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The map label for this gene is 17544874

Identifier: 17544874

GI number: 17544874

Start: 175246

End: 176439

Strand: Reverse

Name: 17544874

Synonym: RSc0155

Alternate gene names: NA

Gene position: 176439-175246 (Counterclockwise)

Preceding gene: 17544877

Following gene: 17544872

Centisome position: 4.75

GC content: 71.78

Gene sequence:

>1194_bases
ATGAGCAAAACCGTAAGTTTACCGCTTCCCAGCGAGGCCGCGCAGGCGCAGTCCGACCGCCTGTTCTCCACCATCGTCCG
CGCCGTCGAGGCCGCCGGCGGCTGGCTCCCGTTCGAGCGCTACATGGAACTGGCGCTGTACGCGCCGGGCCTGGGCTACT
ACAGCGGCGGCGCGGCCAAGTTCGGCCGCCGCGTGGAAGACGGCGGAGACTTCATCACCGCACCGGAACTGACGCCGTTC
TTCGGCCGCACCGTCGCGCACCAGATCGCCCAGGTCCTGCAGACGCTGCCGCCCGGCCAGCGCCATGTGCTGGAGTTCGG
CGCGGGCACCGGCAGGCTCGCGGCCGACATCCTGACCGAGCTGGAGACGCTCGGCATGCGGCCGGATAGCTACGGCATCG
TCGAGCTCTCTGGCGAACTGCGCCAGCGCCAGCAACAGGCCCTGGCCGCGCTCGGCCCAGACCTGGCCGGCCTGGCCCGG
TGGCACGATGCGCTGCCCGCGCGCTTCACCGGCGTGATGGTCGGCAACGAGGTGCTCGATGCGATGCCCGTGTCGCTGTG
GGCGCGGCGCGGCGGCGTCTGGCACCGGCGCGGCGTGGCCTTCGATGCGGACCACGGCCTGCGGTGGTCCGAGCGCGTGG
CCGATCCGGCCGATGTCCCGCCCAAGCTGGCCGCCCTGCCCGGCCGCGATGACTTCGTCACCGAAGCGCACGAAGCCGCC
GAGGGCTTCATCCGCAGCGCCGGCGCGGCGCTCGAGCGCGGCCTGCTGCTGCTGCTCGACTACGGCTTTCCGGCCGGCGA
GTACTACCACGCGCACCGCGCCAACGGCACGCTGATGTGCCACTACCGCCAGCACGCGCACGACGATCCGTTCTGGCTGC
CGGGGCTGCAGGACATCACCGCGCACGTCGACTTTTCCGGCATTGCGCTGGCGGCGCGCGAGGCAGGGCTGGAAGTGCTC
GGCTATGCAAGCCAGGCGCGCTTCCTGTTGGGCGCCGGCGTGGGGCAGTTGCTGATGACGCTCGACCCCGCCGATCCGGT
CCGCTTCCTGCCAGCCGCCAACGCGGTACAGAAGCTGCTGTCGGAAGCGGAGATGGGCGAGCTGTTCAAGGCCATCGCGC
TCGGCCGGGGCCTCGACGCGGCGCTGCCGCTGGCGGGCTTTGCCGATGCGGACCGCTCGGACCGGCTAGGCTGA

Upstream 100 bases:

>100_bases
ATCACGCGGCCTACGCGGCGGGCGGCGCCGGTCACGAGGGCAATGCGGGGCAATATGGGCGATTCGTTCGGCGTCTGCGC
CATTTGTTTACAATCCGGCG

Downstream 100 bases:

>100_bases
CGTCGGCTTCGCGGCCAGGGCACGCTCCGCCTGCTCGGCCTCGTAGCGGCCGATGGTGCCGCGCATGCACCACAGCAGCG
CCAGCCCGGGGAAGGCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MSKTVSLPLPSEAAQAQSDRLFSTIVRAVEAAGGWLPFERYMELALYAPGLGYYSGGAAKFGRRVEDGGDFITAPELTPF
FGRTVAHQIAQVLQTLPPGQRHVLEFGAGTGRLAADILTELETLGMRPDSYGIVELSGELRQRQQQALAALGPDLAGLAR
WHDALPARFTGVMVGNEVLDAMPVSLWARRGGVWHRRGVAFDADHGLRWSERVADPADVPPKLAALPGRDDFVTEAHEAA
EGFIRSAGAALERGLLLLLDYGFPAGEYYHAHRANGTLMCHYRQHAHDDPFWLPGLQDITAHVDFSGIALAAREAGLEVL
GYASQARFLLGAGVGQLLMTLDPADPVRFLPAANAVQKLLSEAEMGELFKAIALGRGLDAALPLAGFADADRSDRLG

Sequences:

>Translated_397_residues
MSKTVSLPLPSEAAQAQSDRLFSTIVRAVEAAGGWLPFERYMELALYAPGLGYYSGGAAKFGRRVEDGGDFITAPELTPF
FGRTVAHQIAQVLQTLPPGQRHVLEFGAGTGRLAADILTELETLGMRPDSYGIVELSGELRQRQQQALAALGPDLAGLAR
WHDALPARFTGVMVGNEVLDAMPVSLWARRGGVWHRRGVAFDADHGLRWSERVADPADVPPKLAALPGRDDFVTEAHEAA
EGFIRSAGAALERGLLLLLDYGFPAGEYYHAHRANGTLMCHYRQHAHDDPFWLPGLQDITAHVDFSGIALAAREAGLEVL
GYASQARFLLGAGVGQLLMTLDPADPVRFLPAANAVQKLLSEAEMGELFKAIALGRGLDAALPLAGFADADRSDRLG
>Mature_396_residues
SKTVSLPLPSEAAQAQSDRLFSTIVRAVEAAGGWLPFERYMELALYAPGLGYYSGGAAKFGRRVEDGGDFITAPELTPFF
GRTVAHQIAQVLQTLPPGQRHVLEFGAGTGRLAADILTELETLGMRPDSYGIVELSGELRQRQQQALAALGPDLAGLARW
HDALPARFTGVMVGNEVLDAMPVSLWARRGGVWHRRGVAFDADHGLRWSERVADPADVPPKLAALPGRDDFVTEAHEAAE
GFIRSAGAALERGLLLLLDYGFPAGEYYHAHRANGTLMCHYRQHAHDDPFWLPGLQDITAHVDFSGIALAAREAGLEVLG
YASQARFLLGAGVGQLLMTLDPADPVRFLPAANAVQKLLSEAEMGELFKAIALGRGLDAALPLAGFADADRSDRLG

Specific function: Unknown

COG id: COG1565

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI193211224, Length=408, Percent_Identity=26.7156862745098, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24645885, Length=398, Percent_Identity=27.8894472361809, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42651; Mature: 42520

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTVSLPLPSEAAQAQSDRLFSTIVRAVEAAGGWLPFERYMELALYAPGLGYYSGGAAK
CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHH
FGRRVEDGGDFITAPELTPFFGRTVAHQIAQVLQTLPPGQRHVLEFGAGTGRLAADILTE
HCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCHHHHHHHHH
LETLGMRPDSYGIVELSGELRQRQQQALAALGPDLAGLARWHDALPARFTGVMVGNEVLD
HHHHCCCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHEEEECHHHHH
AMPVSLWARRGGVWHRRGVAFDADHGLRWSERVADPADVPPKLAALPGRDDFVTEAHEAA
HHHHHHHHHCCCCEECCCCEEECCCCCCHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHH
EGFIRSAGAALERGLLLLLDYGFPAGEYYHAHRANGTLMCHYRQHAHDDPFWLPGLQDIT
HHHHHHHHHHHHCCEEEEEECCCCCCCCEEEECCCCEEEEEEHHHCCCCCCCCCCHHHHH
AHVDFSGIALAAREAGLEVLGYASQARFLLGAGVGQLLMTLDPADPVRFLPAANAVQKLL
HCCCCCHHHHHHHHCCHHHCCHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHH
SEAEMGELFKAIALGRGLDAALPLAGFADADRSDRLG
HHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKTVSLPLPSEAAQAQSDRLFSTIVRAVEAAGGWLPFERYMELALYAPGLGYYSGGAAK
CCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHH
FGRRVEDGGDFITAPELTPFFGRTVAHQIAQVLQTLPPGQRHVLEFGAGTGRLAADILTE
HCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCHHHHHHHHH
LETLGMRPDSYGIVELSGELRQRQQQALAALGPDLAGLARWHDALPARFTGVMVGNEVLD
HHHHCCCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHEEEECHHHHH
AMPVSLWARRGGVWHRRGVAFDADHGLRWSERVADPADVPPKLAALPGRDDFVTEAHEAA
HHHHHHHHHCCCCEECCCCEEECCCCCCHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHH
EGFIRSAGAALERGLLLLLDYGFPAGEYYHAHRANGTLMCHYRQHAHDDPFWLPGLQDIT
HHHHHHHHHHHHCCEEEEEECCCCCCCCEEEECCCCEEEEEEHHHCCCCCCCCCCHHHHH
AHVDFSGIALAAREAGLEVLGYASQARFLLGAGVGQLLMTLDPADPVRFLPAANAVQKLL
HCCCCCHHHHHHHHCCHHHCCHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHH
SEAEMGELFKAIALGRGLDAALPLAGFADADRSDRLG
HHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA