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The map label for this gene is pecM [H]

Identifier: 17544870

GI number: 17544870

Start: 171138

End: 172067

Strand: Direct

Name: pecM [H]

Synonym: RSc0151

Alternate gene names: 17544870

Gene position: 171138-172067 (Clockwise)

Preceding gene: 17544869

Following gene: 17544873

Centisome position: 4.6

GC content: 75.16

Gene sequence:

>930_bases
ATGCCATCCCGCCGTCTTGCCACGATCCTGGCCACCGCGCTGGCGCCATGCCTGTGGGGCACGACCTACATCGTCTTCAC
GCAGACCCTGCCGGTTTCGCATCCGCTGCTGGTGGGTGCCCTGCGCGCGCTGCCGGCGGGCATCCTGCTGATGCTGCTCG
GCCCCGGCCTGCCGCCGCGCGACAAGCTGGGACGGCTCGCGCTGGTCGGGCTGGCGAACATCGGCGTGTTCTTCGCGCTG
CTGTTCGTGGCGGCGGCGCGGCTGCCCGGCGGCGTGGCGGCAACCGTGATGTCGGTGCAGCCGCTGCTCGTCGGGCTGCT
GGCGTGGCCCGTGCTGCGGCGGCGCCCGCGTCCGGTACAGCTGCCGGCGGCGCTGGCCGGGTCGTTGGGCGTGGGGCTGC
TGATCCTGGGGCCGGCGGCGCGGTTGGATGCGATCGGCGTGGCGGCGGCCCTGGGCGCGGCGGCATCGATGGCGACCGGC
ACCGTGCTGATCGAACGCTGGGGCCGCGTCGGCACGCCGCTGGCCTTGGCCGCCTGGCAGTTGGCGCTGGGCGGGCTGGT
GCTGCTGCCGGTGGCCCTGGCGGTGGAGGGGCTGCCGCCCGTGCCCACGCTGCGCAATGCCGCCGGCTTTGCCTACCTGA
TCGTCATCGGCACGGCGCTGGGCTACTGGCTGTGGGTGCGCGGCATCGGCAGGCTCGGGGCCGACGTGACCTTCCTGTCG
CTGCTGAGCCCGCTGACGGCCACCGTGCTCGGCGCGCTGCTGCTGGGCGAGTGGTTCAGCCCCGTGCAGGCGGCGGGCGC
GCTGCTGATCCTGGCGGCGACGGTAGCGGGGATGGCGCTGTCGCGGCGCGCGCGCATGGCGGGCACGCCGGAGCAACGCC
CCGCGAGGCCGGTGCACCCTGAAGGGCCTCGCGTCGGGGCATCCAGGTGA

Upstream 100 bases:

>100_bases
GGCGTTCAGCGGGCCTTTTCCTGCCTGAAGGCGGCGCAATGCCGGGCCCCGGCTTGCTCAGTTATTTCGATTTCAAATAA
TCAAATATGGAGTGAATGCC

Downstream 100 bases:

>100_bases
CTACTGGACCGACGTCGCCACCTGCGAGAACGTCTTGGTGAAATTGGACGGCGCGCCCGCGGGGTACGTGTACGTGAAGT
CGCACTTGACGATGCGGCCG

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MPSRRLATILATALAPCLWGTTYIVFTQTLPVSHPLLVGALRALPAGILLMLLGPGLPPRDKLGRLALVGLANIGVFFAL
LFVAAARLPGGVAATVMSVQPLLVGLLAWPVLRRRPRPVQLPAALAGSLGVGLLILGPAARLDAIGVAAALGAAASMATG
TVLIERWGRVGTPLALAAWQLALGGLVLLPVALAVEGLPPVPTLRNAAGFAYLIVIGTALGYWLWVRGIGRLGADVTFLS
LLSPLTATVLGALLLGEWFSPVQAAGALLILAATVAGMALSRRARMAGTPEQRPARPVHPEGPRVGASR

Sequences:

>Translated_309_residues
MPSRRLATILATALAPCLWGTTYIVFTQTLPVSHPLLVGALRALPAGILLMLLGPGLPPRDKLGRLALVGLANIGVFFAL
LFVAAARLPGGVAATVMSVQPLLVGLLAWPVLRRRPRPVQLPAALAGSLGVGLLILGPAARLDAIGVAAALGAAASMATG
TVLIERWGRVGTPLALAAWQLALGGLVLLPVALAVEGLPPVPTLRNAAGFAYLIVIGTALGYWLWVRGIGRLGADVTFLS
LLSPLTATVLGALLLGEWFSPVQAAGALLILAATVAGMALSRRARMAGTPEQRPARPVHPEGPRVGASR
>Mature_308_residues
PSRRLATILATALAPCLWGTTYIVFTQTLPVSHPLLVGALRALPAGILLMLLGPGLPPRDKLGRLALVGLANIGVFFALL
FVAAARLPGGVAATVMSVQPLLVGLLAWPVLRRRPRPVQLPAALAGSLGVGLLILGPAARLDAIGVAAALGAAASMATGT
VLIERWGRVGTPLALAAWQLALGGLVLLPVALAVEGLPPVPTLRNAAGFAYLIVIGTALGYWLWVRGIGRLGADVTFLSL
LSPLTATVLGALLLGEWFSPVQAAGALLILAATVAGMALSRRARMAGTPEQRPARPVHPEGPRVGASR

Specific function: Involved in pectinase, cellulase, and blue pigment regulation [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31671; Mature: 31539

Theoretical pI: Translated: 12.39; Mature: 12.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSRRLATILATALAPCLWGTTYIVFTQTLPVSHPLLVGALRALPAGILLMLLGPGLPPR
CCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH
DKLGRLALVGLANIGVFFALLFVAAARLPGGVAATVMSVQPLLVGLLAWPVLRRRPRPVQ
HHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LPAALAGSLGVGLLILGPAARLDAIGVAAALGAAASMATGTVLIERWGRVGTPLALAAWQ
CHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LALGGLVLLPVALAVEGLPPVPTLRNAAGFAYLIVIGTALGYWLWVRGIGRLGADVTFLS
HHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LLSPLTATVLGALLLGEWFSPVQAAGALLILAATVAGMALSRRARMAGTPEQRPARPVHP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
EGPRVGASR
CCCCCCCCC
>Mature Secondary Structure 
PSRRLATILATALAPCLWGTTYIVFTQTLPVSHPLLVGALRALPAGILLMLLGPGLPPR
CCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH
DKLGRLALVGLANIGVFFALLFVAAARLPGGVAATVMSVQPLLVGLLAWPVLRRRPRPVQ
HHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LPAALAGSLGVGLLILGPAARLDAIGVAAALGAAASMATGTVLIERWGRVGTPLALAAWQ
CHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LALGGLVLLPVALAVEGLPPVPTLRNAAGFAYLIVIGTALGYWLWVRGIGRLGADVTFLS
HHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LLSPLTATVLGALLLGEWFSPVQAAGALLILAATVAGMALSRRARMAGTPEQRPARPVHP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
EGPRVGASR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8022282 [H]