| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is strK [H]
Identifier: 17544816
GI number: 17544816
Start: 109053
End: 110504
Strand: Direct
Name: strK [H]
Synonym: RSc0097
Alternate gene names: 17544816
Gene position: 109053-110504 (Clockwise)
Preceding gene: 17544815
Following gene: 17544817
Centisome position: 2.93
GC content: 69.7
Gene sequence:
>1452_bases ATGCACCGACTTTCCCTTCTGTCCGTCGCCGCGCTGGCCGCGCTTGCCCTCGTGGCATGCGGCAGCGACGGCACTTCCAC CGGCGTTGCCACGCCGGATGCCGGCGCGATCACCACCGGCCCGACCAGGAACGTGGTGTTCTTCCTCGGCGACGGCATGG GCCTGGCCACCATGACCGCCGCGCGCATCTACAAGGTGGGCGAGGACGGCGAGCTGACCATGGATACGCTGCCCGAGACC GGCTTCGTGCGGACCTTCTCCAACAACGCGCAGGTGACCGACTCCGCGCCGTCGATGTCGGCCTACATGACCGGCGTGAA GATGAACAACGAGGTCATTTCCATGTCGTCGGACACGGCGGCGTTCGATGCGGGCGGCAAGGACTACGTGTCCGGCGCCG ACAGCACCTGCCCGGCCGGCGGCAACGGCAAGCCGGTGACGACGCTGCTGGAGTTGATGAAGGCCGCGGGCTACGGCACG GGCGTGGTCACCACCACGCGCGTCACGCATGCCACGCCGGCGGCCACCTACGCGCACATCTGCCACCGCGACGGCGAGAA CACCATCGCCGCGCAGCTGGTGCCGGCCGGCGCGGGCTACAACGCCGCGCTGGGCGATGGCGTGGACGTGGTGTTCGGCG GCGGCCGCAAGCACTTCCAGCCGTCCGCCGCGGGCGGCGCGCGCACCGACGGCCGCGACCTGGTGGCCGAGCTGAAGGCG GCCGGCTACCGCTACGCCGGCAACAAGGCCGAGTTCGATACGCTGTCGGCCGGCGACAGCAAGGTGGTGGGCCTGTTCAC CAGCAGCCACATGGCCTATGACCTGGACCGCGATGCGGCCAAGGAGCCGAGCCTGGTCGAGATGACCACCAAGGCCATCG ACGTGCTGGCCGCCAAGAAGAAGGGCTTTTTCCTGATGGTGGAAGGCGGCCGCATCGACCACGCGCTGCACGAGACCACG GCGCGCAAGGCCCTGCAGGACACGGTGGCGTTCGATGCCGCCATTCGCGGCGCGCTGGACAAGCTCAGCACGATCGACCC GGGCCTGAAGAACACGCTCGTCGTCGTCACCGCCGACCACGACCACACGCTGGTGCTCAACGGCTACGCCAAGCGCACCG GCCCCACCAGCGACAGCAATCCGGGCGTTCTCGGCCTGCTCAAGAGCTACGTGAACGGCGCCACCGCCACCGACGTGGGC GGCAATCCGTACACCATCCTCGGCTTCGGCACCGGCGAGAACCGCCCGGCCGCGCGCACCGCGCTCACCGACGCGGCCGT CTACGACAAGGCCTACCACCAGGAAGCCGTGATCCCGACGTCGGCGGGCGGCGAGACGCACGGCGGCACCGATGTCTTTG TCGGCGCGCGCGGCCTGGGCGCGGAGCGCTTCACGGGCGTGATGGACAACACCGAGGTCTTCGGCCTCATCAAGCAGGCC GTCGGCCTGTGA
Upstream 100 bases:
>100_bases CCGCGCAGACCTTTCGATCCGGTTAGGAAGCGGCGAACCACCATCACGGTGGTGCCACATGCATTGACCACAGTGGCGCC CATTGCAACGGGAGCCAACG
Downstream 100 bases:
>100_bases CACTCGACGGAACACTGCCATGACCAAGCAATCGAACCGCATCCTCCGCGCCGGCGCGCTCGCGCTGGCGGCGGCCGCAG CGTTGCCCGTGCTCCCGGCC
Product: alkaline phosphatase lipoprotein transmembrane
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MHRLSLLSVAALAALALVACGSDGTSTGVATPDAGAITTGPTRNVVFFLGDGMGLATMTAARIYKVGEDGELTMDTLPET GFVRTFSNNAQVTDSAPSMSAYMTGVKMNNEVISMSSDTAAFDAGGKDYVSGADSTCPAGGNGKPVTTLLELMKAAGYGT GVVTTTRVTHATPAATYAHICHRDGENTIAAQLVPAGAGYNAALGDGVDVVFGGGRKHFQPSAAGGARTDGRDLVAELKA AGYRYAGNKAEFDTLSAGDSKVVGLFTSSHMAYDLDRDAAKEPSLVEMTTKAIDVLAAKKKGFFLMVEGGRIDHALHETT ARKALQDTVAFDAAIRGALDKLSTIDPGLKNTLVVVTADHDHTLVLNGYAKRTGPTSDSNPGVLGLLKSYVNGATATDVG GNPYTILGFGTGENRPAARTALTDAAVYDKAYHQEAVIPTSAGGETHGGTDVFVGARGLGAERFTGVMDNTEVFGLIKQA VGL
Sequences:
>Translated_483_residues MHRLSLLSVAALAALALVACGSDGTSTGVATPDAGAITTGPTRNVVFFLGDGMGLATMTAARIYKVGEDGELTMDTLPET GFVRTFSNNAQVTDSAPSMSAYMTGVKMNNEVISMSSDTAAFDAGGKDYVSGADSTCPAGGNGKPVTTLLELMKAAGYGT GVVTTTRVTHATPAATYAHICHRDGENTIAAQLVPAGAGYNAALGDGVDVVFGGGRKHFQPSAAGGARTDGRDLVAELKA AGYRYAGNKAEFDTLSAGDSKVVGLFTSSHMAYDLDRDAAKEPSLVEMTTKAIDVLAAKKKGFFLMVEGGRIDHALHETT ARKALQDTVAFDAAIRGALDKLSTIDPGLKNTLVVVTADHDHTLVLNGYAKRTGPTSDSNPGVLGLLKSYVNGATATDVG GNPYTILGFGTGENRPAARTALTDAAVYDKAYHQEAVIPTSAGGETHGGTDVFVGARGLGAERFTGVMDNTEVFGLIKQA VGL >Mature_483_residues MHRLSLLSVAALAALALVACGSDGTSTGVATPDAGAITTGPTRNVVFFLGDGMGLATMTAARIYKVGEDGELTMDTLPET GFVRTFSNNAQVTDSAPSMSAYMTGVKMNNEVISMSSDTAAFDAGGKDYVSGADSTCPAGGNGKPVTTLLELMKAAGYGT GVVTTTRVTHATPAATYAHICHRDGENTIAAQLVPAGAGYNAALGDGVDVVFGGGRKHFQPSAAGGARTDGRDLVAELKA AGYRYAGNKAEFDTLSAGDSKVVGLFTSSHMAYDLDRDAAKEPSLVEMTTKAIDVLAAKKKGFFLMVEGGRIDHALHETT ARKALQDTVAFDAAIRGALDKLSTIDPGLKNTLVVVTADHDHTLVLNGYAKRTGPTSDSNPGVLGLLKSYVNGATATDVG GNPYTILGFGTGENRPAARTALTDAAVYDKAYHQEAVIPTSAGGETHGGTDVFVGARGLGAERFTGVMDNTEVFGLIKQA VGL
Specific function: Specifically cleaves both streptomycin-6-phosphate and, more slowly, streptomycin-3''-phosphate during the biosynthesis of streptomycin [H]
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI116734717, Length=469, Percent_Identity=35.6076759061834, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI157266296, Length=463, Percent_Identity=35.6371490280778, Blast_Score=228, Evalue=7e-60, Organism=Homo sapiens, GI94721246, Length=461, Percent_Identity=35.5748373101952, Blast_Score=225, Evalue=6e-59, Organism=Homo sapiens, GI294660770, Length=459, Percent_Identity=35.9477124183007, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI157266292, Length=469, Percent_Identity=34.5415778251599, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI294660772, Length=415, Percent_Identity=34.6987951807229, Blast_Score=189, Evalue=4e-48, Organism=Escherichia coli, GI48994877, Length=497, Percent_Identity=27.5653923541247, Blast_Score=139, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6320689, Length=358, Percent_Identity=34.3575418994413, Blast_Score=163, Evalue=6e-41, Organism=Drosophila melanogaster, GI85725200, Length=464, Percent_Identity=35.7758620689655, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI85815833, Length=464, Percent_Identity=35.7758620689655, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI19921912, Length=485, Percent_Identity=34.639175257732, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI21355151, Length=465, Percent_Identity=34.8387096774194, Blast_Score=225, Evalue=5e-59, Organism=Drosophila melanogaster, GI24585213, Length=486, Percent_Identity=33.7448559670782, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI21358067, Length=479, Percent_Identity=35.0730688935282, Blast_Score=214, Evalue=7e-56, Organism=Drosophila melanogaster, GI18859923, Length=443, Percent_Identity=34.5372460496614, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI21355981, Length=463, Percent_Identity=35.85313174946, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI21355149, Length=473, Percent_Identity=31.0782241014799, Blast_Score=198, Evalue=8e-51, Organism=Drosophila melanogaster, GI24651554, Length=490, Percent_Identity=33.8775510204082, Blast_Score=195, Evalue=5e-50, Organism=Drosophila melanogaster, GI24657827, Length=477, Percent_Identity=33.7526205450734, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI24657842, Length=473, Percent_Identity=32.9809725158562, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI24657835, Length=474, Percent_Identity=32.0675105485232, Blast_Score=184, Evalue=9e-47, Organism=Drosophila melanogaster, GI24651556, Length=480, Percent_Identity=33.3333333333333, Blast_Score=178, Evalue=9e-45,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.39 [H]
Molecular weight: Translated: 49601; Mature: 49601
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRLSLLSVAALAALALVACGSDGTSTGVATPDAGAITTGPTRNVVFFLGDGMGLATMTA CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCEEEEEECCCCHHHHHH ARIYKVGEDGELTMDTLPETGFVRTFSNNAQVTDSAPSMSAYMTGVKMNNEVISMSSDTA HHHEEECCCCCEEHCCCCCCCEEEEECCCCEEECCCCCCCHHEEEEEECCEEEEECCCCC AFDAGGKDYVSGADSTCPAGGNGKPVTTLLELMKAAGYGTGVVTTTRVTHATPAATYAHI EECCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHH CHRDGENTIAAQLVPAGAGYNAALGDGVDVVFGGGRKHFQPSAAGGARTDGRDLVAELKA HHCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH AGYRYAGNKAEFDTLSAGDSKVVGLFTSSHMAYDLDRDAAKEPSLVEMTTKAIDVLAAKK CCEEECCCCCCCCEECCCCCEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCC KGFFLMVEGGRIDHALHETTARKALQDTVAFDAAIRGALDKLSTIDPGLKNTLVVVTADH CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC DHTLVLNGYAKRTGPTSDSNPGVLGLLKSYVNGATATDVGGNPYTILGFGTGENRPAART CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCCCHHHH ALTDAAVYDKAYHQEAVIPTSAGGETHGGTDVFVGARGLGAERFTGVMDNTEVFGLIKQA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHH VGL HCC >Mature Secondary Structure MHRLSLLSVAALAALALVACGSDGTSTGVATPDAGAITTGPTRNVVFFLGDGMGLATMTA CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCEEEEEECCCCHHHHHH ARIYKVGEDGELTMDTLPETGFVRTFSNNAQVTDSAPSMSAYMTGVKMNNEVISMSSDTA HHHEEECCCCCEEHCCCCCCCEEEEECCCCEEECCCCCCCHHEEEEEECCEEEEECCCCC AFDAGGKDYVSGADSTCPAGGNGKPVTTLLELMKAAGYGTGVVTTTRVTHATPAATYAHI EECCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHH CHRDGENTIAAQLVPAGAGYNAALGDGVDVVFGGGRKHFQPSAAGGARTDGRDLVAELKA HHCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH AGYRYAGNKAEFDTLSAGDSKVVGLFTSSHMAYDLDRDAAKEPSLVEMTTKAIDVLAAKK CCEEECCCCCCCCEECCCCCEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCC KGFFLMVEGGRIDHALHETTARKALQDTVAFDAAIRGALDKLSTIDPGLKNTLVVVTADH CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC DHTLVLNGYAKRTGPTSDSNPGVLGLLKSYVNGATATDVGGNPYTILGFGTGENRPAART CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCCCHHHH ALTDAAVYDKAYHQEAVIPTSAGGETHGGTDVFVGARGLGAERFTGVMDNTEVFGLIKQA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHH VGL HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1654502 [H]