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The map label for this gene is ykgB [H]

Identifier: 17544768

GI number: 17544768

Start: 53181

End: 54437

Strand: Reverse

Name: ykgB [H]

Synonym: RSc0049

Alternate gene names: 17544768

Gene position: 54437-53181 (Counterclockwise)

Preceding gene: 17544769

Following gene: 17544767

Centisome position: 1.46

GC content: 72.16

Gene sequence:

>1257_bases
ATGACCCGTTTCAACCGCTTTCGCAGAACCCTCATGCAGTGGACCGGTAGCCTGCCCTTGCTGGGCGCATTGCCTCTTTC
CAAGCTTGCCCAGGCGCAGGGCGCCGAGCAGCCCGCCGCCTCTGGCACGCCGCCGGCCGGCGGCACGCGAGCGCCGCGCT
TCGCCTATGTCGGCACCTATACGTTCGACGCGCCGGGCGGCACGGCGGGCGGGCCACCCGCGCGCGGCATCTACGTGCTG
GCGCCGCGCGGCGATGCCTGGTCGCAGGCGCAGGTGGTGGAGAGCGCCAACCCGTCGTTCCTGGCGGTGCACCCGAATCA
GCGCTGCCTGTACGCCATCAACGAGATCGATGTCTACGAAGGCCGCGCCACCGGCACCGCCGAGGCCTATGCCATCGACC
CGCGCGACGGCCGGCTGACGCTGCTGAACCGGCAGCCGCTGTCGCTGTCGGGCACGATTCCCGCGCACGTGGCGGTGTCG
CCGGACGGGCAGCACCTGGCCGTGGCACTGTACGGCGGCGGCGCGTACAACGTGCTGCCGATCGGCGCGGACGGCAGGCT
GGGCAGCGTCTCGGGCCTGTTCAAGGACACCGGCTCCGGGCCCGACACCGCGCGCCAGGAGGCGCCGCACGCCCACATGG
TGCTGTTCGACCCGACCGGCCGGCACATCCTGGGCACGGATCTCGGCACCGACCGCATCAACGTGTTCGCGCTGGAAGAC
GGCAAGCTGACGCCGCGCGACCGCGCCCAGCTCAAGCCCGGCGGCGGCCCGCGCCACCTGGCGCTGCATCCGTCCGGCAA
GCTGCTCTACGTCATCAGCGAACTGGACAGCACCGTGGCCTGCCACGGCTACGACCCCGCCACGGGGCGCGTGCTGGACG
AGCGCCAGCGCATCGCCACCACGCCGGCCGACTACACCGGGCAGAAGAGCGGCGCGGCGCTGGTGATGCACCCGTCGGGG
CGCTTCCTGTATGCCTCCAACCGGCGGCTGAAATCGGAGCACCCGCTGGCCGACAGCATCGCCGCGTTCAGCATCGACCC
GGCCTCCGGCAGGCTCGCCGCCCTCCAGTACTGGAGCGAGGGCCTGCGCTTCCCGCGCGCGCTGACCATGGCGGACGACG
GCCGCCACCTCTACGCGCTGAGCCAGAAGGGCGACACGATCCTGCGCCTGCGCATCGACGACGCCACCGGCAGGCTGGAT
CAGCCGGCCGTGGTCTCCAACGTGCCGACGCCGGTGTGCCTGGTGTTCGCCGGCTAG

Upstream 100 bases:

>100_bases
CGGCGATCTCTATGCGTTCCTGCAACGCGTCAAGCGCCGTTATGATCCGAACAACATCTTCCACCACGCGATGTCCGTGC
GTCCGTGAGGAGGAACGACG

Downstream 100 bases:

>100_bases
CCGGACATCGGGCACATCCGGGACGGCACGACGCCGCCCAGTTGCAACTGAATTGCGGCAGGAGCGCAGGGCTGGGTACA
ATGGTCGGATGAACAGCCCG

Product: hemaggltinin-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MTRFNRFRRTLMQWTGSLPLLGALPLSKLAQAQGAEQPAASGTPPAGGTRAPRFAYVGTYTFDAPGGTAGGPPARGIYVL
APRGDAWSQAQVVESANPSFLAVHPNQRCLYAINEIDVYEGRATGTAEAYAIDPRDGRLTLLNRQPLSLSGTIPAHVAVS
PDGQHLAVALYGGGAYNVLPIGADGRLGSVSGLFKDTGSGPDTARQEAPHAHMVLFDPTGRHILGTDLGTDRINVFALED
GKLTPRDRAQLKPGGGPRHLALHPSGKLLYVISELDSTVACHGYDPATGRVLDERQRIATTPADYTGQKSGAALVMHPSG
RFLYASNRRLKSEHPLADSIAAFSIDPASGRLAALQYWSEGLRFPRALTMADDGRHLYALSQKGDTILRLRIDDATGRLD
QPAVVSNVPTPVCLVFAG

Sequences:

