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The map label for this gene is 17544835

Identifier: 17544835

GI number: 17544835

Start: 139451

End: 139999

Strand: Direct

Name: 17544835

Synonym: RSc0116

Alternate gene names: NA

Gene position: 139451-139999 (Clockwise)

Preceding gene: 17544833

Following gene: 17544836

Centisome position: 3.75

GC content: 65.03

Gene sequence:

>549_bases
GTGGATCAATATCTCGGCGAAATTCGCTTATGCGCGTTTTCATATCCACCAAAAGGATGGGCGGCATGCAACGGTACACT
GTTGCCGATTGCGCAAAACACAGCGTTGTTTTCGCTGCTGGGCACGCAATATGGCGGCGACGGTGTTCGCACCTTCGCGC
TGCCGGATCTGCGGGGCCGCACCCCCTTGCACCGTGACTACGTCAACTCGGTCGTGGGTAGCGTGGGCGGCGCGGAGACC
GTGACGCTGGTGTCTTCGCAGCTGCCGGTGCACAGCCATCTCTTCAACGCATCGTCCAGCCCGGCCACCTCGACGAACGT
GGGGGCGACGCAGAACCACGTGCTCGCCGCCAGCAACCTCTACAGCTCGACCGATCCCACCATCAGCGGCTCGGGCACCG
CGCTCTATGCCGCGCCCGGCCCCCTGGCCGCGCTGTCCGGCGAGGCCTGCGGCAGCACGGGCGGCGCGCAGCCGCACGAG
AACATGCAGCCGTCGCTGGTGCTGAACTACATCATCGCGCTGACCGGCATTTTCCCGTCGCGCAACTGA

Upstream 100 bases:

>100_bases
GGAATCAAATTGCAGTATCAAACCTGTCGGTGGTAAAAATGCCGGCAGCCGCTGCAAAAAAATCCAATATCGTGGCACCG
CCACATTGCGAGGAGAAGCT

Downstream 100 bases:

>100_bases
GGACGCATCATGGAACCCTTCATCGGCGAGATTCGCCTGTTTGCCGGCAACTATGCCCCGCAGGGCTGGCTGCTGTGCCA
AGGCCAACTGATCGACATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Tail Collar; Phage Tail Collar Domain-Containing Protein; Tail Collar Domain-Containing Protein; Microcystin Dependent Protein; Microcystin-Dependent Protein; Phage Tail Collar Domain Protein; Phage Tail Collar Domain Family; Microcystin Dependent Protein MdpB; Cell Wall/Surface Repeat Protein; Microcystin Dependent; Phenylacrylic Acid Decarboxylase

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MDQYLGEIRLCAFSYPPKGWAACNGTLLPIAQNTALFSLLGTQYGGDGVRTFALPDLRGRTPLHRDYVNSVVGSVGGAET
VTLVSSQLPVHSHLFNASSSPATSTNVGATQNHVLAASNLYSSTDPTISGSGTALYAAPGPLAALSGEACGSTGGAQPHE
NMQPSLVLNYIIALTGIFPSRN

Sequences:

>Translated_182_residues
MDQYLGEIRLCAFSYPPKGWAACNGTLLPIAQNTALFSLLGTQYGGDGVRTFALPDLRGRTPLHRDYVNSVVGSVGGAET
VTLVSSQLPVHSHLFNASSSPATSTNVGATQNHVLAASNLYSSTDPTISGSGTALYAAPGPLAALSGEACGSTGGAQPHE
NMQPSLVLNYIIALTGIFPSRN
>Mature_182_residues
MDQYLGEIRLCAFSYPPKGWAACNGTLLPIAQNTALFSLLGTQYGGDGVRTFALPDLRGRTPLHRDYVNSVVGSVGGAET
VTLVSSQLPVHSHLFNASSSPATSTNVGATQNHVLAASNLYSSTDPTISGSGTALYAAPGPLAALSGEACGSTGGAQPHE
NMQPSLVLNYIIALTGIFPSRN

Specific function: Unknown

COG id: COG4675

COG function: function code S; Microcystin-dependent protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18764; Mature: 18764

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQYLGEIRLCAFSYPPKGWAACNGTLLPIAQNTALFSLLGTQYGGDGVRTFALPDLRGR
CCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCEEEEECCCCCCC
TPLHRDYVNSVVGSVGGAETVTLVSSQLPVHSHLFNASSSPATSTNVGATQNHVLAASNL
CCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEECCC
YSSTDPTISGSGTALYAAPGPLAALSGEACGSTGGAQPHENMQPSLVLNYIIALTGIFPS
CCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
RN
CC
>Mature Secondary Structure
MDQYLGEIRLCAFSYPPKGWAACNGTLLPIAQNTALFSLLGTQYGGDGVRTFALPDLRGR
CCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCEEEEECCCCCCC
TPLHRDYVNSVVGSVGGAETVTLVSSQLPVHSHLFNASSSPATSTNVGATQNHVLAASNL
CCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEECCC
YSSTDPTISGSGTALYAAPGPLAALSGEACGSTGGAQPHENMQPSLVLNYIIALTGIFPS
CCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
RN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA