| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is ampG [H]
Identifier: 17544873
GI number: 17544873
Start: 173974
End: 175254
Strand: Direct
Name: ampG [H]
Synonym: RSc0154
Alternate gene names: 17544873
Gene position: 173974-175254 (Clockwise)
Preceding gene: 17544870
Following gene: 17544875
Centisome position: 4.68
GC content: 70.65
Gene sequence:
>1281_bases ATGACCTTCCACGATTACCTCGACGTGTTCCGCAACCGCCGCATCGGCGCGATGCTGCTGCTGGGCTTCGCCTCCGGCCT GCCGCTGGCGCTGACCTCCGGCACGCTGCAGGCATGGATGACGGTGGAGGGACTGGACATCCGCACCATCGGGCTGTTCT CGCTGGTGGGGCAGGCGTACATCTTCAAGTTCCTGTGGGCGCCGCTGATGGATCGCTTCACGCCGCCGCTGATCGGCCGG CGGCGCGGCTGGCTGGTGCTGACGCAGGCCGGGCTGGCGGCGTCGATCGCGGCCATGGCGTTCTGTCCGCCGCATGCCGC GCTGTGGGCGCTGGCGGGCCTGGCGGTGCTGGTGGCCTTCCTCTCGGCCTCGCAGGACATCGTCTTCGATGCCTACAGCA CCGACGTGCTGCATGCCAGCGAGCGCGGCGTGGGCGCGGCGGTCAAGGTGCTCGGCTACCGGCTGGCGATGCTGGTCTCC GGCGGCCTGGCGCTGTGGCTGGCCGATCGCGTGATGGGCTGGAGCAGCATGTACCTGCTGATGGCCGGGCTGATGGCGCT ATTTGTCCTGGCGACGCTGTGGTCGCCCGAGCCGGAGGCGGCGGCGCGGCCGCCCCGCAGCCTGCAGGAGGCGGTGGTCG GGCCGCTGCGGGATTTCTTCGCGCGCCGCGGCGCCTGGGCGCTGCTGGCGCTGATCGTGCTCTACAAGCTGGGCGATGCG TTCGCCGGCAGCCTGTCGACCACGTTCCTGATCCGCGGCGTCGGCTTCTCGGCGGGCGAGGTGGGCATCGTCAACAAGAC GCTGGGCCTGGTCGCCACCATCATCGGCGCGCTCTACGGCGGCACGCTGATGGTGCGGCTGGGGCTGGTGCGCGCGCTGC TGCTGTTCGGCGTGCTGCAGGCGGTGTCCAACCTGGGCTACTGGGTGCTGGCCGTCACGCCGCAGCACTTGTGGACCATG GCGCTGGCCATCGGCATCGAGAACCTCTGCGGCGGCATGGGCACGGCCGCCTTCGTGGCGCTGCTGATGGCGCTGTGCAA CCGCTCGTTCTCGGCGACGCAGTATGCGCTGCTGTCGGCGCTGGCCTCCATCGGCCGCGTCTATGTCGGGCCGACTTCCG GCTACCTGGTGGAGGCCTACGGCTGGCCCGCGTTTTACCTGATGACGGTGGCGTTCGCCTTCCCCGGGCTGGCGCTGCTG TGGTGCATGCGCGGCACCATCGGCCGCTACGAGGCCGAGCAGGCGGAGCGTGCCCTGGCCGCGAAGCCGACGTCAGCCTA G
Upstream 100 bases:
>100_bases GGCATGCGGAGGGAGGCTGGGTCGACTGGGTAATAATATCGGTCAATGCGTCCTGCCGCGCTTCGCGGCAACCCCTATCG TCCGCCAGCCCTCCCGCCGC
Downstream 100 bases:
>100_bases CCGGTCCGAGCGGTCCGCATCGGCAAAGCCCGCCAGCGGCAGCGCCGCGTCGAGGCCCCGGCCGAGCGCGATGGCCTTGA ACAGCTCGCCCATCTCCGCT
Product: muropeptide transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MTFHDYLDVFRNRRIGAMLLLGFASGLPLALTSGTLQAWMTVEGLDIRTIGLFSLVGQAYIFKFLWAPLMDRFTPPLIGR RRGWLVLTQAGLAASIAAMAFCPPHAALWALAGLAVLVAFLSASQDIVFDAYSTDVLHASERGVGAAVKVLGYRLAMLVS GGLALWLADRVMGWSSMYLLMAGLMALFVLATLWSPEPEAAARPPRSLQEAVVGPLRDFFARRGAWALLALIVLYKLGDA FAGSLSTTFLIRGVGFSAGEVGIVNKTLGLVATIIGALYGGTLMVRLGLVRALLLFGVLQAVSNLGYWVLAVTPQHLWTM ALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLSALASIGRVYVGPTSGYLVEAYGWPAFYLMTVAFAFPGLALL WCMRGTIGRYEAEQAERALAAKPTSA
Sequences:
>Translated_426_residues MTFHDYLDVFRNRRIGAMLLLGFASGLPLALTSGTLQAWMTVEGLDIRTIGLFSLVGQAYIFKFLWAPLMDRFTPPLIGR RRGWLVLTQAGLAASIAAMAFCPPHAALWALAGLAVLVAFLSASQDIVFDAYSTDVLHASERGVGAAVKVLGYRLAMLVS GGLALWLADRVMGWSSMYLLMAGLMALFVLATLWSPEPEAAARPPRSLQEAVVGPLRDFFARRGAWALLALIVLYKLGDA FAGSLSTTFLIRGVGFSAGEVGIVNKTLGLVATIIGALYGGTLMVRLGLVRALLLFGVLQAVSNLGYWVLAVTPQHLWTM ALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLSALASIGRVYVGPTSGYLVEAYGWPAFYLMTVAFAFPGLALL WCMRGTIGRYEAEQAERALAAKPTSA >Mature_425_residues TFHDYLDVFRNRRIGAMLLLGFASGLPLALTSGTLQAWMTVEGLDIRTIGLFSLVGQAYIFKFLWAPLMDRFTPPLIGRR RGWLVLTQAGLAASIAAMAFCPPHAALWALAGLAVLVAFLSASQDIVFDAYSTDVLHASERGVGAAVKVLGYRLAMLVSG GLALWLADRVMGWSSMYLLMAGLMALFVLATLWSPEPEAAARPPRSLQEAVVGPLRDFFARRGAWALLALIVLYKLGDAF AGSLSTTFLIRGVGFSAGEVGIVNKTLGLVATIIGALYGGTLMVRLGLVRALLLFGVLQAVSNLGYWVLAVTPQHLWTMA LAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLSALASIGRVYVGPTSGYLVEAYGWPAFYLMTVAFAFPGLALLW CMRGTIGRYEAEQAERALAAKPTSA
Specific function: Probably acts as a permease in the beta-lactamase induction system and in peptidoglycan recycling [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Homo sapiens, GI19923957, Length=407, Percent_Identity=29.4840294840295, Blast_Score=81, Evalue=2e-15, Organism=Escherichia coli, GI1786636, Length=419, Percent_Identity=65.1551312649165, Blast_Score=539, Evalue=1e-154,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004752 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45520; Mature: 45388
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFHDYLDVFRNRRIGAMLLLGFASGLPLALTSGTLQAWMTVEGLDIRTIGLFSLVGQAY CCHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCHHHHEEECCCCCHHHHHHHHHHHHH IFKFLWAPLMDRFTPPLIGRRRGWLVLTQAGLAASIAAMAFCPPHAALWALAGLAVLVAF HHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LSASQDIVFDAYSTDVLHASERGVGAAVKVLGYRLAMLVSGGLALWLADRVMGWSSMYLL HHCCCCEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHH MAGLMALFVLATLWSPEPEAAARPPRSLQEAVVGPLRDFFARRGAWALLALIVLYKLGDA HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FAGSLSTTFLIRGVGFSAGEVGIVNKTLGLVATIIGALYGGTLMVRLGLVRALLLFGVLQ HHCHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVSNLGYWVLAVTPQHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLSA HHHCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH LASIGRVYVGPTSGYLVEAYGWPAFYLMTVAFAFPGLALLWCMRGTIGRYEAEQAERALA HHHHCEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AKPTSA CCCCCC >Mature Secondary Structure TFHDYLDVFRNRRIGAMLLLGFASGLPLALTSGTLQAWMTVEGLDIRTIGLFSLVGQAY CHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCHHHHEEECCCCCHHHHHHHHHHHHH IFKFLWAPLMDRFTPPLIGRRRGWLVLTQAGLAASIAAMAFCPPHAALWALAGLAVLVAF HHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LSASQDIVFDAYSTDVLHASERGVGAAVKVLGYRLAMLVSGGLALWLADRVMGWSSMYLL HHCCCCEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHH MAGLMALFVLATLWSPEPEAAARPPRSLQEAVVGPLRDFFARRGAWALLALIVLYKLGDA HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FAGSLSTTFLIRGVGFSAGEVGIVNKTLGLVATIIGALYGGTLMVRLGLVRALLLFGVLQ HHCHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVSNLGYWVLAVTPQHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLSA HHHCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH LASIGRVYVGPTSGYLVEAYGWPAFYLMTVAFAFPGLALLWCMRGTIGRYEAEQAERALA HHHHCEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AKPTSA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]