>Translated_418_residues
MTRFNRFRRTLMQWTGSLPLLGALPLSKLAQAQGAEQPAASGTPPAGGTRAPRFAYVGTYTFDAPGGTAGGPPARGIYVL
APRGDAWSQAQVVESANPSFLAVHPNQRCLYAINEIDVYEGRATGTAEAYAIDPRDGRLTLLNRQPLSLSGTIPAHVAVS
PDGQHLAVALYGGGAYNVLPIGADGRLGSVSGLFKDTGSGPDTARQEAPHAHMVLFDPTGRHILGTDLGTDRINVFALED
GKLTPRDRAQLKPGGGPRHLALHPSGKLLYVISELDSTVACHGYDPATGRVLDERQRIATTPADYTGQKSGAALVMHPSG
RFLYASNRRLKSEHPLADSIAAFSIDPASGRLAALQYWSEGLRFPRALTMADDGRHLYALSQKGDTILRLRIDDATGRLD
QPAVVSNVPTPVCLVFAG
>Mature_417_residues
TRFNRFRRTLMQWTGSLPLLGALPLSKLAQAQGAEQPAASGTPPAGGTRAPRFAYVGTYTFDAPGGTAGGPPARGIYVLA
PRGDAWSQAQVVESANPSFLAVHPNQRCLYAINEIDVYEGRATGTAEAYAIDPRDGRLTLLNRQPLSLSGTIPAHVAVSP
DGQHLAVALYGGGAYNVLPIGADGRLGSVSGLFKDTGSGPDTARQEAPHAHMVLFDPTGRHILGTDLGTDRINVFALEDG
KLTPRDRAQLKPGGGPRHLALHPSGKLLYVISELDSTVACHGYDPATGRVLDERQRIATTPADYTGQKSGAALVMHPSGR
FLYASNRRLKSEHPLADSIAAFSIDPASGRLAALQYWSEGLRFPRALTMADDGRHLYALSQKGDTILRLRIDDATGRLDQ
PAVVSNVPTPVCLVFAG

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=310, Percent_Identity=25.8064516129032, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 44382; Mature: 44250

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRFNRFRRTLMQWTGSLPLLGALPLSKLAQAQGAEQPAASGTPPAGGTRAPRFAYVGTY
CCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEE
TFDAPGGTAGGPPARGIYVLAPRGDAWSQAQVVESANPSFLAVHPNQRCLYAINEIDVYE
EECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCEEEECCCCCEEEEEEEEEEEC
GRATGTAEAYAIDPRDGRLTLLNRQPLSLSGTIPAHVAVSPDGQHLAVALYGGGAYNVLP
CCCCCCEEEEEECCCCCEEEEEECCCCEECCCCCEEEEECCCCCEEEEEEECCCCEEEEE
IGADGRLGSVSGLFKDTGSGPDTARQEAPHAHMVLFDPTGRHILGTDLGTDRINVFALED
ECCCCCCCCCCHHHHCCCCCCCCHHHCCCCEEEEEECCCCCEEEECCCCCCEEEEEEEEC
GKLTPRDRAQLKPGGGPRHLALHPSGKLLYVISELDSTVACHGYDPATGRVLDERQRIAT
CCCCCCCCCEECCCCCCCEEEECCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHCC
TPADYTGQKSGAALVMHPSGRFLYASNRRLKSEHPLADSIAAFSIDPASGRLAALQYWSE
CCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEHHHHHHH
GLRFPRALTMADDGRHLYALSQKGDTILRLRIDDATGRLDQPAVVSNVPTPVCLVFAG
HCCCCEEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCCCCHHHCCCCCCEEEEEEC
>Mature Secondary Structure 
TRFNRFRRTLMQWTGSLPLLGALPLSKLAQAQGAEQPAASGTPPAGGTRAPRFAYVGTY
CHHHHHHHHHHHHCCCCCEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEE
TFDAPGGTAGGPPARGIYVLAPRGDAWSQAQVVESANPSFLAVHPNQRCLYAINEIDVYE
EECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCEEEECCCCCEEEEEEEEEEEC
GRATGTAEAYAIDPRDGRLTLLNRQPLSLSGTIPAHVAVSPDGQHLAVALYGGGAYNVLP
CCCCCCEEEEEECCCCCEEEEEECCCCEECCCCCEEEEECCCCCEEEEEEECCCCEEEEE
IGADGRLGSVSGLFKDTGSGPDTARQEAPHAHMVLFDPTGRHILGTDLGTDRINVFALED
ECCCCCCCCCCHHHHCCCCCCCCHHHCCCCEEEEEECCCCCEEEECCCCCCEEEEEEEEC
GKLTPRDRAQLKPGGGPRHLALHPSGKLLYVISELDSTVACHGYDPATGRVLDERQRIAT
CCCCCCCCCEECCCCCCCEEEECCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHCC
TPADYTGQKSGAALVMHPSGRFLYASNRRLKSEHPLADSIAAFSIDPASGRLAALQYWSE
CCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEHHHHHHH
GLRFPRALTMADDGRHLYALSQKGDTILRLRIDDATGRLDQPAVVSNVPTPVCLVFAG
HCCCCEEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCCCCHHHCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]