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The map label for this gene is yfgC [C]

Identifier: 17544872

GI number: 17544872

Start: 172934

End: 173878

Strand: Reverse

Name: yfgC [C]

Synonym: RSc0153

Alternate gene names: 17544872

Gene position: 173878-172934 (Counterclockwise)

Preceding gene: 17544874

Following gene: 17544871

Centisome position: 4.68

GC content: 71.32

Gene sequence:

>945_bases
ATGCCACGCCTCGCGCGCTCCCTGCCCCTCCTGCTCGGACTCGGCCTGGCCGCCTGGGCCGGCGCCACGGACGGCCCGCT
GCCCGTGCCCGCCGACGGCGTGAAGCTGGAAGCGCCGACCACCGCCTCGCCCAGCATCCGCCTGGTGATCCCCGCCGAGG
AAATCGAGCGCCGCGCGCTGGCCGAATACCGCCAGATCATCGACAACGCCGCCCGCGAGGGCGCCCTCGCGCCGGACAGC
GTGCCGGACCTCGCCCGCATCCGCGCCATCGTGCAGCGCCTGGTGCCGCACGCGCCGCGCTGGAACCCCGACGCCGCGCA
CTGGCAGTGGGAGGTCAACCTGATCGGCGCCGCGCAGGTCAACGCGTTCTGCATGCCGGGCGGCAAGATCGCCGTGTTCT
CCGGCCTGCTGGAGCGGTTCAGGCTGACCGACGACGAGCTCGCCATGGCGCTCGGCCACGAGATCGCCCACGCGCTGCGC
GAACACGCCCGTGCCCGCGCCGGCCAGCGCGAGATCACCAACCTGGGCGCCAATGTCATCTCGCAGCTGTTCGGTTTCGG
CAACCGCGGCGACGCCGGTTTCGGCGAGGGCGCCAAAATGCACCTGCTGGCATTTTCCCGCGCCGAGGAAACCGAGGCCG
ACCTGATCGGCATGGATATCGCCGCGCGCGCCGGTTTCGATCCGCGCGCCGCGCTCACGCTGTGGCAGAAAATGGGCTCG
ATCGGGGGCGCCGAGCAGAAGCAGTTCCTGTCCACCCACCCGTCCGGGCGTTCGCGGATGACCGTGCTGTCGCGCCACCT
GCCGGAAACGCTGCCGCTGTACGCCGACGCCCTGCGGATGCCGATGGCGAAACTGCCGGAGTACCGGTCGAATATGCAAT
ATCTCGGCGCGGCCCCGGTCGACAACGGGGACGAGGCACCGATGCGGCCGATGGTGCAGCAGTAG

Upstream 100 bases:

>100_bases
GTCATGCGGCGGGAGGGCTGGCGGACGATAGGGGTTGCCGCGAAGCGCGGCAGGACGCATTGACCGATATTATTACCCAG
TCGACCCAGCCTCCCTCCGC

Downstream 100 bases:

>100_bases
ATCAGCGTCGCCGCATATTCCGGCGATCACGGGCAGGCATATCCCGACATTCCTGTAGGCTCTGCGGCGCAGCGTGGCTG
CATTCGACACCACCGCAAAC

Product: signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MPRLARSLPLLLGLGLAAWAGATDGPLPVPADGVKLEAPTTASPSIRLVIPAEEIERRALAEYRQIIDNAAREGALAPDS
VPDLARIRAIVQRLVPHAPRWNPDAAHWQWEVNLIGAAQVNAFCMPGGKIAVFSGLLERFRLTDDELAMALGHEIAHALR
EHARARAGQREITNLGANVISQLFGFGNRGDAGFGEGAKMHLLAFSRAEETEADLIGMDIAARAGFDPRAALTLWQKMGS
IGGAEQKQFLSTHPSGRSRMTVLSRHLPETLPLYADALRMPMAKLPEYRSNMQYLGAAPVDNGDEAPMRPMVQQ

Sequences:

>Translated_314_residues
MPRLARSLPLLLGLGLAAWAGATDGPLPVPADGVKLEAPTTASPSIRLVIPAEEIERRALAEYRQIIDNAAREGALAPDS
VPDLARIRAIVQRLVPHAPRWNPDAAHWQWEVNLIGAAQVNAFCMPGGKIAVFSGLLERFRLTDDELAMALGHEIAHALR
EHARARAGQREITNLGANVISQLFGFGNRGDAGFGEGAKMHLLAFSRAEETEADLIGMDIAARAGFDPRAALTLWQKMGS
IGGAEQKQFLSTHPSGRSRMTVLSRHLPETLPLYADALRMPMAKLPEYRSNMQYLGAAPVDNGDEAPMRPMVQQ
>Mature_313_residues
PRLARSLPLLLGLGLAAWAGATDGPLPVPADGVKLEAPTTASPSIRLVIPAEEIERRALAEYRQIIDNAAREGALAPDSV
PDLARIRAIVQRLVPHAPRWNPDAAHWQWEVNLIGAAQVNAFCMPGGKIAVFSGLLERFRLTDDELAMALGHEIAHALRE
HARARAGQREITNLGANVISQLFGFGNRGDAGFGEGAKMHLLAFSRAEETEADLIGMDIAARAGFDPRAALTLWQKMGSI
GGAEQKQFLSTHPSGRSRMTVLSRHLPETLPLYADALRMPMAKLPEYRSNMQYLGAAPVDNGDEAPMRPMVQQ

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=278, Percent_Identity=29.136690647482, Blast_Score=92, Evalue=6e-19,
Organism=Escherichia coli, GI1788840, Length=187, Percent_Identity=31.5508021390374, Blast_Score=70, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6322940, Length=180, Percent_Identity=32.7777777777778, Blast_Score=93, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 34021; Mature: 33889

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLARSLPLLLGLGLAAWAGATDGPLPVPADGVKLEAPTTASPSIRLVIPAEEIERRAL
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECHHHHHHHHH
AEYRQIIDNAAREGALAPDSVPDLARIRAIVQRLVPHAPRWNPDAAHWQWEVNLIGAAQV
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCC
NAFCMPGGKIAVFSGLLERFRLTDDELAMALGHEIAHALREHARARAGQREITNLGANVI
CEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SQLFGFGNRGDAGFGEGAKMHLLAFSRAEETEADLIGMDIAARAGFDPRAALTLWQKMGS
HHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
IGGAEQKQFLSTHPSGRSRMTVLSRHLPETLPLYADALRMPMAKLPEYRSNMQYLGAAPV
CCCHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHCCHHHCCCCEECCCCC
DNGDEAPMRPMVQQ
CCCCCCCCCCCCCC
>Mature Secondary Structure 
PRLARSLPLLLGLGLAAWAGATDGPLPVPADGVKLEAPTTASPSIRLVIPAEEIERRAL
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECHHHHHHHHH
AEYRQIIDNAAREGALAPDSVPDLARIRAIVQRLVPHAPRWNPDAAHWQWEVNLIGAAQV
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCC
NAFCMPGGKIAVFSGLLERFRLTDDELAMALGHEIAHALREHARARAGQREITNLGANVI
CEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
SQLFGFGNRGDAGFGEGAKMHLLAFSRAEETEADLIGMDIAARAGFDPRAALTLWQKMGS
HHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
IGGAEQKQFLSTHPSGRSRMTVLSRHLPETLPLYADALRMPMAKLPEYRSNMQYLGAAPV
CCCHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHCCHHHCCCCEECCCCC
DNGDEAPMRPMVQQ
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]