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The map label for this gene is yjiA [C]

Identifier: 17544764

GI number: 17544764

Start: 49301

End: 50575

Strand: Reverse

Name: yjiA [C]

Synonym: RSc0045

Alternate gene names: 17544764

Gene position: 50575-49301 (Counterclockwise)

Preceding gene: 17544765

Following gene: 17544763

Centisome position: 1.36

GC content: 70.98

Gene sequence:

>1275_bases
GTGCTGTCCGGCTTCCTCGGCGCCGGCAAGACCACGCTGCTCAACCACGTGCTCGCCAACCGCGAGGGCAAGCGCGTGGC
CGTGATCGTCAACGACCTGTCGGACGTCAACATCGACGCGCAGCTCGTGGGCGACGGCACCGCCACGAGCGCCCAGCTCT
CGCGCACCGATGAGCGCATGGTGGAGCTGTCCAACGGCTGCATCTGCTGCACGCTGCGCGAGGACCTGCTCGACGAGATC
GCCCGCCTGGCGCGCGAAGACCGCTTCGACTACCTGCTGATCGAATCGACCGGCGTGGCCGAGCCGCTGCCCATCGCCGA
GACCTTCACCTTCGAGGATGCCGAAGGCCGGCTGCTGTCCGACCTGGCCCGGCTCGACACCATGGTGACGGTGGTCGACG
CCCAGCACTTCCTGGCCGACTACGACGCCGCCGACTTCCTCGCCGACCGCGGCCAGGCCCGCGACGAGGACGATGACCGC
ACCGTGGTCGACCTGCTGATCGAGCAGGTCGAGTTCTGCGACGTGATCGTGCTCAACAAGACCGACCTGGTGGACGAAGC
CGAGCGCGAGCGGCTGGCCGGCATCCTGCATTCGCTGAACCCGCGCGCGCGCATCCTGCCGGCGTCGTTCGGCCACGTGC
CGCTGGACGCGATCCTGAACACCCACCGCTTCGATTTCGACGCCGCCGCCGCCGCGCCCGCGTGGCTGGCCGAACTGCGC
GGCGAACACGTGGCCGAGACCGAAGCGCTCGGCATCCGCAGCTTCGTCTACCGCCGCCGCCGGCCCTTCCACCCGCAGCG
CCTGTGGGACCTGATGCATACCGAATGGCTGCGCGAGCACGGCCGCGTGCTGCGCTCCAAGGGCTACTTCTGGCTGGCGC
CGCGCATGGACGTGGCCGGCAGCTGGGGGCAGGCCGGCGGCGTGATGCGCCACGGCGGCGCCGGTGCCTGGTGGGCCGCC
GTCGACACGGCCGAATGGCCCGACGAGGACGAAGCCCGTACCGACATCGCCGACAAGATGCTCGACAACGGCGCGCCCGC
GCCGTGGGGCGACCGCCGCCAGGAACTGGTCTTCATCGGCATCGACCTGGACGAGGCCGCGCTGGCGGCGAGCCTGGACG
CCTGCCTGCTGACCGACGCCGAATTCGCCGCCGGCCCCGCGGCCTGGGCCGAGCTGCCCGACCCGTTCCCCGACTGGGGC
TTCGACGACAACCACGGCGAAGCGGAAGACGACCACGCGCACGGCGACGACTGCGACTGCGGTCATCCCCACTAA

Upstream 100 bases:

>100_bases
CGACTGACGTGCTCGTCGACCCAGCCTGACCCCGCAGCCCGGTGATCGCCGGGCTGTTTGCTTTGTAGGCACTGCCATGA
CTCGACCCCTTCCCGTCACC

Downstream 100 bases:

>100_bases
ATCGGGGTTGCCCCCGCTTCACCAGCATTGACACCGGTGTCGCCCGGTCCCGACAATCCCCCGAGCGCTTGAACACGTTT
TAACATTTCGGGGAGTCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: P47K [H]

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MLSGFLGAGKTTLLNHVLANREGKRVAVIVNDLSDVNIDAQLVGDGTATSAQLSRTDERMVELSNGCICCTLREDLLDEI
ARLAREDRFDYLLIESTGVAEPLPIAETFTFEDAEGRLLSDLARLDTMVTVVDAQHFLADYDAADFLADRGQARDEDDDR
TVVDLLIEQVEFCDVIVLNKTDLVDEAERERLAGILHSLNPRARILPASFGHVPLDAILNTHRFDFDAAAAAPAWLAELR
GEHVAETEALGIRSFVYRRRRPFHPQRLWDLMHTEWLREHGRVLRSKGYFWLAPRMDVAGSWGQAGGVMRHGGAGAWWAA
VDTAEWPDEDEARTDIADKMLDNGAPAPWGDRRQELVFIGIDLDEAALAASLDACLLTDAEFAAGPAAWAELPDPFPDWG
FDDNHGEAEDDHAHGDDCDCGHPH

Sequences:

>Translated_424_residues
MLSGFLGAGKTTLLNHVLANREGKRVAVIVNDLSDVNIDAQLVGDGTATSAQLSRTDERMVELSNGCICCTLREDLLDEI
ARLAREDRFDYLLIESTGVAEPLPIAETFTFEDAEGRLLSDLARLDTMVTVVDAQHFLADYDAADFLADRGQARDEDDDR
TVVDLLIEQVEFCDVIVLNKTDLVDEAERERLAGILHSLNPRARILPASFGHVPLDAILNTHRFDFDAAAAAPAWLAELR
GEHVAETEALGIRSFVYRRRRPFHPQRLWDLMHTEWLREHGRVLRSKGYFWLAPRMDVAGSWGQAGGVMRHGGAGAWWAA
VDTAEWPDEDEARTDIADKMLDNGAPAPWGDRRQELVFIGIDLDEAALAASLDACLLTDAEFAAGPAAWAELPDPFPDWG
FDDNHGEAEDDHAHGDDCDCGHPH
>Mature_424_residues
MLSGFLGAGKTTLLNHVLANREGKRVAVIVNDLSDVNIDAQLVGDGTATSAQLSRTDERMVELSNGCICCTLREDLLDEI
ARLAREDRFDYLLIESTGVAEPLPIAETFTFEDAEGRLLSDLARLDTMVTVVDAQHFLADYDAADFLADRGQARDEDDDR
TVVDLLIEQVEFCDVIVLNKTDLVDEAERERLAGILHSLNPRARILPASFGHVPLDAILNTHRFDFDAAAAAPAWLAELR
GEHVAETEALGIRSFVYRRRRPFHPQRLWDLMHTEWLREHGRVLRSKGYFWLAPRMDVAGSWGQAGGVMRHGGAGAWWAA
VDTAEWPDEDEARTDIADKMLDNGAPAPWGDRRQELVFIGIDLDEAALAASLDACLLTDAEFAAGPAAWAELPDPFPDWG
FDDNHGEAEDDHAHGDDCDCGHPH

Specific function: The presence of P47K is critical for the expression of the nitrile hydratase genes. May stabilize or activate the nitrile hydratase proteins [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=247, Percent_Identity=33.6032388663968, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI126722884, Length=247, Percent_Identity=33.1983805668016, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI146231952, Length=247, Percent_Identity=33.1983805668016, Blast_Score=119, Evalue=8e-27,
Organism=Homo sapiens, GI148727351, Length=247, Percent_Identity=32.7935222672065, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI223941776, Length=241, Percent_Identity=33.195020746888, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI223941779, Length=248, Percent_Identity=33.0645161290323, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI119120938, Length=144, Percent_Identity=38.1944444444444, Blast_Score=89, Evalue=8e-18,
Organism=Escherichia coli, GI87082430, Length=381, Percent_Identity=29.3963254593176, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1788499, Length=111, Percent_Identity=34.2342342342342, Blast_Score=67, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6324356, Length=231, Percent_Identity=27.2727272727273, Blast_Score=91, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 46898; Mature: 46898

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSGFLGAGKTTLLNHVLANREGKRVAVIVNDLSDVNIDAQLVGDGTATSAQLSRTDERM
CCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHH
VELSNGCICCTLREDLLDEIARLAREDRFDYLLIESTGVAEPLPIAETFTFEDAEGRLLS
HHHCCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEECCCCCHHHH
DLARLDTMVTVVDAQHFLADYDAADFLADRGQARDEDDDRTVVDLLIEQVEFCDVIVLNK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCEEEECC
TDLVDEAERERLAGILHSLNPRARILPASFGHVPLDAILNTHRFDFDAAAAAPAWLAELR
CCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHC
GEHVAETEALGIRSFVYRRRRPFHPQRLWDLMHTEWLREHGRVLRSKGYFWLAPRMDVAG
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC
SWGQAGGVMRHGGAGAWWAAVDTAEWPDEDEARTDIADKMLDNGAPAPWGDRRQELVFIG
CCCCCCCCEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
IDLDEAALAASLDACLLTDAEFAAGPAAWAELPDPFPDWGFDDNHGEAEDDHAHGDDCDC
ECCCHHHHHHHHHHHHCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GHPH
CCCC
>Mature Secondary Structure
MLSGFLGAGKTTLLNHVLANREGKRVAVIVNDLSDVNIDAQLVGDGTATSAQLSRTDERM
CCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHH
VELSNGCICCTLREDLLDEIARLAREDRFDYLLIESTGVAEPLPIAETFTFEDAEGRLLS
HHHCCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEECCCCCHHHH
DLARLDTMVTVVDAQHFLADYDAADFLADRGQARDEDDDRTVVDLLIEQVEFCDVIVLNK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCEEEECC
TDLVDEAERERLAGILHSLNPRARILPASFGHVPLDAILNTHRFDFDAAAAAPAWLAELR
CCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHC
GEHVAETEALGIRSFVYRRRRPFHPQRLWDLMHTEWLREHGRVLRSKGYFWLAPRMDVAG
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC
SWGQAGGVMRHGGAGAWWAAVDTAEWPDEDEARTDIADKMLDNGAPAPWGDRRQELVFIG
CCCCCCCCEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
IDLDEAALAASLDACLLTDAEFAAGPAAWAELPDPFPDWGFDDNHGEAEDDHAHGDDCDC
ECCCHHHHHHHHHHHHCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GHPH
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2013568 [H]