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The map label for this gene is ygaK [H]

Identifier: 17544769

GI number: 17544769

Start: 54450

End: 55976

Strand: Reverse

Name: ygaK [H]

Synonym: RSc0050

Alternate gene names: 17544769

Gene position: 55976-54450 (Counterclockwise)

Preceding gene: 17544770

Following gene: 17544768

Centisome position: 1.51

GC content: 69.35

Gene sequence:

>1527_bases
ATGACGCTCGATGTGACCCGCCAGGATCCCCGCTACGACACGCTCCGGCACGGCTTCAACCTGCGCTGGCCATCGAGCGA
CGCGCAGGCCGCCGGCCGCATCGCCCTGTGCGAGAAGACCGACGAGGTGGCGCCCGCGCTCCAGCGCATCATCGACACGG
GCATGCGCCCCACGGTGCGCAGCGGCGGCCATTGCTACGAAGACTTCGTCAGCAACAACCCCGGCGGCGTGATCGTCGAC
CTCAGCCTGCTGAATGCGCCCGAGGTCCGCGCCGACGGCGCCGTGCGCGTCCCCGCCGGCATGCAGAACTGGAACGGCGC
GCTCGAGCTCTACAAGCGCCACGGCGTGACGCTGCCGGGCGGCTCGTGCTATTCGGTGGGCGCGGGCGGGCACATCAGCG
GCGGCGGCTACGGGCTGCTGTCGCGCCTGCAGGGCCTGACGGTGGATTGGCTGAGCGCCGTCGACATCGTCACCGTCGAC
AAGCAGGGCAGGGCCGCGCCGCGCACGGTCGACGCGGCGCGCGATCCGGACCTGTTCCGCGCCTGCCGCGGCGCGGGCGG
CGGCAACTTCGGCATCATCACCAGCTATACCTTCGCCAGGCTGCCCGAGGCACCGCGCGAAGTCGCCCTCGCCACCGTGG
CCTTCGACTGGGCCGCCATGACGCCCGAGCGCTTCGCCGAACTGCTGCGCCTCTACGGCGACTACTGGGCGACACGCGGC
AAGGACCCGGACACGTGGGGCCTGTTCTCCCTGCTCAAGCTGACGCACAAGTCCGCCGGGCAGATCGTGATGCTCACGCA
GTTCTGCAACCCCGACGGCACCTGCCGCGACCTCTCTGTCCTCAACGATTTCCTGGCCCGCTTCCAGGTCTGCGCGCCGG
TGCCGGCCAGGGCGCGCCCGCCGGGTTATGGCCCCGCGCACCGGCAGGGCGTGGGGCAGCTGCTCTGCTCCAAGCCGCAC
ACCGTCGTCCAGTACGACTGGCTGACCGCCACGCAGTCTCTGAACGGCTCGGGCCCGAACCAGCGCGGCAAGTACAAGTC
GGCCTACATGAAGCGCGGCTTCACGGCGCGCGAGGCGCAGCGCATCTACACGCATCTCACGCGCACCGTGCAGGGCATCG
ACCTGAGCCAATCGCTGCTGCAGGTCGACTCGTACGGCGGCGCCGTCAACAAGGCCGAGCGCATCGCCGACACGGCCGTG
CCCCAGCGCGCTTCCGTCATGAAGCTGCAGTACCAGACCTACTGGACATCGGCCGCGGACGACGCCGGCCACCTGCGTTG
GATCGGCGACTTCTACCGCGACGTCTACGGCACGCCCGACGTGAGCGCGCCGCATGCCGGCACGCCATACCCCGGCGACC
GGTACGAGGGCTGCTACATCAACTACCCCGACGTCGACATGCTGGCCTATCCGTTCTGGCCGCAGCTCTATTACGGCGAC
GGCGATCTCTATGCGTTCCTGCAACGCGTCAAGCGCCGTTATGATCCGAACAACATCTTCCACCACGCGATGTCCGTGCG
TCCGTGA

Upstream 100 bases:

>100_bases
GAGCGACTAAGTTGGAACCTCCGGGCCCGCGCCGCCGGCGTGCGGCCCGACCCCAACTCCGTTTGCGCAACGCTTGCGCA
AACCCGACCGGGAGTCGCCG

Downstream 100 bases:

>100_bases
GGAGGAACGACGATGACCCGTTTCAACCGCTTTCGCAGAACCCTCATGCAGTGGACCGGTAGCCTGCCCTTGCTGGGCGC
ATTGCCTCTTTCCAAGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 507

Protein sequence:

>508_residues
MTLDVTRQDPRYDTLRHGFNLRWPSSDAQAAGRIALCEKTDEVAPALQRIIDTGMRPTVRSGGHCYEDFVSNNPGGVIVD
LSLLNAPEVRADGAVRVPAGMQNWNGALELYKRHGVTLPGGSCYSVGAGGHISGGGYGLLSRLQGLTVDWLSAVDIVTVD
KQGRAAPRTVDAARDPDLFRACRGAGGGNFGIITSYTFARLPEAPREVALATVAFDWAAMTPERFAELLRLYGDYWATRG
KDPDTWGLFSLLKLTHKSAGQIVMLTQFCNPDGTCRDLSVLNDFLARFQVCAPVPARARPPGYGPAHRQGVGQLLCSKPH
TVVQYDWLTATQSLNGSGPNQRGKYKSAYMKRGFTAREAQRIYTHLTRTVQGIDLSQSLLQVDSYGGAVNKAERIADTAV
PQRASVMKLQYQTYWTSAADDAGHLRWIGDFYRDVYGTPDVSAPHAGTPYPGDRYEGCYINYPDVDMLAYPFWPQLYYGD
GDLYAFLQRVKRRYDPNNIFHHAMSVRP

Sequences:

>Translated_508_residues
MTLDVTRQDPRYDTLRHGFNLRWPSSDAQAAGRIALCEKTDEVAPALQRIIDTGMRPTVRSGGHCYEDFVSNNPGGVIVD
LSLLNAPEVRADGAVRVPAGMQNWNGALELYKRHGVTLPGGSCYSVGAGGHISGGGYGLLSRLQGLTVDWLSAVDIVTVD
KQGRAAPRTVDAARDPDLFRACRGAGGGNFGIITSYTFARLPEAPREVALATVAFDWAAMTPERFAELLRLYGDYWATRG
KDPDTWGLFSLLKLTHKSAGQIVMLTQFCNPDGTCRDLSVLNDFLARFQVCAPVPARARPPGYGPAHRQGVGQLLCSKPH
TVVQYDWLTATQSLNGSGPNQRGKYKSAYMKRGFTAREAQRIYTHLTRTVQGIDLSQSLLQVDSYGGAVNKAERIADTAV
PQRASVMKLQYQTYWTSAADDAGHLRWIGDFYRDVYGTPDVSAPHAGTPYPGDRYEGCYINYPDVDMLAYPFWPQLYYGD
GDLYAFLQRVKRRYDPNNIFHHAMSVRP
>Mature_507_residues
TLDVTRQDPRYDTLRHGFNLRWPSSDAQAAGRIALCEKTDEVAPALQRIIDTGMRPTVRSGGHCYEDFVSNNPGGVIVDL
SLLNAPEVRADGAVRVPAGMQNWNGALELYKRHGVTLPGGSCYSVGAGGHISGGGYGLLSRLQGLTVDWLSAVDIVTVDK
QGRAAPRTVDAARDPDLFRACRGAGGGNFGIITSYTFARLPEAPREVALATVAFDWAAMTPERFAELLRLYGDYWATRGK
DPDTWGLFSLLKLTHKSAGQIVMLTQFCNPDGTCRDLSVLNDFLARFQVCAPVPARARPPGYGPAHRQGVGQLLCSKPHT
VVQYDWLTATQSLNGSGPNQRGKYKSAYMKRGFTAREAQRIYTHLTRTVQGIDLSQSLLQVDSYGGAVNKAERIADTAVP
QRASVMKLQYQTYWTSAADDAGHLRWIGDFYRDVYGTPDVSAPHAGTPYPGDRYEGCYINYPDVDMLAYPFWPQLYYGDG
DLYAFLQRVKRRYDPNNIFHHAMSVRP

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 56032; Mature: 55901

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDVTRQDPRYDTLRHGFNLRWPSSDAQAAGRIALCEKTDEVAPALQRIIDTGMRPTVR
CCCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCCEEEECCHHHHHHHHHHHHHCCCCCCCC
SGGHCYEDFVSNNPGGVIVDLSLLNAPEVRADGAVRVPAGMQNWNGALELYKRHGVTLPG
CCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCC
GSCYSVGAGGHISGGGYGLLSRLQGLTVDWLSAVDIVTVDKQGRAAPRTVDAARDPDLFR
CCEEECCCCCCCCCCHHHHHHHHCCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHH
ACRGAGGGNFGIITSYTFARLPEAPREVALATVAFDWAAMTPERFAELLRLYGDYWATRG
HHHCCCCCCCEEEECHHHHHCCCCCHHHEEHHEEHHHHHCCHHHHHHHHHHHHHHHHCCC
KDPDTWGLFSLLKLTHKSAGQIVMLTQFCNPDGTCRDLSVLNDFLARFQVCAPVPARARP
CCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PGYGPAHRQGVGQLLCSKPHTVVQYDWLTATQSLNGSGPNQRGKYKSAYMKRGFTAREAQ
CCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHH
RIYTHLTRTVQGIDLSQSLLQVDSYGGAVNKAERIADTAVPQRASVMKLQYQTYWTSAAD
HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHEEEEEHHHCCCCCC
DAGHLRWIGDFYRDVYGTPDVSAPHAGTPYPGDRYEGCYINYPDVDMLAYPFWPQLYYGD
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHEECCCCCEEEECC
GDLYAFLQRVKRRYDPNNIFHHAMSVRP
CHHHHHHHHHHHHCCCHHHHHHHHCCCC
>Mature Secondary Structure 
TLDVTRQDPRYDTLRHGFNLRWPSSDAQAAGRIALCEKTDEVAPALQRIIDTGMRPTVR
CCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCCEEEECCHHHHHHHHHHHHHCCCCCCCC
SGGHCYEDFVSNNPGGVIVDLSLLNAPEVRADGAVRVPAGMQNWNGALELYKRHGVTLPG
CCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCC
GSCYSVGAGGHISGGGYGLLSRLQGLTVDWLSAVDIVTVDKQGRAAPRTVDAARDPDLFR
CCEEECCCCCCCCCCHHHHHHHHCCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHH
ACRGAGGGNFGIITSYTFARLPEAPREVALATVAFDWAAMTPERFAELLRLYGDYWATRG
HHHCCCCCCCEEEECHHHHHCCCCCHHHEEHHEEHHHHHCCHHHHHHHHHHHHHHHHCCC
KDPDTWGLFSLLKLTHKSAGQIVMLTQFCNPDGTCRDLSVLNDFLARFQVCAPVPARARP
CCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PGYGPAHRQGVGQLLCSKPHTVVQYDWLTATQSLNGSGPNQRGKYKSAYMKRGFTAREAQ
CCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHH
RIYTHLTRTVQGIDLSQSLLQVDSYGGAVNKAERIADTAVPQRASVMKLQYQTYWTSAAD
HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHEEEEEHHHCCCCCC
DAGHLRWIGDFYRDVYGTPDVSAPHAGTPYPGDRYEGCYINYPDVDMLAYPFWPQLYYGD
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHEECCCCCEEEECC
GDLYAFLQRVKRRYDPNNIFHHAMSVRP
CHHHHHHHHHHHHCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]