| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17544795
Identifier: 17544795
GI number: 17544795
Start: 86708
End: 87478
Strand: Direct
Name: 17544795
Synonym: RSc0076
Alternate gene names: NA
Gene position: 86708-87478 (Clockwise)
Preceding gene: 17544794
Following gene: 17544796
Centisome position: 2.33
GC content: 69.39
Gene sequence:
>771_bases GTGCCCCGGTTCCGGCAAGTTCTGCATCGGCTGGTCGTGCTGGGCATGCTGTGCCTGTGGTGGCCGGCCGCGGCGCCGGC GCAGACCATCGAAGTCGGGCGCACGCAGCTGGAATACGCCGACGGGGGCTGGAACCTCTCCGCCGATTTCGATTTCGATC TGCCGGGCAACCTCGAAGATGCCGTCAACAAGGGCATCGCGCTGTATTTCCTCGTCGAGTTCGAACTGATCCGTCCGCGC TGGTACTGGTTCGACGACCACGCCGTCAGCGCGACCCGTGTGGTGCGGCTGTCGTACCACCCGCTCACGCGCCAGTACCG GGTCTCGACCGGTGGTCTGCAGGTGCCGTTCTCGCGGCTGAAGGACGCGGTCGACTTCATGCAGCACGTGCGGGGCTGGC GCGTGTTCGAGCAGCGCGCGGTCAAGGCCGGCGAGGCGGTGCAGGCCGAAGTCCGCATGCGCCTGGATGTGTCCCAACTG CCCAAGCCGTTCCAGATCAACGCCGTCAACACGCGCGACTGGAATCTCGGCTCCGACTGGAAGCGCTTTTCGTTCGTGGT GCCCAACGAACCGGTGCCGCCCGCACAGCCGCCCGCGCCGCCCGCGCCGCCGGCGCAGTTGCCCACGAGCGCGCCGCCTG CTGGTCCGGCGCCGAACCCGGCCCCCTCTCCCGCGTCCGGCACGCTGGGCCTGTCGCCCAATCCGGGCTGGGGCATGGGC GCGGGGTCGGGCAACAATGCGGCATCGCTGCTGCTGGCCCCAGCCAAATGA
Upstream 100 bases:
>100_bases CTCGACCACGACGGCTTCTATTACGCGGTGTTCCAGAAACGGCCCTGATGCGACGACCGTTGTGACTGCACTCCTTCGCC CATCGACCTGGCTGCCGGCG
Downstream 100 bases:
>100_bases TCTTCGATCGCAGCTACAAGCGCCTGCTGTACCAGGTGGTGGCCGGCACCATCGTCTTCCTGGCGATCGTGCTGGTCGGC CTGCTGGCGGCCGCCTCGGC
Product: proline rich signal peptide protein
Products: NA
Alternate protein names: Exported Protein
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MPRFRQVLHRLVVLGMLCLWWPAAAPAQTIEVGRTQLEYADGGWNLSADFDFDLPGNLEDAVNKGIALYFLVEFELIRPR WYWFDDHAVSATRVVRLSYHPLTRQYRVSTGGLQVPFSRLKDAVDFMQHVRGWRVFEQRAVKAGEAVQAEVRMRLDVSQL PKPFQINAVNTRDWNLGSDWKRFSFVVPNEPVPPAQPPAPPAPPAQLPTSAPPAGPAPNPAPSPASGTLGLSPNPGWGMG AGSGNNAASLLLAPAK
Sequences:
>Translated_256_residues MPRFRQVLHRLVVLGMLCLWWPAAAPAQTIEVGRTQLEYADGGWNLSADFDFDLPGNLEDAVNKGIALYFLVEFELIRPR WYWFDDHAVSATRVVRLSYHPLTRQYRVSTGGLQVPFSRLKDAVDFMQHVRGWRVFEQRAVKAGEAVQAEVRMRLDVSQL PKPFQINAVNTRDWNLGSDWKRFSFVVPNEPVPPAQPPAPPAPPAQLPTSAPPAGPAPNPAPSPASGTLGLSPNPGWGMG AGSGNNAASLLLAPAK >Mature_255_residues PRFRQVLHRLVVLGMLCLWWPAAAPAQTIEVGRTQLEYADGGWNLSADFDFDLPGNLEDAVNKGIALYFLVEFELIRPRW YWFDDHAVSATRVVRLSYHPLTRQYRVSTGGLQVPFSRLKDAVDFMQHVRGWRVFEQRAVKAGEAVQAEVRMRLDVSQLP KPFQINAVNTRDWNLGSDWKRFSFVVPNEPVPPAQPPAPPAPPAQLPTSAPPAGPAPNPAPSPASGTLGLSPNPGWGMGA GSGNNAASLLLAPAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28120; Mature: 27989
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRFRQVLHRLVVLGMLCLWWPAAAPAQTIEVGRTQLEYADGGWNLSADFDFDLPGNLED CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECCCCCEECCCCCCCCCCCHHH AVNKGIALYFLVEFELIRPRWYWFDDHAVSATRVVRLSYHPLTRQYRVSTGGLQVPFSRL HHHCCEEEEEEEEEEEECCEEEEECCCCCCEEEEEEEECCCCCCEEEECCCCEECCHHHH KDAVDFMQHVRGWRVFEQRAVKAGEAVQAEVRMRLDVSQLPKPFQINAVNTRDWNLGSDW HHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHEEECHHHCCCCEEEEEECCCCCCCCCCC KRFSFVVPNEPVPPAQPPAPPAPPAQLPTSAPPAGPAPNPAPSPASGTLGLSPNPGWGMG CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC AGSGNNAASLLLAPAK CCCCCCCEEEEEECCC >Mature Secondary Structure PRFRQVLHRLVVLGMLCLWWPAAAPAQTIEVGRTQLEYADGGWNLSADFDFDLPGNLED CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECCCCCEECCCCCCCCCCCHHH AVNKGIALYFLVEFELIRPRWYWFDDHAVSATRVVRLSYHPLTRQYRVSTGGLQVPFSRL HHHCCEEEEEEEEEEEECCEEEEECCCCCCEEEEEEEECCCCCCEEEECCCCEECCHHHH KDAVDFMQHVRGWRVFEQRAVKAGEAVQAEVRMRLDVSQLPKPFQINAVNTRDWNLGSDW HHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHEEECHHHCCCCEEEEEECCCCCCCCCCC KRFSFVVPNEPVPPAQPPAPPAPPAQLPTSAPPAGPAPNPAPSPASGTLGLSPNPGWGMG CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC AGSGNNAASLLLAPAK CCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA