| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17544830
Identifier: 17544830
GI number: 17544830
Start: 128991
End: 129218
Strand: Reverse
Name: 17544830
Synonym: RSc0111
Alternate gene names: NA
Gene position: 129218-128991 (Counterclockwise)
Preceding gene: 17544831
Following gene: 17544828
Centisome position: 3.48
GC content: 71.49
Gene sequence:
>228_bases ATGACGCTCAACGTCACCCTCAACGACCTGTCGCTCGCGCTGCCCACCGGCAGCACGCTGGCCGACGCCATCGCCTTCGT TACCACGACGGCCGCGCCGCAACTGCAGATCGCGCCGCCGTTCGCCGCGTCCGTCAACGGCGATTTCGTGCCCAAGGCAC GGCACGCGCAGCACGCGCTGCGCAGCGGCGACCGCATCGCGCTGGTGCAGCCCGTCGTGGGCGGCTAG
Upstream 100 bases:
>100_bases CCGCCGCGCACGCGCTGCTGGACGGCCGCGCCATCGATGCCCCCGCGAGCGCGTGGCCCGGACTCTTCGCCGCGCCCGCA TCGCCCGAACCTGTTTTGCC
Downstream 100 bases:
>100_bases TGTCCCGTTCCGCTAATTCGTTCGCAAAGTCTGCTGAGCTTGGAGAGGATTGAATCAGCGGTCGCGGTCCAAGCGAATGG TTTGCAGTTCTGGTTGTAGT
Product: sulfur carrier protein ThiS
Products: NA
Alternate protein names: Sulfur Transfer Protein; Sulfur Carrier Protein ThiS
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MTLNVTLNDLSLALPTGSTLADAIAFVTTTAAPQLQIAPPFAASVNGDFVPKARHAQHALRSGDRIALVQPVVGG
Sequences:
>Translated_75_residues MTLNVTLNDLSLALPTGSTLADAIAFVTTTAAPQLQIAPPFAASVNGDFVPKARHAQHALRSGDRIALVQPVVGG >Mature_74_residues TLNVTLNDLSLALPTGSTLADAIAFVTTTAAPQLQIAPPFAASVNGDFVPKARHAQHALRSGDRIALVQPVVGG
Specific function: Unknown
COG id: COG2104
COG function: function code H; Sulfur transfer protein involved in thiamine biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7677; Mature: 7546
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLNVTLNDLSLALPTGSTLADAIAFVTTTAAPQLQIAPPFAASVNGDFVPKARHAQHAL CEEEEEECCEEEECCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHH RSGDRIALVQPVVGG HCCCEEEEECCCCCC >Mature Secondary Structure TLNVTLNDLSLALPTGSTLADAIAFVTTTAAPQLQIAPPFAASVNGDFVPKARHAQHAL EEEEEECCEEEECCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHH RSGDRIALVQPVVGG HCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA