGGTGCGCCGACGCGCGAGCCTTTCGTCCGCAACAATATCGACTCGACGCGCTGCGTGCTCGAGGTAATCAAGCAGCA
TGCCATTCCATACACCGTCCATATCAGCTCGTCCGTCGTCAAATCGGTCGGCGAGGACTGGTACACCGAGACCAAGCGCG
AGCAGGAAGCGATCGTGCTCGCCTCGGGCATCGGATGTGTCGTGCTGCGGCCGACGCTCATGTTCGGCTGGTTCGACCGC
AAGCATCTCGGCTGGCTGTCGCGCTTCATGCAGCGCGTGCCGGTGTTTCCGATTCCGGGCAGCGGGCGCTACATGCGCCA
GCCGCTTTACGTCGGCGACTTCTGCAACGTGATCATCAGCTGCATCGATTCGCGGATCCAGGGGCAGACCTTCGACATCA
CCGGGCTGGAGCGCATCGACTACATCGATATCATCCGCCAGATCAAGCGCGTGACCCGCGCACGCTGCGCGATCGTGCGC
ATTCCCTACGGCCTGTTCCATATCCTGCTGAAGGTCTATGCCCTCTTCAGCAAGAACCCGCCATTCACGGCGGACCAGCT
CAAGGCTCTGACGGCCGGCGACGAGTTCGACGTGATCGATTGGGAACGCATCTTCGCCATCCGCGCGACACCGTTTGCCC
AGGCGATGGAGGAGACGTTCAACGATCCGACCTACAGTCACATCGCGCTTGAATTCTGA

Upstream 100 bases:

>100_bases
CAAGACCTCCGCACCATGACCCACTGCCGCCCTGCATCAGCCGCCCGTATCACGTATCGATGAGCAGGCAAGACACCCTC
AGCATTTCCAGAGCAAACGC

Downstream 100 bases:

>100_bases
CGGGACGACGACCATGAGTACGGAACGCATTGCAGTCCTAGGCGCGGGGCCGATGGGCCTCGGCGCGGCCTATCAGCTCG
TCAAGGACGGGCGCAAGCCC

Product: transmembrane oxidoreductase

Products: NA

Alternate protein names: NADH-Ubiquinone Oxidoreductase; NADH Dehydrogenase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD Dependent Epimerase/Dehydratase/Dehydrogenase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; Nucleoside-Diphosphate-Sugar Epimerase; NADH Dehydrogenase/Oxidoreductase-Like Protein; Transmembrane Oxidoreductase Protein; Methyltransferase FkbM; NDP-Sugar Oxidoreductase; NADH Dehydrogenase-Like Protein; NAD Dependent Epimerase; NADH Dehydrogenase 1 Alpha Subcomplex; DTDP-Glucose 4 6-Dehydratase; Nucleoside-Diphosphate Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family; Nucleoside-Diphosphate-Sugar Epimerases-Like Protein; NADH-Ubiquinone Oxidoreductase -Like Protein; NAD Dependent Epimerase/Dehydratase Family Protein; NmrA-Like Protein; NADH-Ubiquinone Oxidoreductase Putativ; NADH-Quinone Oxidoreductase; NADH Dehydrogenase/NADH Dehydrogenase Protein; NADH-Ubiquinone Oxidoreductase Subunit; NADH Dehydrogenase Subunit

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MNPTRIVLPGGAGLVGQNLVARLKARGYTNLVVLDKHEANLDVLRSVHPDITAVFADLAEPGDWARHFEGADVVVMLQAQ
IGAPTREPFVRNNIDSTRCVLEVIKQHAIPYTVHISSSVVKSVGEDWYTETKREQEAIVLASGIGCVVLRPTLMFGWFDR
KHLGWLSRFMQRVPVFPIPGSGRYMRQPLYVGDFCNVIISCIDSRIQGQTFDITGLERIDYIDIIRQIKRVTRARCAIVR
IPYGLFHILLKVYALFSKNPPFTADQLKALTAGDEFDVIDWERIFAIRATPFAQAMEETFNDPTYSHIALEF

Sequences:

>Translated_312_residues
MNPTRIVLPGGAGLVGQNLVARLKARGYTNLVVLDKHEANLDVLRSVHPDITAVFADLAEPGDWARHFEGADVVVMLQAQ
IGAPTREPFVRNNIDSTRCVLEVIKQHAIPYTVHISSSVVKSVGEDWYTETKREQEAIVLASGIGCVVLRPTLMFGWFDR
KHLGWLSRFMQRVPVFPIPGSGRYMRQPLYVGDFCNVIISCIDSRIQGQTFDITGLERIDYIDIIRQIKRVTRARCAIVR
IPYGLFHILLKVYALFSKNPPFTADQLKALTAGDEFDVIDWERIFAIRATPFAQAMEETFNDPTYSHIALEF
>Mature_312_residues
MNPTRIVLPGGAGLVGQNLVARLKARGYTNLVVLDKHEANLDVLRSVHPDITAVFADLAEPGDWARHFEGADVVVMLQAQ
IGAPTREPFVRNNIDSTRCVLEVIKQHAIPYTVHISSSVVKSVGEDWYTETKREQEAIVLASGIGCVVLRPTLMFGWFDR
KHLGWLSRFMQRVPVFPIPGSGRYMRQPLYVGDFCNVIISCIDSRIQGQTFDITGLERIDYIDIIRQIKRVTRARCAIVR
IPYGLFHILLKVYALFSKNPPFTADQLKALTAGDEFDVIDWERIFAIRATPFAQAMEETFNDPTYSHIALEF

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35217; Mature: 35217

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPTRIVLPGGAGLVGQNLVARLKARGYTNLVVLDKHEANLDVLRSVHPDITAVFADLAE
CCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHCC
PGDWARHFEGADVVVMLQAQIGAPTREPFVRNNIDSTRCVLEVIKQHAIPYTVHISSSVV
CCCHHHHCCCCCEEEEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCEEEEECHHHH
KSVGEDWYTETKREQEAIVLASGIGCVVLRPTLMFGWFDRKHLGWLSRFMQRVPVFPIPG
HHHHHHHHHHHCCCCCEEEEECCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
SGRYMRQPLYVGDFCNVIISCIDSRIQGQTFDITGLERIDYIDIIRQIKRVTRARCAIVR
CCCHHCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHEEEE
IPYGLFHILLKVYALFSKNPPFTADQLKALTAGDEFDVIDWERIFAIRATPFAQAMEETF
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHEEEEECCHHHHHHHHHC
NDPTYSHIALEF
CCCCCCEEEEEC
>Mature Secondary Structure
MNPTRIVLPGGAGLVGQNLVARLKARGYTNLVVLDKHEANLDVLRSVHPDITAVFADLAE
CCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHCC
PGDWARHFEGADVVVMLQAQIGAPTREPFVRNNIDSTRCVLEVIKQHAIPYTVHISSSVV
CCCHHHHCCCCCEEEEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCEEEEECHHHH
KSVGEDWYTETKREQEAIVLASGIGCVVLRPTLMFGWFDRKHLGWLSRFMQRVPVFPIPG
HHHHHHHHHHHCCCCCEEEEECCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
SGRYMRQPLYVGDFCNVIISCIDSRIQGQTFDITGLERIDYIDIIRQIKRVTRARCAIVR
CCCHHCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHEEEE
IPYGLFHILLKVYALFSKNPPFTADQLKALTAGDEFDVIDWERIFAIRATPFAQAMEETF
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHEEEEECCHHHHHHHHHC
NDPTYSHIALEF
CCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA